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PDB: 89346 件

7MWR
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Structure of De Novo designed beta sheet heterodimer LHD101A53/B4
分子名称: LHD101A54, LHD101B4, MALONATE ION
著者Bera, A.K, Sahtoe, D.D, Kang, A, Praetorius, F, Baker, D.
登録日2021-05-17
公開日2022-01-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Reconfigurable asymmetric protein assemblies through implicit negative design.
Science, 375, 2022
8SF5
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Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in open conformation
分子名称: O-acetylhomoserine/O-acetylserine sulfhydrylase
著者Buller, A.R, Zmich, A.P, Bingman, C.A.
登録日2023-04-10
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family.
Acs Catalysis, 13, 2023
8C7W
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Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2304
分子名称: 1,2-ETHANEDIOL, 6-methyl-9-piperazin-1-yl-4-(3,4,5-trimethoxyphenyl)-5,7-dihydropyrido[4,3-d][2]benzazepine, Activin receptor type I, ...
著者Cros, J, Williams, E.P, Sweeney, M.N, Smil, D, Gonzalez-Alvarez, H, Al-awar, R, Bullock, A.N.
登録日2023-01-17
公開日2023-02-08
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Discovery of Conformationally Constrained ALK2 Inhibitors.
J.Med.Chem., 67, 2024
6VZG
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Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
著者Leschziner, A.E, Baker, R.W.
登録日2020-02-28
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
5NKP
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BU of 5nkp by Molmil
Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
分子名称: CHLORIDE ION, CITRIC ACID, Kelch-like protein 3, ...
著者Chen, Z, Sorrell, F.J, Pinkas, D.M, Williams, E, Mathea, S, Goubin, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Burgess-Brown, N, Bountra, C, Bullock, A.
登録日2017-03-31
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
To Be Published
6TK6
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BU of 6tk6 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: Dark structure in neutral conditions with attached light datasets at 800fs, 2ps, 100ps, 1ns, 16ns, 1us, 30us, 150us, 1ms and 20ms
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
7N5F
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Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Down' conformation in GDN
分子名称: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
著者Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
登録日2021-06-05
公開日2022-02-16
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
6TK4
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Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ns+16ns structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
7B0B
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Fab HbnC3t1p1_C6 bound to SARS-CoV-2 RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, IGK@ protein, ...
著者Borenstein-Katz, A, Diskin, R.
登録日2020-11-19
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Somatic hypermutation introduces bystander mutations that prepare SARS-CoV-2 antibodies for emerging variants.
Immunity, 56, 2023
7N5D
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BU of 7n5d by Molmil
Composite Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
分子名称: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
著者Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
登録日2021-06-05
公開日2022-02-16
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
7N5G
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Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Up' conformation in GDN
分子名称: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
著者Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
登録日2021-06-05
公開日2022-02-16
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
6W0F
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Closed-gate KcsA soaked in 0mM KCl/5mM BaCl2
分子名称: Fab Heavy Chain, Fab Light Chain, POTASSIUM ION, ...
著者Rohaim, A, Gong, L, Li, J.
登録日2020-02-29
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
7T7G
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BU of 7t7g by Molmil
Imipenem-OXA-23 2 minute complex
分子名称: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Beta-lactamase OXA-23
著者Smith, C.A, Stewart, N.K, Vakulenko, S.B.
登録日2021-12-15
公開日2022-05-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献C6 Hydroxymethyl-Substituted Carbapenem MA-1-206 Inhibits the Major Acinetobacter baumannii Carbapenemase OXA-23 by Impeding Deacylation.
Mbio, 13, 2022
8C4I
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BU of 8c4i by Molmil
Ligand-free Crystal Structure of the decameric Sulfofructose Transaldolase BmSF-TAL
分子名称: BmSF-TAL
著者Snow, A.J.D, Sharma, M, Davies, G.J.
登録日2023-01-04
公開日2023-02-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
Structure, 31, 2023
7N5E
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BU of 7n5e by Molmil
Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
分子名称: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
著者Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
登録日2021-06-05
公開日2022-02-16
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
8RJC
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BU of 8rjc by Molmil
Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec61-TRAP, open conformation 1
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Lewis, A.J.O, Hegde, R.S.
登録日2023-12-20
公開日2024-01-24
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (2.90061 Å)
主引用文献Structural analysis of the dynamic ribosome-translocon complex.
Elife, 13, 2024
8OJN
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BU of 8ojn by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
分子名称: Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-24
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OML
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BU of 8oml by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd1334 C-terminal domains
分子名称: Cell wall surface anchor family protein, PHOSPHATE ION
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-31
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
7ZNF
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BU of 7znf by Molmil
ALTERNATING ZINC FINGERS IN THE HUMAN MALE ASSOCIATED PROTEIN ZFY: 2D NMR STRUCTURE OF AN EVEN FINGER AND IMPLICATIONS FOR "JUMPING-LINKER" DNA RECOGNITION
分子名称: ZINC FINGER, ZINC ION
著者Kochoyan, M, Keutmann, H.T, Weiss, M.A.
登録日1991-08-22
公開日1994-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Alternating zinc fingers in the human male associated protein ZFY: 2D NMR structure of an even finger and implications for "jumping-linker" DNA recognition.
Biochemistry, 30, 1991
3MJB
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BU of 3mjb by Molmil
Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to sulfate
分子名称: Domain 3 of the cricket paralysis virus intergenic region IRES RNA, RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3'), SULFATE ION
著者Kieft, J.S, Golden, B.L, Costantino, D.A, Chase, E.
登録日2010-04-12
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification and characterization of anion binding sites in RNA.
Rna, 16, 2010
8ONF
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Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
分子名称: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-04-02
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8ONC
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BU of 8onc by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
分子名称: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-04-01
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8BZ3
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BU of 8bz3 by Molmil
Structure od the carbohydrate reconition domain of Gal3 in comples with SAF-2-010
分子名称: Galectin-3, [(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate
著者Medrano, F.J, Romero, A.
登録日2022-12-14
公開日2023-03-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Selectively Modified Lactose and N -Acetyllactosamine Analogs at Three Key Positions to Afford Effective Galectin-3 Ligands.
Int J Mol Sci, 24, 2023
5NFE
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Neutron structure of human transthyretin (TTR) T119M mutant at room temperature to 1.85A resolution
分子名称: Transthyretin
著者Yee, A.W, Moulin, M, Blakeley, M.P, Ostermann, A, Cooper, J.B, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
登録日2017-03-14
公開日2019-01-02
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.853 Å), X-RAY DIFFRACTION
主引用文献A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
6MR9
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E. coli DHFR complex with a reaction intermediate
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, CHLORIDE ION, Dihydrofolate reductase, ...
著者Cao, H, Rodrigues, J, Benach, J, Frommelt, A, Morisco, L, Koss, J, Shakhnovich, E, Skolnick, J.
登録日2018-10-12
公開日2019-05-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Time-resolved x-ray crystallography capture of a slow reaction tetrahydrofolate intermediate.
Struct Dyn., 6, 2019

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件を2024-10-09に公開中

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