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PDB: 88608 件

7ZM5
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Structure of Mossman virus receptor binding protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Attachment glycoprotein
著者Stelfox, A.J, Bowden, T.A, Rissanen, I, Harlos, K.
登録日2022-04-19
公開日2023-09-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structure and solution state of the C-terminal head region of the narmovirus receptor binding protein.
Mbio, 14, 2023
5K3Y
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Crystal structure of AuroraB/INCENP in complex with BI 811283
分子名称: Aurora kinase B-A, Inner centromere protein A, N-methyl-N-(1-methylpiperidin-4-yl)-4-{[4-({(1R,2S)-2-[(propan-2-yl)carbamoyl]cyclopentyl}amino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}benzamide
著者Bader, G, Zahn, S.K, Zoephel, A.
登録日2016-05-20
公開日2016-08-17
最終更新日2022-12-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Pharmacological Profile of BI 847325, an Orally Bioavailable, ATP-Competitive Inhibitor of MEK and Aurora Kinases.
Mol.Cancer Ther., 15, 2016
8A1E
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BU of 8a1e by Molmil
Rabies virus glycoprotein in complex with Fab fragments of 17C7 and 1112-1 neutralizing antibodies
分子名称: Fab 1112-1 heavy chain variable domain, Fab 1112-1 light chain variable domain, Fab 17C7 heavy chain variable domain, ...
著者Ng, W.M, Fedosyuk, S, English, S, Augusto, G, Berg, A, Thorley, L, Haselon, A.S, Segireddy, R.R, Bowden, T.A, Douglas, A.D.
登録日2022-06-01
公開日2022-08-17
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structure of trimeric pre-fusion rabies virus glycoprotein in complex with two protective antibodies.
Cell Host Microbe, 30, 2022
7ZRI
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BU of 7zri by Molmil
Cryo-EM structure of the KdpFABC complex in a nucleotide-free E1 conformation loaded with K+
分子名称: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
著者Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
登録日2022-05-04
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
6P0E
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Human DNA Ligase 1 (E346A,E592A) bound to adenylated DNA containing an 8-oxo guanine:adenine base-pair
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Schellenberg, M.J, Williams, R.S, Tumbale, P.S, Riccio, A.A.
登録日2019-05-16
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Two-tiered enforcement of high-fidelity DNA ligation.
Nat Commun, 10, 2019
2VJQ
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Formyl-CoA transferase mutant variant W48Q
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FORMYL-COENZYME A TRANSFERASE
著者Toyota, C.G, Berthold, C.L, Gruez, A, Jonsson, S, Lindqvist, Y, Cambillau, C, Richards, N.G.J.
登録日2007-12-11
公開日2008-01-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Differential Substrate Specificity and Kinetic Behavior of Escherichia Coli Yfdw and Oxalobacter Formigenes Formyl Coenzyme a Transferase.
J.Bacteriol., 190, 2008
1JH3
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Solution structure of tyrosyl-tRNA synthetase C-terminal domain.
分子名称: TYROSYL-TRNA SYNTHETASE
著者Guijarro, J.I, Pintar, A, Prochnicka-Chalufour, A, Guez, V, Gilquin, B, Bedouelle, H, Delepierre, M.
登録日2001-06-27
公開日2002-03-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of the Anticodon Arm Binding Domain of Bacillus stearothermophilus Tyrosyl-tRNA Synthetase
Structure, 10, 2002
5UM7
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Crystal structure of the reduced state of the thiol-disulfide reductase SdbA from Streptococcus gordonii
分子名称: ACETATE ION, Thioredoxin signature protein
著者Stogios, P.J, Evdokimova, E, Wawrzak, Z, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-01-26
公開日2017-02-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structure of the reduced state of the thiol-disulfide reductase SdbA from Streptococcus gordonii
To Be Published
7ZMW
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14-3-3s binding to non-natural peptide 2c
分子名称: 14-3-3 protein sigma, MAGNESIUM ION, non-natural peptide 1
著者Somsen, B.A, Craenmehr, F.W.B, Ottmann, C.
登録日2022-04-19
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional mapping of the 14-3-3 hub protein as a guide to design 14-3-3 molecular glues.
Chem Sci, 13, 2022
5K7A
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BU of 5k7a by Molmil
Crystal structure of laccase fron Thermus thermophilus HB27 (sodium nitrate 1.5 min)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-25
公開日2017-06-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Preserving metalic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
7B4O
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A Bacteroidetes bacterium CuZn-superoxide dismutase with ZnZn metalation
分子名称: Superoxide dismutase [Cu-Zn], ZINC ION
著者Wright, G.S.A.
登録日2020-12-02
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Bacterial Evolutionary Precursors of Eukaryotic Copper-Zinc Superoxide Dismutases.
Mol.Biol.Evol., 38, 2021
6CHK
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BU of 6chk by Molmil
Crystal structure of LacI family transcriptional regulator from Lactobacillus casei, Target EFI-512911, with bound TRIS
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, SODIUM ION, ...
著者Patskovsky, Y, Toro, R, Shabalin, I.G, Kowiel, M, Porebski, P.J, Minor, W, Jaskolski, M, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative, E.F.I.
