Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89472 results

2VDO
DownloadVisualize
BU of 2vdo by Molmil
Integrin AlphaIIbBeta3 Headpiece Bound to Fibrinogen Gamma chain peptide, HHLGGAKQAGDV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN, ...
Authors:Springer, T.A, Zhu, J, Xiao, T.
Deposit date:2007-10-10
Release date:2008-09-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural Basis for Distinctive Recognition of Fibrinogen Gammac Peptide by the Platelet Integrin Alphaiibbeta3.
J.Cell Biol., 182, 2008
2VFH
DownloadVisualize
BU of 2vfh by Molmil
Crystal structure of the F96W mutant of Plasmodium falciparum triosephosphate isomerase complexed with 3-phosphoglycerate
Descriptor: 3-PHOSPHOGLYCERIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Gayathri, P, Banerjee, M, Vijayalakshmi, A, Balaram, H, Balaram, P, Murthy, M.R.N.
Deposit date:2007-11-04
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and Structural Characterization of Residue 96 Mutants of Plasmodium Falciparum Triosephosphate Isomerase: Active-Site Loop Conformation, Hydration and Identification of a Dimer-Interface Ligand-Binding Site.
Acta Crystallogr.,Sect.D, 65, 2009
7TAO
DownloadVisualize
BU of 7tao by Molmil
Cryo-EM structure of bafilomycin A1 bound to yeast VO V-ATPase
Descriptor: (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
Deposit date:2021-12-21
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
6QJH
DownloadVisualize
BU of 6qjh by Molmil
Cryo-EM structure of heparin-induced 2N4R tau snake filaments
Descriptor: Microtubule-associated protein tau
Authors:Zhang, W, Falcon, B, Murzin, A.G, Fan, J, Crowther, R.A, Goedert, M, Scheres, S.H.W.
Deposit date:2019-01-24
Release date:2019-02-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer's and Pick's diseases.
Elife, 8, 2019
6QJM
DownloadVisualize
BU of 6qjm by Molmil
Cryo-EM structure of heparin-induced 2N4R tau twister filaments
Descriptor: Microtubule-associated protein tau
Authors:Zhang, W, Falcon, B, Murzin, A.G, Fan, J, Crowther, R.A, Goedert, M, Scheres, S.H.W.
Deposit date:2019-01-24
Release date:2019-02-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer's and Pick's diseases.
Elife, 8, 2019
6QJQ
DownloadVisualize
BU of 6qjq by Molmil
Cryo-EM structure of heparin-induced 2N3R tau filaments
Descriptor: Microtubule-associated protein tau
Authors:Zhang, W, Falcon, B, Murzin, A.G, Fan, J, Crowther, R.A, Goedert, M, Scheres, S.H.W.
Deposit date:2019-01-24
Release date:2019-02-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer's and Pick's diseases.
Elife, 8, 2019
6QDK
DownloadVisualize
BU of 6qdk by Molmil
Molecular features of the UNC-45 chaperone critical for binding and folding muscle myosin
Descriptor: UNC-45,UNC-45
Authors:Meinhart, A, Clausen, T, Hellerschmied, D.
Deposit date:2019-01-02
Release date:2019-10-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Molecular features of the UNC-45 chaperone critical for binding and folding muscle myosin.
Nat Commun, 10, 2019
7TDJ
DownloadVisualize
BU of 7tdj by Molmil
Rabbit RyR1 with AMP-PCP and high Ca2+ embedded in nanodisc in closed-inactivated conformation class 1(Dataset-A)
Descriptor: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Ryanodine receptor 1,Ryanodine receptor 1,RyR1, ...
Authors:Nayak, A.R, Samso, M.
Deposit date:2021-12-31
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022
6KMK
DownloadVisualize
BU of 6kmk by Molmil
Crystal structure of hydrogen peroxide bound bovine lactoperoxidase at 2.3 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROGEN PEROXIDE, ...
Authors:Singh, P.K, Sirohi, H.V, Bhusan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2019-07-31
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of hydrogen peroxide bound bovine lactoperoxidase at 2.3 A resolution
To Be Published
6A89
DownloadVisualize
BU of 6a89 by Molmil
Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
Descriptor: 1,2-ETHANEDIOL, 2,6-DIAMINOPIMELIC ACID, GLYCEROL, ...
Authors:Bairagya, H.R, Shokeen, A, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
Deposit date:2018-07-06
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
To Be Published
8T8R
DownloadVisualize
BU of 8t8r by Molmil
Sortilin-PGRN peptide complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Paragranulin peptide, Sortilin, ...
Authors:Srivastava, D.B, Srivastava, A, Cherf, G.M, Low, L.Y, Kannan, G.
Deposit date:2023-06-23
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structural studies of Sortilin-PGRN peptide complex
To Be Published
4WG2
DownloadVisualize
BU of 4wg2 by Molmil
P411BM3-CIS T438S I263F regioselective C-H amination catalyst
Descriptor: Bifunctional P-450/NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Hyster, T.K, Farwell, C.C, Buller, A.R, McIntosh, J.A, Arnold, F.H.
Deposit date:2014-09-17
Release date:2014-11-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Enzyme-controlled nitrogen-atom transfer enables regiodivergent C-h amination.
J.Am.Chem.Soc., 136, 2014
6A9V
DownloadVisualize
BU of 6a9v by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 42 residues deletion)
Descriptor: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6A8I
DownloadVisualize
BU of 6a8i by Molmil
Crystal structure of endo-arabinanase ABN-TS D147N mutant in complex with arabinohexaose
Descriptor: CALCIUM ION, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose, endo-alpha-(1->5)-L-arabinanase
Authors:Yamaguchi, A, Tada, T.
Deposit date:2018-07-09
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of endo-1,5-alpha-L-arabinanase mutants from Bacillus thermodenitrificans TS-3 in complex with arabino-oligosaccharides.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6ABZ
DownloadVisualize
BU of 6abz by Molmil
Crystal Structure of HEWL in deionized water
Descriptor: CHLORIDE ION, Lysozyme C, S-1,2-PROPANEDIOL, ...
Authors:Seyedarabi, A, Seraj, Z.
Deposit date:2018-07-24
Release date:2019-07-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The role of Cinnamaldehyde and Phenyl ethyl alcohol as two types of precipitants affecting protein hydration levels.
Int.J.Biol.Macromol., 146, 2019
6A8U
DownloadVisualize
BU of 6a8u by Molmil
PhoQ sensor domain (wild type): analysis of internal cavity
Descriptor: Sensor protein PhoQ
Authors:Yoshitani, K, Ishii, E, Taniguchi, K, Sugimoto, H, Shiro, Y, Mori, H, Akiyama, Y, Kato, A, Utsumi, R, Eguchi, Y.
Deposit date:2018-07-10
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:Identification of an internal cavity in the PhoQ sensor domain for PhoQ activity and SafA-mediated control.
Biosci. Biotechnol. Biochem., 83, 2019
6ACX
DownloadVisualize
BU of 6acx by Molmil
Crystal structure of Mycobacterium smegmatis Mfd in complex with ADP + Pi at 3.5 A resolution.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Mycobacterium smegmatis Mfd, PHOSPHATE ION, ...
Authors:Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
Deposit date:2018-07-27
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
4UXE
DownloadVisualize
BU of 4uxe by Molmil
Crystal structure of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, P21 selenomethionine crystal
Descriptor: GLYCEROL, LARGE TAIL FIBER PROTEIN P34
Authors:Granell, M, Alvira, S, Garcia-Doval, C, Singh, A.K, van Raaij, M.J.
Deposit date:2014-08-22
Release date:2015-08-19
Last modified:2017-07-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.
Viruses, 9, 2017
4V0G
DownloadVisualize
BU of 4v0g by Molmil
JAK3 in complex with a covalent EGFR inhibitor
Descriptor: N-[3-(2-{3-amino-6-[1-(1-methylpiperidin-4-yl)-1H-pyrazol-4-yl]pyrazin-2-yl}-1H-benzimidazol-1-yl)phenyl]propanamide, TYROSINE-PROTEIN KINASE JAK3
Authors:Debreczeni, J.E, Hennessy, E.J, Chuaquini, C, Ashton, S, Coclough, N, Cross, D.A.E, Eberlein, C, Gingipalli, L, Klinowska, T.C.M, Orme, J.P, Sha, L, Wu, X.
Deposit date:2014-09-16
Release date:2016-01-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Utilisation of Structure Based Design to Identify Novel, Irreversible Inhibitors of the Epidermal Growth Factor Receptor (Egfr) Harboring the Gatekeeper T790M Mutation
To be Published
6ALL
DownloadVisualize
BU of 6all by Molmil
Crystal structure of a predicted ferric/iron (III) hydroxymate siderophore substrate binding protein from Bacillus anthracis
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Fe(3+)-citrate-binding protein yfmC
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-08-08
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of a predicted ferric/iron (III) hydroxymate siderophore substrate binding protein from Bacillus anthracis
To Be Published
6K1R
DownloadVisualize
BU of 6k1r by Molmil
Crystal structure of Ketopantoate reductase from Pseudomonas aeruginosa in complex with NAD+ and ketopantoate
Descriptor: GLYCEROL, KETOPANTOATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Khanppnavar, B, Choudhury, A, Datta, S.
Deposit date:2019-05-12
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystallographic and biophysical analyses of Pseudomonas aeruginosa ketopantoate reductase: Implications of ligand induced conformational changes in cofactor recognition.
Biochimie, 2021
2K4N
DownloadVisualize
BU of 2k4n by Molmil
NMR structure of protein PF0246 from Pyrococcus furiosus: target PfR75 from the Northeast Structural Genomics Consortium
Descriptor: Protein PF0246
Authors:Cort, J.R, Ho, C.K, Shetty, K, Cunningham, K, Ma, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-13
Release date:2008-08-12
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution-State NMR Structure of protein PF0246 from Pyrococcus Furiosis
To be Published
4W8J
DownloadVisualize
BU of 4w8j by Molmil
Structure of the full-length insecticidal protein Cry1Ac reveals intriguing details of toxin packaging into in vivo formed crystals
Descriptor: CALCIUM ION, POTASSIUM ION, Pesticidal crystal protein cry1Ac
Authors:Evdokimov, A.G, Moshiri, F, Sturman, E.J, Rydel, T.J, Zheng, M, Seale, J.W, Franklin, S.
Deposit date:2014-08-25
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structure of the full-length insecticidal protein Cry1Ac reveals intriguing details of toxin packaging into in vivo formed crystals.
Protein Sci., 23, 2014
6JWQ
DownloadVisualize
BU of 6jwq by Molmil
Crystal structure of Plasmodium falciparum HPPK-DHPS wild type
Descriptor: 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-dihydropteroate synthase, ACETATE ION, ADENOSINE MONOPHOSPHATE, ...
Authors:Chitnumsub, P, Jaruwat, A, Yuthavong, Y.
Deposit date:2019-04-21
Release date:2020-02-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of Plasmodium falciparum hydroxymethyldihydropterin pyrophosphokinase-dihydropteroate synthase reveals the basis of sulfa resistance.
Febs J., 287, 2020
4W5W
DownloadVisualize
BU of 4w5w by Molmil
Rubisco activase from Arabidopsis thaliana
Descriptor: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, SULFATE ION
Authors:Hasse, D, Larsson, A.M, Andersson, I.
Deposit date:2014-08-19
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Arabidopsis thaliana Rubisco activase
Acta Crystallogr.,Sect.D, 71, 2015

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon