Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 件

6Z5A
DownloadVisualize
BU of 6z5a by Molmil
Crystal structure of haspin (GSG2) in complex with macrocycle ODS2002941
分子名称: DIMETHYL SULFOXIDE, N-cyclopentyl-2-[(11,15-dimethyl-10-oxo-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-6-yl)oxy]acetamide, PHOSPHATE ION, ...
著者Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-05-26
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of haspin (GSG2) in complex with macrocycle ODS2002941
To Be Published
5NRM
DownloadVisualize
BU of 5nrm by Molmil
Crystal structure of the sixth cohesin from Acetivibrio cellulolyticus' scaffoldin B in complex with Cel5 dockerin S51I, L52N mutant
分子名称: CALCIUM ION, DocCel5: Type I dockerin repeat domain from A. cellulolyticus family 5 endoglucanase WP_010249057 S51I, L52N mutant, ...
著者Bule, P, Najmudin, S, Fontes, C.M.G.A, Alves, V.D.
登録日2017-04-24
公開日2018-01-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-function analyses generate novel specificities to assemble the components of multienzyme bacterial cellulosome complexes.
J. Biol. Chem., 293, 2018
6ZJV
DownloadVisualize
BU of 6zjv by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A
分子名称: Beta-galactosidase, MALONATE ION
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2020-06-29
公開日2020-08-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
7U60
DownloadVisualize
BU of 7u60 by Molmil
Integrin alaphIIBbeta3 complex with cRGDfV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARG-GLY-ASP-DPN-VAL, ...
著者Zhu, J, Lin, F.Y, Zhu, J, Springer, T.A.
登録日2022-03-03
公開日2022-08-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
8VEK
DownloadVisualize
BU of 8vek by Molmil
IsPETase - ACC mutant
分子名称: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
登録日2023-12-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
8VE9
DownloadVisualize
BU of 8ve9 by Molmil
IsPETase - ACCCETN mutant - CombiPETase
分子名称: CHLORIDE ION, GLYCEROL, Poly(ethylene terephthalate) hydrolase
著者Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
登録日2023-12-18
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
5N7O
DownloadVisualize
BU of 5n7o by Molmil
EthR2 in complex with SMARt-420 compound
分子名称: 4,4,4-trifluoro-1-(3-phenyl-1-oxa-2,8-diazaspiro[4.5]dec-2-en-8-yl)butan-1-one, Probable transcriptional regulatory protein
著者Wohlkonig, A, Wintjens, R.
登録日2017-02-21
公開日2017-04-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of the interaction between spiroisoxazoline SMARt-420 and the Mycobacterium tuberculosis repressor EthR2.
Biochem. Biophys. Res. Commun., 487, 2017
5KRP
DownloadVisualize
BU of 5krp by Molmil
Frutapin, a lectin from Artocarpus incisa: Cloning, Expressing and Structural Analysis.
分子名称: Frutapin, GLYCEROL
著者de Sousa, F.D, Coker, A.R, Guan, Y, Guo, J, de Oliveira Monteiro-Moreira, A.C, de Azevedo Moreira, R.
登録日2016-07-07
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Frutapin, a lectin fromArtocarpus incisa(breadfruit): cloning, expression and molecular insights.
Biosci. Rep., 37, 2017
6S5A
DownloadVisualize
BU of 6s5a by Molmil
CRYSTAL STRUCTURE OF FC P329G LALA WITH ANTI FC P329G FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc P329G LALA, ...
著者Ehler, A, Darowski, D, Jost, C, Stubenrauch, K, Wessels, U, Benz, J, Birk, M, Freimoser-Grundschober, A, Bruenker, P, Moessner, E, Umana, P, Kobold, S, Klein, C.
登録日2019-07-01
公開日2019-09-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献P329G-CAR-J: a novel Jurkat-NFAT-based CAR-T reporter system recognizing the P329G Fc mutation.
Protein Eng.Des.Sel., 32, 2019
8VEM
DownloadVisualize
BU of 8vem by Molmil
IsPETase - ACCE mutant
分子名称: Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
登録日2023-12-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.711 Å)
主引用文献Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
5KUN
DownloadVisualize
BU of 5kun by Molmil
Human cyclophilin A at 100K, Data set 2
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
登録日2016-07-13
公開日2016-08-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
6Z63
DownloadVisualize
BU of 6z63 by Molmil
FtsE structure from Streptococus pneumoniae in complex with ADP at 1.57 A resolution (spacegroup P 21)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division ATP-binding protein FtsE
著者Alcorlo, M, Straume, D, Havarstein, L.S, Hermoso, J.A.
登録日2020-05-27
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural Characterization of the Essential Cell Division Protein FtsE and Its Interaction with FtsX in Streptococcus pneumoniae.
Mbio, 11, 2020
5N4W
DownloadVisualize
BU of 5n4w by Molmil
Crystal structure of the Cul2-Rbx1-EloBC-VHL ubiquitin ligase complex
分子名称: Cullin-2, E3 ubiquitin-protein ligase RBX1, Elongin-B, ...
著者Cardote, T.A.F, Gadd, M.S, Ciulli, A.
登録日2017-02-11
公開日2017-06-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal Structure of the Cul2-Rbx1-EloBC-VHL Ubiquitin Ligase Complex.