登録日2018-02-22
公開日2018-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Automatic recognition of ligands in electron density by machine learning.
Bioinformatics, 35, 2019
2VG5
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BU of 2vg5 by Molmil
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
分子名称: O-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl] (4-chlorophenyl)thiocarbamate, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
著者Spallarossa, A, Cesarini, S, Ranise, A, Ponassi, M, Unge, T, Bolognesi, M.
登録日2007-11-08
公開日2007-12-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun., 365, 2008
7ZMU
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BU of 7zmu by Molmil
14-3-3s binding to non-natural peptide 2d
分子名称: 14-3-3 protein sigma, MAGNESIUM ION, non-natural peptide 2
著者Somsen, B.A, Craenmehr, F.W.B, Ottmann, C.
登録日2022-04-19
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Functional mapping of the 14-3-3 hub protein as a guide to design 14-3-3 molecular glues.
Chem Sci, 13, 2022
7B4P
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BU of 7b4p by Molmil
A Bacteroidetes bacterium CuZn-superoxide dismutase with CuZn metalation
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Wright, G.S.A.
登録日2020-12-02
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Bacterial Evolutionary Precursors of Eukaryotic Copper-Zinc Superoxide Dismutases.
Mol.Biol.Evol., 38, 2021
2VHD
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BU of 2vhd by Molmil
Crystal Structure Of The Di-Haem Cytochrome C Peroxidase From Pseudomonas aeruginosa - Mixed Valence Form
分子名称: CALCIUM ION, CYTOCHROME C551 PEROXIDASE, HEME C
著者Echalier, A, Brittain, T, Wright, J, Boycheva, S, Mortuza, G.B, Fulop, V, Watmough, N.J.
登録日2007-11-20
公開日2008-02-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Redox-Linked Structural Changes Associated with the Formation of a Catalytically Competent Form of the Diheme Cytochrome C Peroxidase from Pseudomonas Aeruginosa
Biochemistry, 47, 2008
2VIG
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BU of 2vig by Molmil
Crystal structure of human short-chain acyl CoA dehydrogenase
分子名称: 1,2-ETHANEDIOL, COENZYME A PERSULFIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Pike, A.C.W, Pantic, N, Parizotto, E, Gileadi, O, Ugochukwu, E, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A, Oppermann, U.
登録日2007-11-30
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Short-Chain Acyl Coa Dehydrogenase
To be Published
7ZQE
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Plastocyanin bound to PSI of Chlamydomonas reinhardtii
分子名称: COPPER (II) ION, Plastocyanin, chloroplastic
著者Naschberger, A, Amunts, A.
登録日2022-04-29
公開日2022-11-23
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
3WW8
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BU of 3ww8 by Molmil
Crystal structure of the computationally designed Pizza3 protein
分子名称: GLYCEROL, Pizza3 protein, SULFATE ION
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
1TGX
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X-RAY STRUCTURE AT 1.55 A OF TOXIN GAMMA, A CARDIOTOXIN FROM NAJA NIGRICOLLIS VENOM. CRYSTAL PACKING REVEALS A MODEL FOR INSERTION INTO MEMBRANES
分子名称: CHLORIDE ION, GAMMA-CARDIOTOXIN
著者Bilwes, A, Rees, B, Moras, D.
登録日1993-11-24
公開日1994-04-30
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献X-ray structure at 1.55 A of toxin gamma, a cardiotoxin from Naja nigricollis venom. Crystal packing reveals a model for insertion into membranes.
J.Mol.Biol., 239, 1994
5DCK
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BU of 5dck by Molmil
Crystal Structure of FIV Capsid C-Terminal Domain
分子名称: Capsid C-Terminal Domain
著者Galilee, M, Khwaja, A, Alian, A.
登録日2015-08-24
公開日2016-04-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure of FIV capsid C-terminal domain demonstrates lentiviral evasion of genetic fragility by coevolved substitutions.
Sci Rep, 6, 2016
4R6Q
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BU of 4r6q by Molmil
Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
分子名称: 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ...
著者Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M.
登録日2014-08-26
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity.
Acta Crystallogr.,Sect.D, 71, 2015
5KDU
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BU of 5kdu by Molmil
ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen
分子名称: 1,2-ETHANEDIOL, F5/8 type C domain protein, SERINE, ...
著者Noach, I, Ficko-Blean, E, Stuart, C, Boraston, A.B.
登録日2016-06-08
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4QUT
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Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) complexed with Histone H4-K(ac)12
分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, Histone H4, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-12
公開日2014-07-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells.
J Mol Cell Biol, 8, 2016
1JPF
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Crystal Structure Of The LCMV Peptidic Epitope Gp276 In Complex With The Murine Class I Mhc Molecule H-2Db
分子名称: BETA-2-MICROGLOBULIN, H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN, ...
著者Ciatto, C, Tissot, A.C, Tschopp, M, Capitani, G, Pecorari, F, Pluckthun, A, Grutter, M.G.
登録日2001-08-02
公開日2001-10-24
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Zooming in on the hydrophobic ridge of H-2D(b): implications for the conformational variability of bound peptides.
J.Mol.Biol., 312, 2001

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