Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 件

7B5U
DownloadVisualize
BU of 7b5u by Molmil
RCK_C domain dimer of S.agalactiae BusR in complex with c-di-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, GntR family transcriptional regulator
著者Bandera, A.M, Witte, G.
登録日2020-12-07
公開日2021-08-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture.
Nucleic Acids Res., 49, 2021
1JSL
DownloadVisualize
BU of 1jsl by Molmil
Crystal structure of Erwinia chrysanthemi L-asparaginase complexed with 6-HYDROXY-D-NORLEUCINE
分子名称: 6-HYDROXY-D-NORLEUCINE, GLYCEROL, L-asparaginase, ...
著者Aghaiypour, K, Wlodawer, A, Lubkowski, J.
登録日2001-08-17
公開日2002-01-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Do bacterial L-asparaginases utilize a catalytic triad Thr-Tyr-Glu?
Biochim.Biophys.Acta, 1550, 2001
1JTF
DownloadVisualize
BU of 1jtf by Molmil
Crystal Structure Analysis of VP39-F180W mutant and m7GpppG complex
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, VP39
著者Hu, G, Oguro, A, Gershon, P.D, Quiocho, F.A.
登録日2001-08-20
公開日2002-07-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The "cap-binding slot" of an mRNA cap-binding protein: quantitative effects of aromatic side chain choice in the double-stacking sandwich with cap.
Biochemistry, 41, 2002
4IFR
DownloadVisualize
BU of 4ifr by Molmil
2.40 Angstroms X-ray crystal structure of R239A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase from Pseudomonas fluorescens
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, ZINC ION
著者Huo, L, Davis, I, Chen, L, Liu, A.
登録日2012-12-14
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.391 Å)
主引用文献The power of two: arginine 51 and arginine 239* from a neighboring subunit are essential for catalysis in alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase.
J.Biol.Chem., 288, 2013
2VOT
DownloadVisualize
BU of 2vot by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
分子名称: (5R,6R,7S,8R)-6,7,8-trihydroxy-5-(hydroxymethyl)-2-[(phenylamino)methyl]-5,6,7,8-tetrahydro-1H-imidazo[1,2-a]pyridin-4-ium, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
著者Tailford, L.N, Offen, W.A, Smith, N, Dumon, C, Moreland, C, Gratien, J, Heck, M.-P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
登録日2008-02-20
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
1JUM
DownloadVisualize
BU of 1jum by Molmil
Crystal structure of the multidrug binding transcriptional repressor QacR bound to the natural drug berberine
分子名称: BERBERINE, HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION, SULFATE ION
著者Schumacher, M.A, Miller, M.C, Grkovic, S, Brown, M.H, Skurray, R.A, Brennan, R.G.
登録日2001-08-24
公開日2001-12-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural mechanisms of QacR induction and multidrug recognition.
Science, 294, 2001
5DID
DownloadVisualize
BU of 5did by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a difluoro-substituted A-CD ring estrogen derivative (1S,3aR,5S,7aS)-5-(2,3-difluoro-4-hydroxyphenyl)-7a-methyloctahydro-1H-inden-1-ol
分子名称: (1S,3aR,5S,7aS)-5-(2,3-difluoro-4-hydroxyphenyl)-7a-methyloctahydro-1H-inden-1-ol, Estrogen receptor, Nuclear receptor coactivator 2
著者Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
登録日2015-08-31
公開日2016-05-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
1JOA
DownloadVisualize
BU of 1joa by Molmil
NADH PEROXIDASE WITH CYSTEINE-SULFENIC ACID
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH PEROXIDASE
著者Yeh, J.I, Claiborne, A.C, Hol, W.G.J.
登録日1996-07-02
公開日1997-01-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the native cysteine-sulfenic acid redox center of enterococcal NADH peroxidase refined at 2.8 A resolution.