Structure, 25, 2017
5KUW
DownloadVisualize
BU of 5kuw by Molmil
Human cyclophilin A at 100K, Data set 9
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
登録日2016-07-13
公開日2016-08-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
6ZD5
DownloadVisualize
BU of 6zd5 by Molmil
Crystal structure of YTHDC1 S378A mutant complex with m6A
分子名称: N-methyladenosine, SULFATE ION, YTH domain containing 1
著者Bedi, R.K, Li, Y, Caflisch, A.
登録日2020-06-13
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
5KV5
DownloadVisualize
BU of 5kv5 by Molmil
Human cyclophilin A at 278K, Data set 7
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
登録日2016-07-13
公開日2016-08-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
5ND3
DownloadVisualize
BU of 5nd3 by Molmil
Microtubule-bound MKLP2 motor domain in the with no nucleotide
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF20A, ...
著者Atherton, J, Yu, I.M, Cook, A, Muretta, J.M, Joseph, A.P, Major, J, Sourigues, Y, Clause, J, Topf, M, Rosenfeld, S.S, Houdusse, A, Moores, C.A.
登録日2017-03-07
公開日2017-10-04
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献The divergent mitotic kinesin MKLP2 exhibits atypical structure and mechanochemistry.
Elife, 6, 2017
8VK1
DownloadVisualize
BU of 8vk1 by Molmil
X-ray crystal structure of human IgE 4C8 Fab complex with Der p 2.0103
分子名称: Der p 2 variant 3, IgE 4C8 heavy chain, IgE 4C8 light chain
著者Khatri, K, Ball, A, Smith, S.A, Champan, M.D, Pomes, A, Chruszcz, M.
登録日2024-01-08
公開日2024-06-19
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2.
J.Allergy Clin.Immunol., 2024
6RNA
DownloadVisualize
BU of 6rna by Molmil
RIP2 Kinase Catalytic Domain complex with 2({4[(1,3benzothiazol5yl)amino]6(2methylpropane2sulfonyl)quinazolin7yl}oxy)ethan1ol
分子名称: 2-[4-(1,3-benzothiazol-5-ylamino)-6-~{tert}-butylsulfonyl-quinazolin-7-yl]oxyethanol, Receptor-interacting serine/threonine-protein kinase 2
著者Convery, M.A, Haile, P.A.
登録日2019-05-08
公開日2019-07-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Discovery of a First-in-Class Receptor Interacting Protein 2 (RIP2) Kinase Specific Clinical Candidate, 2-((4-(Benzo[d]thiazol-5-ylamino)-6-(tert-butylsulfonyl)quinazolin-7-yl)oxy)ethyl Dihydrogen Phosphate, for the Treatment of Inflammatory Diseases.
J.Med.Chem., 62, 2019
6X2J
DownloadVisualize
BU of 6x2j by Molmil
Structure of human TRPA1 in complex with agonist GNE551
分子名称: 5-amino-1-[(4-bromo-2-fluorophenyl)methyl]-N-(2,5-dimethoxyphenyl)-1H-1,2,3-triazole-4-carboxamide, Transient receptor potential cation channel subfamily A member 1
著者Rohou, A, Rouge, L, Chen, H.
登録日2020-05-20
公開日2020-11-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A Non-covalent Ligand Reveals Biased Agonism of the TRPA1 Ion Channel.
Neuron, 109, 2021
8VEL
DownloadVisualize
BU of 8vel by Molmil
IsPETase - ACCCC mutant
分子名称: Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
登録日2023-12-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.624 Å)
主引用文献Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
5KZH
DownloadVisualize
BU of 5kzh by Molmil
High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51
分子名称: ACETATE ION, Beta-lactamase, FORMIC ACID
著者June, C.M, Powers, R.A, Leonard, D.A.
登録日2016-07-25
公開日2016-08-17
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity.
Protein Sci., 25, 2016
5NAP
DownloadVisualize
BU of 5nap by Molmil
Torpedo californica acetylcholinesterase in complex with a non-chiral donepezil-like inhibitor 17
分子名称: (2~{E})-5,6-dimethoxy-2-[[1-(phenylmethyl)piperidin-4-yl]methylidene]-3~{H}-inden-1-one, Acetylcholinesterase, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Caliandro, R, Pesaresi, A, Lamba, D.
登録日2017-02-28
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Kinetic and structural studies on the interactions of Torpedo californica acetylcholinesterase with two donepezil-like rigid analogues.
J Enzyme Inhib Med Chem, 33, 2018
4YEK
DownloadVisualize
BU of 4yek by Molmil
X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with thymidine
分子名称: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
著者Balaev, V.V, Lashkov, A.A, Gabdulkhakov, A.G, Betzel, C, Mikhailov, A.M.
登録日2015-02-24
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural investigation of the thymidine phosphorylase from Salmonella typhimurium in the unliganded state and its complexes with thymidine and uridine.
Acta Crystallogr.,Sect.F, 72, 2016
5NGJ
DownloadVisualize
BU of 5ngj by Molmil
Crystal structure of pb6, major tail tube protein of bacteriophage T5
分子名称: CHLORIDE ION, Tail tube protein
著者Arnaud, C.-A, Effantin, G, Vives, C, Engilberge, S, Bacia, M, Boulanger, P, Girard, E, Schoehn, G, Breyton, C.
登録日2017-03-17
公開日2018-01-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bacteriophage T5 tail tube structure suggests a trigger mechanism for Siphoviridae DNA ejection.
Nat Commun, 8, 2017

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon