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PDB: 88675 results

8FYV
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BU of 8fyv by Molmil
Salmonella enterica serovar Typhimurium chemoreceptor Tsr (taxis to serine and repellents) ligand-binding domain in complex with l-serine
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein, SERINE, ...
Authors:Baylink, A, Gentry-Lear, Z, Glenn, S.
Deposit date:2023-01-26
Release date:2024-05-15
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacterial vampirism mediated through taxis to serum.
Elife, 12, 2024
8C8M
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BU of 8c8m by Molmil
In vitro structure of the Nitrosopumilus maritimus S-layer - Composite map between two and six-fold symmetrised
Descriptor: Cell surface protein
Authors:von Kuegelgen, A, Bharat, T.
Deposit date:2023-01-20
Release date:2024-04-10
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Membraneless channels sieve cations in ammonia-oxidizing marine archaea.
Nature, 630, 2024
7QVE
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BU of 7qve by Molmil
Spinach 20S proteasome
Descriptor: Proteasome subunit alpha type, Proteasome subunit alpha type-3, Proteasome subunit beta, ...
Authors:Kandolf, S, Grishkovskaya, I, Meinhart, A, Haselbach, D.
Deposit date:2022-01-21
Release date:2022-05-25
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the plant 26S proteasome.
Plant Commun., 3, 2022
5N8P
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BU of 5n8p by Molmil
S-layer protein RsaA from C. crescentus
Descriptor: CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2017-02-24
Release date:2017-04-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the hexagonal surface layer on Caulobacter crescentus cells.
Nat Microbiol, 2, 2017
7O6E
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BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
6PNL
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BU of 6pnl by Molmil
Structure of Epimerase Mth375 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Carbone, V, Schofield, L.R, Sutherland-Smith, A.J, Ronimus, R.S.
Deposit date:2019-07-02
Release date:2020-07-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of a UDP-GALE 4-epimerase (Mth375) from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
To Be Published
8FK0
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BU of 8fk0 by Molmil
Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Descriptor: Pilin_N domain-containing protein
Authors:Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H.
Deposit date:2022-12-20
Release date:2023-06-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CGA
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BU of 8cga by Molmil
Structure of Mycobacterium tuberculosis dUTPase delta 133A-137S mutant
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Toth, Z.S, Benedek, A, Leveles, I, Vertessy, B.G.
Deposit date:2023-02-03
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of Mycobacterium tuberculosis dUTPase delta 133A-137S mutant
To Be Published
6V7D
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BU of 6v7d by Molmil
Human Arginase1 Complexed with Bicyclic Inhibitor Compound 10
Descriptor: Arginase-1, MANGANESE (II) ION, {3-[(3aR,4R,5S,6aR)-4-azaniumyl-4-carboxyoctahydrocyclopenta[b]pyrrol-1-ium-5-yl]propyl}(trihydroxy)borate(1-)
Authors:Palte, R.L, Lesburg, C.A.
Deposit date:2019-12-08
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Discovery and Optimization of Rationally Designed Bicyclic Inhibitors of Human Arginase to Enhance Cancer Immunotherapy.
Acs Med.Chem.Lett., 11, 2020
8CHA
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BU of 8cha by Molmil
Fc gamma RIIa 27W/131H variant ectodomain
Descriptor: 1,2-DIMETHOXYETHANE, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, 3,6,9,12,15,18-HEXAOXAICOSANE, ...
Authors:Foy, E.G, Thomsen, M, Goldman, A, Robinson, J.I.
Deposit date:2023-02-07
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Fc gamma RIIa 27W/131H variant ectodomain
To Be Published
6YMQ
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BU of 6ymq by Molmil
TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Single-chain variable 4, ...
Authors:Szykowska, A, Preger, C, Scacioc, A, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Davis, J.B, Burgess-Brown, N, Bullock, A.
Deposit date:2020-04-09
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
5NMK
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BU of 5nmk by Molmil
HLA A02 presenting SLFNTIAVL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-06
Release date:2017-11-15
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
7NS9
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BU of 7ns9 by Molmil
Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with triphosphate and calcium
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Vogt, M.S, Essen, L.-O, Banerjee, A.
Deposit date:2021-03-05
Release date:2021-06-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7BWX
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BU of 7bwx by Molmil
Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus.
Descriptor: GLYCEROL, Ice-binding protein isoform1a, SULFATE ION
Authors:Yamauchi, A, Arai, T, Kondo, H, Tsuda, S.
