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PDB: 89346 件

4U3T
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Crystal structure of the transpeptidase domain of Neisseria gonorrhoeae penicillin-binding protein 2 derived from the penicillin-resistant strain 6140
分子名称: Penicillin-binding protein 2
著者Fedarovich, A, Davies, C.
登録日2014-07-22
公開日2014-12-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Effect of the Asp345a Insertion in Penicillin-Binding Protein 2 from Penicillin-Resistant Strains of Neisseria gonorrhoeae.
Biochemistry, 53, 2014
4FNK
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Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Ekiert, D.C, Wilson, I.A.
登録日2012-06-19
公開日2012-09-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Cross-neutralization of influenza A viruses mediated by a single antibody loop.
Nature, 489, 2012
5DH8
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Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction- G12A mutant in Zn2+
分子名称: 5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)-R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3', RNA (48-MER), ZINC ION
著者Mir, A, Chen, J, Neau, D, Golden, B.L.
登録日2015-08-29
公開日2015-10-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.297 Å)
主引用文献Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
Biochemistry, 54, 2015
7SQP
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Single chain trimer HLA-A*02:01 (Y108C) with HPV.16 E7 peptide YMLDLQPETTDL
分子名称: Protein E7 peptide,Beta-2-microglobulin,MHC class I antigen chimera, VHH
著者Finton, K.A.K, Rupert, P.B.
登録日2021-11-05
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Effects of HLA single chain trimer design on peptide presentation and stability.
Front Immunol, 14, 2023
6BOF
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Crystal structure of KRAS A146T-GDP demonstrating open switch 1 conformation
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
著者Bera, A.K, Yan, W, Westover, K.D.
登録日2017-11-20
公開日2019-05-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Tissue-Specific Oncogenic Activity of KRASA146T.
Cancer Discov, 9, 2019
4U5Y
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Crystal Structure of the complex between the GNAT domain of S. lividans PAT and the acetyl-CoA synthetase C-terminal domain of S. enterica
分子名称: Acetyl-coenzyme A synthetase, Acyl-CoA synthetase, SULFATE ION
著者Taylor, K.C, Tucker, A.C, Rank, K.C, Escalante-Semerena, J.C, Rayment, I.
登録日2014-07-25
公開日2014-11-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.926 Å)
主引用文献Insights into the specificity of lysine acetyltransferases.
J.Biol.Chem., 289, 2014
197D
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ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE
分子名称: DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3')
著者Langlois D'Estaintot, B, Dautant, A, Courseille, C, Precigoux, G.
登録日1994-11-24
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Orthorhombic crystal structure of the A-DNA octamer d(GTACGTAC). Comparison with the tetragonal structure.
Eur.J.Biochem., 213, 1993
6NTD
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Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 12 of CRAF Kinase protein
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
登録日2019-01-28
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
6C1K
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HypoPP mutant with ligand1
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GUANIDINE, Ion transport protein, ...
著者Catterall, W.A, Zheng, N, Jiang, D, Gamal El-Din, T.M.
登録日2018-01-04
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for gating pore current in periodic paralysis.
Nature, 557, 2018
6GOE
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KRAS full length G12V GPPNHP
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Cruz-Migoni, A, Quevedo, C.E, Carr, S.B, Ehebauer, M.T, Phillips, S.V.E, Rabbitts, T.H.
登録日2018-06-01
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based development of new RAS-effector inhibitors from a combination of active and inactive RAS-binding compounds.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6GH0
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Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure
分子名称: DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3')
著者Kotar, A, Rigo, R, Sissi, C, Plavec, J.
登録日2018-05-04
公開日2019-01-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure.
Nucleic Acids Res., 47, 2019
6OUX
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Structure of SMUL_1544, a decarboxylase from Sulfurospirillum multivorans
分子名称: Threonine phosphate decarboxylase-like enzyme
著者Wetterhorn, K.M, Rayment, I, Vecellio, A, Seeger, M, Keller, S, Schubert, T.
登録日2019-05-05
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural and functional analysis of an l-serine O-phosphate decarboxylase involved in norcobamide biosynthesis.
Febs Lett., 593, 2019
7SVU
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TnsBctd-TnsC-TniQ complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ...
著者Park, J, Tsai, A.W.T, Kellogg, E.H.
登録日2021-11-19
