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PDB: 88675 件

5IBZ
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Crystal structure of a novel cyclase (pfam04199).
分子名称: ACETYLPHOSPHATE, TRIETHYLENE GLYCOL, Uncharacterized protein
著者Nocek, B, Skarina, T, Brown, G, Joachimiak, A, Savchenko, A, Yakunin, A.
登録日2016-02-22
公開日2017-08-09
実験手法X-RAY DIFFRACTION (1.611 Å)
主引用文献Crystal structure of a novel cyclase (pfam04199).
To Be Published
6R8F
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BU of 6r8f by Molmil
Cryo-EM structure of the Human BRISC-SHMT2 complex
分子名称: BRISC and BRCA1-A complex member 2,BRCC45 (BRE, BRISC and BRCA1-A complex member 2), BRISC complex subunit Abraxas 2, ...
著者Walden, M, Hesketh, E, Tian, L, Ranson, N.A, Greenberg, R.A, Zeqiraj, E.
登録日2019-04-01
公開日2019-06-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Metabolic control of BRISC-SHMT2 assembly regulates immune signalling.
Nature, 570, 2019
6XMK
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1.70 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 7j
分子名称: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, TETRAETHYLENE GLYCOL
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
登録日2020-06-30
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
6EPY
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Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Periplasmic alpha-galactoside-binding protein, ...
著者Morera, S, Vigouroux, A.
登録日2017-10-12
公開日2018-04-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
7PF8
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SynFtn Variant E141A
分子名称: CHLORIDE ION, Ferritin, SODIUM ION
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
7JNH
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BU of 7jnh by Molmil
Crystal structure of a double-ENE RNA stability element in complex with a 28-mer poly(A) RNA
分子名称: 28-mer poly(A) RNA, COBALT HEXAMMINE(III), Core double ENE RNA (Xtal construct) from Oryza sativa transposon,Core double ENE RNA (Xtal construct) from Oryza sativa transposon, ...
著者Torabi, S.F, Vaidya, A.T, Tycowski, K.T, DeGregorio, S.J, Wang, J, Shu, M.D, Steitz, T.A, Steitz, J.A.
登録日2020-08-04
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献RNA stabilization by a poly(A) tail 3'-end binding pocket and other modes of poly(A)-RNA interaction.
Science, 371, 2021
6R8X
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COAGULATION FACTOR XI CATALYTIC DOMAIN IN COMPLEX WITH FAB-PORTION OF MAA868
分子名称: Coagulation factor XI, anti-Factor-XI Fab fragment heavy chain MAA868, anti-Factor-XI Fab fragment light chain MAA868
著者Schiering, N, Koch, A.
登録日2019-04-02
公開日2019-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献MAA868, a novel FXI antibody with a unique binding mode, shows durable effects on markers of anticoagulation in humans.
Blood, 133, 2019
7PFB
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2 minute Fe2+ soaked structure of SynFtn Variant D65A
分子名称: CHLORIDE ION, FE (III) ION, Ferritin
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
6XP3
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Structure of human PYCR1 complexed with cyclopentanecarboxylic acid
分子名称: Pyrroline-5-carboxylate reductase 1, mitochondrial, SULFATE ION, ...
著者Tanner, J.J, Bogner, A.N.
登録日2020-07-07
公開日2020-11-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献In crystallo screening for proline analog inhibitors of the proline cycle enzyme PYCR1.
J.Biol.Chem., 295, 2020
8BY2
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BU of 8by2 by Molmil
Structure of the K+/H+ exchanger KefC with GSH.
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ADENOSINE MONOPHOSPHATE, GLUTATHIONE, ...
著者Gulati, A, Drew, D.
登録日2022-12-11
公開日2023-12-27
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structure and mechanism of the K + /H + exchanger KefC.
Nat Commun, 15, 2024
7N89
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Room-temperature X-ray structure of SARS-CoV-2 main protease C145A mutant in complex with substrate Ac-SAVLQSGF-CONH2
分子名称: 3C-like proteinase, ACE-SER-ALA-VAL-LEU-GLN-SER-GLY-PHE-NH2
著者Kovalevsky, A, Kneller, D.W, Coates, L.
登録日2021-06-14
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Michaelis-like complex of SARS-CoV-2 main protease visualized by room-temperature X-ray crystallography.
Iucrj, 8, 2021
7PFI
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BU of 7pfi by Molmil
20 minute Fe2+ soaked structure of SynFtn Variant D65A
分子名称: CHLORIDE ION, FE (III) ION, Ferritin, ...
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
6R9J
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Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with A7 RNA
分子名称: A7 RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
著者Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
登録日2019-04-03
公開日2019-05-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.326 Å)
主引用文献The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
8ONH
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Variant Surface Glycoprotein VSG11wt-Oil
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein, alpha-D-glucopyranose, ...
著者Zeelen, J.P, Stebbins, C.E, Foti, K, Gkeka, A, Vlachou, E.P.
登録日2023-04-03
公開日2023-09-13
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
4XFR
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BU of 4xfr by Molmil
Crystal structure of a domain of unknown function (DUF1537) from Bordetella bronchiseptica (BB3215), Target EFI-511620, with bound citrate, domain swapped dimer, space group P6522
分子名称: CITRIC ACID, Uncharacterized protein
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-28
公開日2015-01-28
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars.
Proc.Natl.Acad.Sci.USA, 113, 2016
7PF7
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BU of 7pf7 by Molmil
Apo structure of SynFtn variant D65A
分子名称: CHLORIDE ION, Ferritin, SODIUM ION
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
6R9P
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Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AAUUAA RNA
分子名称: AAUUAA RNA, PAN2-PAN3 deadenylation complex catalytic subunit PAN2
著者Tang, T.T.L, Stowell, J.A.W, Hill, C.H, Passmore, L.A.
登録日2019-04-03
公開日2019-05-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.
Nat.Struct.Mol.Biol., 26, 2019
7PFK
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BU of 7pfk by Molmil
20 minute Fe2+ soaked structure of SynFtn variant E141D
分子名称: CHLORIDE ION, FE (III) ION, Ferritin
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
分子名称: Collar PA0615, Sheath PA0622
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
7PRP
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Crystal Structure of the B subunit of heat labile enterotoxin LT-IIc from Escherichia coli in apo form
分子名称: FORMIC ACID, Heat-labile enterotoxin IIA, B chain, ...
著者Varrot, A.
登録日2021-09-22
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization of the ganglioside recognition profile of Escherichia coli heat-labile enterotoxin LT-IIc.
Glycobiology, 32, 2022
5II1
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Crystal Structure of the fifth bromodomain of human polybromo (PB1) in complex with 1-methylisochromeno[3,4-c]pyrazol-5(3H)-one
分子名称: 1-methyl[2]benzopyrano[3,4-c]pyrazol-5(3H)-one, Protein polybromo-1
著者Filippakopoulos, P, Picaud, S, Felletar, I, Myrianthopoulos, V, Mikros, E, von Delft, F, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2016-03-01
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis.
J.Med.Chem., 59, 2016
7PFH
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2 minute Fe2+ soak structure of SynFtn E141D
分子名称: ACETATE ION, CHLORIDE ION, FE (III) ION, ...
著者Hemmings, A.M, Bradley, J.M.
登録日2021-08-11
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Key carboxylate residues for iron transit through the prokaryotic ferritin Syn Ftn.
Microbiology (Reading, Engl.), 167, 2021
6UHA
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Open-form Crystal Structure of Human RYR Receptor 3 ( 848-1055)
分子名称: DI(HYDROXYETHYL)ETHER, Ryanodine receptor 3
著者Wu, R, Kim, Y, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2019-09-27
公開日2020-08-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.855 Å)
主引用文献Open-form Crystal Structure of Human RYR Receptor 3 ( 848-1055)
To Be Published
4XIS
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A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: D-xylose, MANGANESE (II) ION, XYLOSE ISOMERASE, ...
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
8E06
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Symmetry expansion of dimeric LRRK1
分子名称: GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 1
著者Reimer, J.M, Lin, Y.X, Leschziner, A.E.
登録日2022-08-08
公開日2023-08-30
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of LRRK1 and mechanisms of autoinhibition and activation.
Nat.Struct.Mol.Biol., 30, 2023

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