Deposit date:2020-04-16
Release date:2020-05-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes.
Biomolecules, 10, 2020
6Y1S
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BU of 6y1s by Molmil
Bicyclic peptide bp70 in I4132 at 1.0 Angstrom resolution
Descriptor: bp70
Authors:Baeriswyl, S, Stocker, A, Reymond, J.-L.
Deposit date:2020-02-13
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A mixed chirality alpha-helix in a stapled bicyclic and a linear antimicrobial peptide revealed by X-ray crystallography.
Rsc Chem Biol, 2, 2021
7NUZ
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BU of 7nuz by Molmil
Proteinase K structure at atomic resolution from crystals grown in agarose gel
Descriptor: GLYCEROL, MAGNESIUM ION, NITRATE ION, ...
Authors:Gavira, J.A, Artusio, F, Castellvi, A, Pisano, R.
Deposit date:2021-03-15
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Tuning Transport Phenomena in Agarose Gels for the Control of Protein Nucleation Density and Crystal Form
Crystals, 2021
6MZN
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BU of 6mzn by Molmil
Zebrafish betaglycan orphan domain structure from tetragonal crystal form
Descriptor: Transforming growth factor beta receptor III
Authors:Hinck, A.P, Kim, S.
Deposit date:2018-11-05
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural Adaptation in Its Orphan Domain Engenders Betaglycan with an Alternate Mode of Growth Factor Binding Relative to Endoglin.
Structure, 27, 2019
6V78
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BU of 6v78 by Molmil
OmpK37 porin
Descriptor: OmpK37
Authors:Rocker, A, Lithgow, T.
Deposit date:2019-12-08
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Global Trends in Proteome Remodeling of the Outer Membrane Modulate Antimicrobial Permeability in Klebsiella pneumoniae.
Mbio, 11, 2020
6V6Z
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BU of 6v6z by Molmil
Crystal structure of N-[(4-methoxyphenyl)sulfonyl]-N-(4-{[(4-methoxyphenyl)sulfonyl]amino}naphthalen-1-yl)glycine bound to human Keap1 Kelch domain
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DITHIANE DIOL, FORMIC ACID, ...
Authors:Lazzara, P.R, David, B.P, Ankireddy, A, Richardson, B.G, Dye, K, Ratia, K.M, Reddy, S.P, Moore, T.W.
Deposit date:2019-12-06
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synthesis and Evaluation of Noncovalent Naphthalene-Based KEAP1-NRF2 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
7O0C
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BU of 7o0c by Molmil
Human phosphomannomutase 2 (PMM2) wild-type in apo state
Descriptor: CHLORIDE ION, MAGNESIUM ION, Phosphomannomutase 2, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-03-26
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
7SSJ
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BU of 7ssj by Molmil
Crystal structure of the DesK-DesR complex in the phosphatase state
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Trajtenberg, F, Buschiazzo, A.
Deposit date:2021-11-11
Release date:2022-11-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:An allosteric switch ensures efficient unidirectional information transmission by the histidine kinase DesK from Bacillus subtilis.
Sci.Signal., 16, 2023
7Q0T
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BU of 7q0t by Molmil
Lysozyme soaked with V(IV)OSO4
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
Deposit date:2021-10-16
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
7O5Z
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BU of 7o5z by Molmil
Human phosphomannomutase 2 (PMM2) with mutation T237M in apo state
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-04-09
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
6FUZ
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BU of 6fuz by Molmil
Crystal structure of the TPR domain of KLC1 in complex with the C-terminal peptide of JIP1
Descriptor: GLYCEROL, Kinesin light chain 1,Kinesin light chain 1,C-Jun-amino-terminal kinase-interacting protein 1, nanobody
Authors:Pernigo, S, Dodding, M.P, Steiner, R.A.
Deposit date:2018-02-28
Release date:2018-05-02
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for isoform-specific kinesin-1 recognition of Y-acidic cargo adaptors.
Elife, 7, 2018
8U18
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BU of 8u18 by Molmil
Cryo-EM structure of murine Thrombopoietin receptor ectodomain in complex with Tpo
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombopoietin, Thrombopoietin receptor,GCN4 isoform 1, ...
Authors:Sarson-Lawrence, K.S, Hardy, J.M, Leis, A, Babon, J.J, Kershaw, N.J.
Deposit date:2023-08-30
Release date:2024-02-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the extracellular domain of murine Thrombopoietin Receptor in complex with Thrombopoietin.
Nat Commun, 15, 2024

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