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PDB: 89346 results

5MDB
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BU of 5mdb by Molmil
The structure of the mature HIV-1 CA hexameric lattice with curvature parameters: tilt=17, twist=-6
Descriptor: Gag protein
Authors:Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G.
Deposit date:2016-11-10
Release date:2016-12-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:The structure and flexibility of conical HIV-1 capsids determined within intact virions.
Science, 354, 2016
5G12
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BU of 5g12 by Molmil
Pseudomonas aeruginosa HDAH (Y313F) unliganded.
Descriptor: HDAH, POTASSIUM ION, ZINC ION
Authors:Kraemer, A, Meyer-Almes, F.J, Yildiz, O.
Deposit date:2016-03-23
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal Structure of a Histone Deacetylase Homologue from Pseudomonas aeruginosa.
Biochemistry, 55, 2016
1AEM
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BU of 1aem by Molmil
SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZO[1,2-A]PYRIDINE)
Descriptor: CYTOCHROME C PEROXIDASE, IMIDAZO[1,2-A]PYRIDINE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Musah, R.A, Jensen, G.M, Fitzgerald, M.M, Mcree, D.E, Goodin, D.B.
Deposit date:1997-02-25
Release date:1997-09-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Artificial protein cavities as specific ligand-binding templates: characterization of an engineered heterocyclic cation-binding site that preserves the evolved specificity of the parent protein.
J.Mol.Biol., 315, 2002
5MD8
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BU of 5md8 by Molmil
The structure of the mature HIV-1 CA hexameric lattice with curvature parameters: tilt=17, twist=12
Descriptor: Gag protein
Authors:Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G.
Deposit date:2016-11-10
Release date:2016-12-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:The structure and flexibility of conical HIV-1 capsids determined within intact virions.
Science, 354, 2016
6XLB
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BU of 6xlb by Molmil
Apo full-length Hsc82 in complex with Aha1
Descriptor: ATP-dependent molecular chaperone HSC82, Hsp90 co-chaperone AHA1
Authors:Liu, Y.X, Sun, M, Myasnikov, A.G, Elnatan, D, Agard, D.A.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Apo full-length Hsc82 in complex with Aha1
To Be Published
6ROI
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BU of 6roi by Molmil
Cryo-EM structure of the partially activated Drs2p-Cdc50p
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Timcenko, M, Lyons, J.A, Januliene, D, Ulstrup, J.J, Dieudonne, T, Montigny, C, Ash, M.R, Karlsen, J.L, Boesen, T, Kuhlbrandt, W, Lenoir, G, Moeller, A, Nissen, P.
Deposit date:2019-05-13
Release date:2019-07-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure and autoregulation of a P4-ATPase lipid flippase.
Nature, 571, 2019
7YK3
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BU of 7yk3 by Molmil
Crystal structure of DarTG toxin-antitoxin complex from Mycobacterium tuberculosis
Descriptor: DNA ADP-ribosyl glycohydrolase, DNA ADP-ribosyl transferase, PHOSPHATE ION
Authors:Deep, A, Kaur, J, Singh, L, Thakur, K.G.
Deposit date:2022-07-21
Release date:2023-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into DarT toxin neutralization by cognate DarG antitoxin: ssDNA mimicry by DarG C-terminal domain keeps the DarT toxin inhibited.
Structure, 31, 2023
6S1F
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BU of 6s1f by Molmil
Structure of the kinase domain of human RIPK2 in complex with the inhibitor CSLP3
Descriptor: Receptor-interacting serine/threonine-protein kinase 2, ~{N}-[3-[2-azanyl-5-(4-piperazin-1-ylphenyl)pyridin-3-yl]-5-methoxy-phenyl]methanesulfonamide
Authors:Pinkas, D.M, Bufton, J.C, Kupinska, K, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2019-06-18
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Design of 3,5-diaryl-2-aminopyridines as receptor-interacting protein kinase 2 (RIPK2) and nucleotide-binding oligomerization domain (NOD) cell signaling inhibitors
To be published
6S2V
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BU of 6s2v by Molmil
Structure of the N-terminal catalytic region of T. thermophilus Rel
Descriptor: (P)ppGpp synthetase I, SpoT/RelA, CHLORIDE ION, ...
Authors:Garcia-Pino, A.
Deposit date:2019-06-22
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes.
Nat.Chem.Biol., 16, 2020
3LOR
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BU of 3lor by Molmil
The Crystal Structure of a Thiol-disulfide Isomerase from Corynebacterium glutamicum to 2.2A
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Stein, A.J, Osipiuk, J, Weger, A, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-02-04
Release date:2010-03-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of a Thiol-disulfide Isomerase from Corynebacterium glutamicum to 2.2A
To be Published
6E87
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BU of 6e87 by Molmil
Crystal structure of ferrous form of the crosslinked human cysteine dioxygenase in the anaerobic condition
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ...
Authors:Liu, A, Li, J.
Deposit date:2018-07-27
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Probing the Cys-Tyr Cofactor Biogenesis in Cysteine Dioxygenase by the Genetic Incorporation of Fluorotyrosine.
Biochemistry, 58, 2019
8Q5N
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BU of 8q5n by Molmil
Apo form of restriction endonuclease NhoI.
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Restriction endonuclease (NhoI)
Authors:Rafalski, D, Krakowska, A, Bochtler, M.
Deposit date:2023-08-09
Release date:2024-07-17
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 52, 2024
8AXJ
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BU of 8axj by Molmil
Crystal structure of the N-terminal domain of Trypanosoma brucei CFAP410
Descriptor: Chains: A, GLYCEROL, PHOSPHATE ION
Authors:Dong, G, Stadler, A.
Deposit date:2022-08-31
Release date:2023-09-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural studies of cilia and flagella associated protein 410 (CFAP410) reveal its bimodular organization with an N-terminal LRR motif and a C-terminal tetrameric helical bundle
To Be Published
6P3V
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BU of 6p3v by Molmil
Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT416
Descriptor: DIMETHYL SULFOXIDE, N,N-diethyl-2-[(8-fluoro-5-methyl-5H-[1,2,4]triazino[5,6-b]indol-3-yl)sulfanyl]ethan-1-amine, N-acetyltransferase Eis, ...
Authors:Punetha, A, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2019-05-24
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Probing the Robustness of Inhibitors of Tuberculosis Aminoglycoside Resistance Enzyme Eis by Mutagenesis.
Acs Infect Dis., 5, 2019
4QTX
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BU of 4qtx by Molmil
Caspase-3 Y195A
Descriptor: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, ACETATE ION, Caspase-3
Authors:Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C.
Deposit date:2014-07-09
Release date:2014-11-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.974 Å)
Cite:Modifying caspase-3 activity by altering allosteric networks.
Biochemistry, 53, 2014
8V4I
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BU of 8v4i by Molmil
Structure of bovine anti-HIV Fab ElsE1
Descriptor: ElsE1 Fab heavy chain, ElsE1 Fab light chain
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2023-11-29
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultra-long CDRH3 repertoire
To Be Published
4Y2H
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BU of 4y2h by Molmil
Crystal structure of human protein arginine methyltransferase PRMT6 bound to SAH and an aryl pyrazole inhibitor
Descriptor: GLYCEROL, N-{[5-(4-fluorophenyl)-1H-pyrazol-4-yl]methyl}-N-methylethane-1,2-diamine, Protein arginine N-methyltransferase 6, ...
Authors:Swinger, K.K, Boriack-Sjodin, P.A.
Deposit date:2015-02-09
Release date:2015-04-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Aryl Pyrazoles as Potent Inhibitors of Arginine Methyltransferases: Identification of the First PRMT6 Tool Compound.
Acs Med.Chem.Lett., 6, 2015
4ENM
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BU of 4enm by Molmil
Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-benzylguanine
Descriptor: Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*AP*TP*GP*(BZG)P*CP*TP*AP*GP*TP*A)-3')
Authors:Tubbs, J.L, Arvai, A.S, Tainer, J.A.
Deposit date:2012-04-13
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8402 Å)
Cite:Atl1 Regulates Choice between Global Genome and Transcription-Coupled Repair of O(6)-Alkylguanines.
Mol.Cell, 47, 2012
3LRL
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BU of 3lrl by Molmil
Structure of alfa-galactosidase (MEL1) from Saccharomyces cerevisiae with melibiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fernandez-Leiro, R, Pereira-Rodriguez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J.
Deposit date:2010-02-11
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analysis of Saccharomyces cerevisiae alpha-galactosidase and its complexes with natural substrates reveals new insights into substrate specificity of GH27 glycosidases.
J.Biol.Chem., 285, 2010
5FPV
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BU of 5fpv by Molmil
Crystal structure of human JMJD2A in complex with compound KDOAM20A
Descriptor: 2-{[(2-{[(E)-2-(dimethylamino)ethenyl](ethyl)amino}-2-oxoethyl)amino]methyl}pyridine-4-carboxylic acid, LYSINE-SPECIFIC DEMETHYLASE 4A, MANGANESE (II) ION, ...
Authors:Srikannathasan, V, Gileadi, C, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.
Deposit date:2015-12-03
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural Analysis of Human Kdm5B Guides Histone Demethylase Inhibitor Development.
Nat.Chem.Biol., 12, 2016
3LU6
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BU of 3lu6 by Molmil
Human serum albumin in complex with compound 1
Descriptor: Serum albumin, [(1R,2R)-2-{[(5-fluoro-1H-indol-2-yl)carbonyl]amino}-2,3-dihydro-1H-inden-1-yl]acetic acid
Authors:Buttar, D, Colclough, N, Gerhardt, S, MacFaul, P.A, Phillips, S.D, Plowright, A, Whittamore, P, Tam, K, Maskos, K, Steinbacher, S, Steuber, H.
Deposit date:2010-02-17
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A combined spectroscopic and crystallographic approach to probing drug-human serum albumin interactions
Bioorg.Med.Chem., 18, 2010
8MSI
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BU of 8msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SQ44T
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6S7C
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BU of 6s7c by Molmil
Crystal structure of CARM1 in complex with inhibitor UM079
Descriptor: 1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azanylpropyl)amino]propyl]guanidine, Histone-arginine methyltransferase CARM1
Authors:Gunnell, E.A, Muhsen, U, Dowden, J, Dreveny, I.
Deposit date:2019-07-04
Release date:2020-03-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical evaluation of bisubstrate inhibitors of protein arginine N-methyltransferases PRMT1 and CARM1 (PRMT4).
Biochem.J., 477, 2020
8GH7
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BU of 8gh7 by Molmil
142D6 bound to BIR3-XIAP
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, BIR3 inhibitor MAA-CHG-PRO-ZHW, E3 ubiquitin-protein ligase XIAP, ...
Authors:Garza-Granados, A, McGuire, J, Baggio, C, Pellecchia, M, Pegan, S.D.
Deposit date:2023-03-09
Release date:2023-07-05
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization of a Potent and Orally Bioavailable Lys-Covalent Inhibitor of Apoptosis Protein (IAP) Antagonist.
J.Med.Chem., 66, 2023
1A5M
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BU of 1a5m by Molmil
K217A VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998

225946

数据于2024-10-09公开中

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