公開日2022-11-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures of the holo CRISPR RNA-guided transposon integration complex
Nature, 613, 2023
5MPB
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26S proteasome in presence of AMP-PNP (s3)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
登録日2016-12-16
公開日2017-03-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8TA3
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Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain Apo state with resolved N-terminal hairpin
分子名称: CHLORIDE ION, Chloride channel protein 2
著者Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
登録日2023-06-26
公開日2024-01-31
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024
5MSZ
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Lytic Polysaccharide Monooxygenase AA15 from Thermobia domestica in the Cu(I) State
分子名称: 1,2-ETHANEDIOL, COPPER (I) ION, Thermobia domestica domestica AA15
著者Hemsworth, G.R, Sabbadin, F, Ciano, L, Henrissat, B, Dupree, P, Tryfona, T, Besser, K, Elias, L, Pesante, G, Li, Y, Dowle, A, Bates, R, Gomez, L, Hallam, R, Davies, G.J, Walton, P.H, Bruce, N.C, McQueen-Mason, S.
登録日2017-01-06
公開日2018-02-28
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion.
Nat Commun, 9, 2018
5WAC
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ADC-7 in complex with boronic acid transition state inhibitor CR157
分子名称: Beta-lactamase, phosphonooxy-[[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]sulfonylamino]methyl]borinic acid
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.061 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
7SR4
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Single chain trimer HLA-A*02:01 (H98L, Y108C) with HPV.16 E7 peptide YMLDLQPETTDLYC
分子名称: Protein E7 peptide,Beta-2-microglobulin,MHC class I antigen chimera, VHH
著者Finton, K.A.K, Rupert, P.B.
登録日2021-11-07
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Effects of HLA single chain trimer design on peptide presentation and stability.
Front Immunol, 14, 2023
5WAG
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ADC-7 in complex with boronic acid transition state inhibitor S06017
分子名称: 1-{[hydroxy(phosphonooxy)boranyl]methyl}-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, SUCCINIC ACID
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.931 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
8P9O
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PCNA from Chaetomium thermophilum in complex with PolD3 peptide
分子名称: Proliferating cell nuclear antigen, Synthetic peptide corresponding to amino acids 437 to 451 of PolD3 from Chaetomium thermophilum
著者Alphey, M.S, Wolford, C.B, MacNeill, S.A.
登録日2023-06-06
公開日2023-12-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Canonical binding of Chaetomium thermophilum DNA polymerase delta / zeta subunit PolD3 and flap endonuclease Fen1 to PCNA.
Front Mol Biosci, 10, 2023
7SRK
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Single chain trimer HLA-A*24:02 (Y108C, A163C) with 8mer peptide YPPVPETF
分子名称: RPA-related protein RADX peptide,Beta-2-microglobulin,MHC class I antigen chimera, VHH
著者Finton, K.A.K, Rupert, P.B.
登録日2021-11-08
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Effects of HLA single chain trimer design on peptide presentation and stability.
Front Immunol, 14, 2023
6TIT
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VSV G_440
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者Albertini, A.A, Belot, L, Abouhamdan, A, Gaudin, Y.
登録日2019-11-22
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Identification of a pH-Sensitive Switch in VSV-G and a Crystal Structure of the G Pre-fusion State Highlight the VSV-G Structural Transition Pathway.
Cell Rep, 32, 2020
5KLC
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Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome
分子名称: Carbohydrate binding module E1
著者Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
登録日2016-06-24
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
6GQ3
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Human asparagine synthetase (ASNS) in complex with 6-diazo-5-oxo-L-norleucine (DON) at 1.85 A resolution
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-OXO-L-NORLEUCINE, ...
著者Zhu, W, Radadiya, A, Bisson, C, Jin, Y, Nordin, B.E, Imasaki, T, Wenzel, S, Sedelnikova, S.E, Berry, A.H, Nomanbhoy, T.K, Kozarich, J.W, Takagi, Y, Rice, D.W, Richards, N.G.J.
登録日2018-06-07
公開日2019-09-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献High-resolution crystal structure of human asparagine synthetase enables analysis of inhibitor binding and selectivity.
Commun Biol, 2, 2019
4ZNT
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Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in complex with a 3-Bromo-substituted OBHS derivative
分子名称: 3-bromophenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate, Estrogen receptor, Nuclear receptor-interacting peptide
著者Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
登録日2015-05-05
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016

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件を2024-10-09に公開中

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