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PDB: 89472 results

7MTU
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BU of 7mtu by Molmil
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P221
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, INOSINIC ACID, ...
Authors:Kim, Y, Maltseva, N, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-05-13
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P221
To Be Published
1TRW
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BU of 1trw by Molmil
THE HIGH-RESOLUTION THREE-DIMENSIONAL SOLUTION STRUCTURES OF THE OXIDIZED AND REDUCED STATES OF HUMAN THIOREDOXIN
Descriptor: THIOREDOXIN
Authors:Clore, G.M, Qin, J, Gronenborn, A.M.
Deposit date:1994-05-10
Release date:1994-09-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The high-resolution three-dimensional solution structures of the oxidized and reduced states of human thioredoxin.
Structure, 2, 1994
3KNE
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BU of 3kne by Molmil
Carbonic Anhydrase II H64C mutant in complex with an in situ formed triazole
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, Carbonic anhydrase 2, N-[(S)-(1-{2-oxo-2-[(3-sulfanylpropyl)amino]ethyl}-1H-1,2,3-triazol-5-yl)(phenyl)methyl]-4-sulfamoylbenzamide, ...
Authors:Schulze-Wischeler, J, Heine, A, Klebe, G.
Deposit date:2009-11-12
Release date:2011-05-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Stereo- and Regioselective Azide/Alkyne Cycloadditions in Carbonic Anhydrase II via Tethering, Monitored by Crystallography and Mass Spectrometry.
Chemistry, 17, 2011
5MSB
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BU of 5msb by Molmil
Crystal structure of human carbonic anhydrase isozyme XII with 2,3,5,6-tetrafluoro-4[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
Descriptor: 1,2-ETHANEDIOL, 2,3,5,6-tetrafluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 12, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2017-01-02
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding.
PeerJ, 6, 2018
6OPN
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BU of 6opn by Molmil
CD4- and 17-bound HIV-1 Env B41 SOSIP in complex with small molecule GO35
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2019-04-25
Release date:2020-10-21
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A Strain-Specific Inhibitor of Receptor-Bound HIV-1 Targets a Pocket near the Fusion Peptide.
Cell Rep, 33, 2020
6OQA
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BU of 6oqa by Molmil
Crystal structure of CEP250 bound to FKBP12 in the presence of FK506-like novel natural product
Descriptor: (3R,4E,7E,10R,11S,12R,13S,16R,17R,24aS)-11,17-dihydroxy-10,12,16-trimethyl-3-[(2R)-1-phenylbutan-2-yl]-6,9,10,11,12,13,14,15,16,17,22,23,24,24a-tetradecahydro-3H-13,17-epoxypyrido[2,1-c][1,4]oxazacyclohenicosine-1,18,19(21H)-trione, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ...
Authors:Lee, S.-J, Shigdel, U.K, Townson, S.A, Verdine, G.L.
Deposit date:2019-04-26
Release date:2020-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Genomic discovery of an evolutionarily programmed modality for small-molecule targeting of an intractable protein surface.
Proc.Natl.Acad.Sci.USA, 117, 2020
6S59
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BU of 6s59 by Molmil
Structure of ovine transhydrogenase in the apo state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Nicotinamide nucleotide transhydrogenase
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2019-07-01
Release date:2019-08-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and mechanism of mitochondrial proton-translocating transhydrogenase.
Nature, 573, 2019
6XM5
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BU of 6xm5 by Molmil
Structure of SARS-CoV-2 spike at pH 5.5, all RBDs down
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D.
Deposit date:2020-06-29
Release date:2020-07-29
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains.
Cell Host Microbe, 28, 2020
5M6D
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BU of 5m6d by Molmil
Streptococcus pneumoniae Glyceraldehyde-3-Phosphate Dehydrogenase (SpGAPDH) crystal structure
Descriptor: ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Gaboriaud, C, Moreau, C.P, Di Guilmi, A.M.
Deposit date:2016-10-25
Release date:2017-01-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Deciphering Key Residues Involved in the Virulence-promoting Interactions between Streptococcus pneumoniae and Human Plasminogen.
J. Biol. Chem., 292, 2017
2N4B
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BU of 2n4b by Molmil
EC-NMR Structure of Ralstonia metallidurans Rmet_5065 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target CrR115
Descriptor: Uncharacterized protein
Authors:Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-06-17
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
5M6S
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BU of 5m6s by Molmil
folding intermediate of spectrin R16
Descriptor: spectrin
Authors:Nilsson, O.B, Nickson, A.A, Clarke, J.
Deposit date:2016-10-25
Release date:2017-01-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cotranslational folding of spectrin domains via partially structured states.
Nat. Struct. Mol. Biol., 24, 2017
7QHA
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BU of 7qha by Molmil
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in amphipol
Descriptor: Megabody c7HopQ, Putative TRAP-type C4-dicarboxylate transport system, large permease component, ...
Authors:North, R.A, Davies, J.S, Morado, D, Dobson, R.C.J.
Deposit date:2021-12-11
Release date:2022-12-21
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter.
Nat Commun, 14, 2023
7MJS
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BU of 7mjs by Molmil
Single-Particle Cryo-EM Structure of Major Facilitator Superfamily Domain containing 2A in complex with LPC-18:3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2AG3 Fab heavy chain, 2AG3 Fab light chain, ...
Authors:Cater, R.J, Chua, G.L, Erramilli, S.K, Keener, J.E, Choy, B.C, Tokarz, P, Chin, C.F, Quek, D.Q.Y, Kloss, B, Pepe, J.G, Parisi, G, Wong, B.H, Clarke, O.B, Marty, M.T, Kossiakoff, A.A, Khelashvili, G, Silver, D.L, Mancia, F.
Deposit date:2021-04-20
Release date:2021-06-16
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural basis of omega-3 fatty acid transport across the blood-brain barrier.
Nature, 595, 2021
8TTO
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BU of 8tto by Molmil
Structure of Hachiman anti-defense 1 (Had1)
Descriptor: Hachiman
Authors:Ragucci, A.E, Antine, S.P, Kranzusch, P.J.
Deposit date:2023-08-14
Release date:2023-11-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
2N3M
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BU of 2n3m by Molmil
G-quadruplex structure of an anti-proliferative DNA sequence
Descriptor: DNA_(28-MER)
Authors:Do, N.Q, Chung, W.J, Truong, T.H.A, Heddi, B, Phan, A.T.
Deposit date:2015-06-05
Release date:2016-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:G-quadruplex structure of an anti-proliferative DNA sequence
To be Published
6Z8G
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BU of 6z8g by Molmil
Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.
Descriptor: BROMIDE ION, SULFATE ION, Variant surface glycoprotein MITat 1.13, ...
Authors:Stebbins, C.E, Hempelmann, A, Van Straaten, M, Zeelen, J.
Deposit date:2020-06-02
Release date:2021-03-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of trypanosome coat protein VSGsur and function in suramin resistance.
Nat Microbiol, 6, 2021
6XCF
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BU of 6xcf by Molmil
Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with noncovalent inhibitor 59
Descriptor: (3R)-3-(2,4-dichlorophenyl)-N~1~-hydroxy-N~5~-pentylpentanediamide, Botulinum neurotoxin type A, ZINC ION
Authors:Tararina, M.A, Allen, K.N.
Deposit date:2020-06-08
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Catch and Anchor Approach To Combat Both Toxicity and Longevity of Botulinum Toxin A.
J.Med.Chem., 63, 2020
6B4J
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BU of 6b4j by Molmil
Crystal structure of human Gle1 CTD-Nup42 GBM-DDX19B(AMPPNP) complex
Descriptor: ATP-dependent RNA helicase DDX19B, MAGNESIUM ION, Nucleoporin GLE1, ...
Authors:Lin, D.H, Correia, A.R, Cai, S.W, Huber, F.M, Jette, C.A, Hoelz, A.
Deposit date:2017-09-26
Release date:2018-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and functional analysis of mRNA export regulation by the nuclear pore complex.
Nat Commun, 9, 2018
2IF2
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BU of 2if2 by Molmil
Crystal Structure of the Putative Dephospho-CoA Kinase from Aquifex aeolicus, Northeast Structural Genomics Target QR72.
Descriptor: 1,2-ETHANEDIOL, Dephospho-CoA kinase, SULFATE ION
Authors:Forouhar, F, Hussain, M, Seetharaman, J, Hussain, A, Wu, M, Fang, Y, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M, Rost, B, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:

6UHL
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BU of 6uhl by Molmil
Crystal Structure of C148 mGFP-scDNA-1
Descriptor: C148 mGFP-scDNA-1, UNKNOWN LIGAND
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
4L69
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BU of 4l69 by Molmil
Rv2372c of Mycobacterium tuberculosis is RsmE like methyltransferse
Descriptor: Ribosomal RNA small subunit methyltransferase E
Authors:Kumar, A, Taneja, B.
Deposit date:2013-06-12
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of Rv2372c identifies an RsmE-like methyltransferase from Mycobacterium tuberculosis
Acta Crystallogr.,Sect.D, 70, 2014
8TYQ
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BU of 8tyq by Molmil
Structure of the C-terminal half of LRRK2 bound to GZD-824 (G2019S mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, Designed Ankyrin Repeats Protein E11, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-25
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
6RMU
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BU of 6rmu by Molmil
Crystal structure of disulphide-linked human C3d dimer in complex with Staphylococcus aureus complement subversion protein Sbi-IV
Descriptor: 1,2-ETHANEDIOL, Complement C3, DI(HYDROXYETHYL)ETHER, ...
Authors:Wahid, A.A, van den Elsen, J.M.H, Crennell, S.J.
Deposit date:2019-05-07
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Staphylococcal Complement Evasion Protein Sbi Stabilises C3d Dimers by Inducing an N-Terminal Helix Swap
Front Immunol, 13, 2022
8TZF
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BU of 8tzf by Molmil
Structure of full length LRRK2 bound to GZD-824 (I2020T mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2, ...
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
8TZH
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BU of 8tzh by Molmil
Structure of full-length LRRK2 bound to MLi-2 (I2020T mutant)
Descriptor: (2~{R},6~{S})-2,6-dimethyl-4-[6-[5-(1-methylcyclopropyl)oxy-1~{H}-indazol-3-yl]pyrimidin-4-yl]morpholine, E11 DARPin, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sanz-Murillo, M, Villagran-Suarez, A, Alegrio Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023

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數據於2024-10-16公開中

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