Biochemistry, 35, 1996
9CMH
DownloadVisualize
BU of 9cmh by Molmil
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin
分子名称: Claudin-4, Heat-labile enterotoxin B chain
著者Vecchio, A.J.
登録日2024-07-15
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM Structures of Clostridium perfringens Enterotoxin Bound to its Human Receptor, Claudin-4
To Be Published
9EUP
DownloadVisualize
BU of 9eup by Molmil
Inhibitor-free outward-open structure of Drosophila dopamine transporter
分子名称: 9D5 ANTIBODY, HEAVY CHAIN, LIGHT CHAIN, ...
著者Pedersen, C.N, Yang, F, Ita, S, Xu, Y, Akunuri, R, Trampari, S, Neumann, C.M.T, Desdorf, L.M, Schioett, B, Salvino, J.M, Mortensen, O.V, Nissen, P, Shahsavar, A.
登録日2024-03-27
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site.
J.Neurochem., 2024
6PS0
DownloadVisualize
BU of 6ps0 by Molmil
XFEL beta2 AR structure by ligand exchange from Alprenolol to Carazolol.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, CHOLESTEROL, ...
著者Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
登録日2019-07-12
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
3ZKS
DownloadVisualize
BU of 3zks by Molmil
BACE2 XAPERONE COMPLEX WITH INHIBITOR
分子名称: 5-(2,2,2-Trifluoro-ethoxy)-pyridine-2-carboxylic acid [3-((S)-2-amino-1,4-dimethyl-6-oxo-1,4,5,6-tetrahydro-pyrimidin-4-yl)-phenyl]-amide, BETA-SECRETASE 2, XA4813
著者Banner, D.W, Kuglstatter, A, Benz, J, Stihle, M, Ruf, A.
登録日2013-01-24
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones
Acta Crystallogr.,Sect.D, 69, 2013
8PR7
DownloadVisualize
BU of 8pr7 by Molmil
Aurora-A in complex with CEP192 and an inhibitory monobody
分子名称: ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, Centrosomal protein of 192 kDa, ...
著者Miles, J.A, Bayliss, R.
登録日2023-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Aurora-A in complex with CEP192 and an inhibitory monobody
To Be Published
3X3X
DownloadVisualize
BU of 3x3x by Molmil
Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine
分子名称: 2-PHENYL-ETHANOL, COPPER (II) ION, GLYCEROL, ...
著者Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
登録日2015-03-10
公開日2015-08-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
2VVW
DownloadVisualize
BU of 2vvw by Molmil
Structure of Vaccinia virus protein A52
分子名称: PROTEIN A52
著者Graham, S.C, Bahar, M.W, Cooray, S, Chen, R.A.-J, Whalen, D.M, Abrescia, N.G.A, Alderton, D, Owens, R.J, Stuart, D.I, Smith, G.L, Grimes, J.M.
登録日2008-06-12
公開日2008-08-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Vaccinia Virus Proteins A52 and B14 Share a Bcl-2-Like Fold But Have Evolved to Inhibit NF-kappaB Rather Than Apoptosis
Plos Pathog., 4, 2008
1JXM
DownloadVisualize
BU of 1jxm by Molmil
CRYSTAL STRUCTURE OF THE GMP BOUND SH3-HOOK-GK FRAGMENT OF PSD-95
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANIDINE, GUANOSINE-5'-MONOPHOSPHATE, ...
著者Tavares, G.A, Panepucci, E.H, Brunger, A.T.
登録日2001-09-07
公開日2002-01-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural characterization of the intramolecular interaction between the SH3 and guanylate kinase domains of PSD-95.
Mol.Cell, 8, 2001
2VZW
DownloadVisualize
BU of 2vzw by Molmil
X-ray structure of the heme-bound GAF domain of sensory histidine kinase DosT of Mycobacterium tuberculosis
分子名称: ACETATE ION, OXYGEN MOLECULE, PROBABLE HISTIDINE KINASE RESPONSE REGULATOR, ...
著者Podust, L.M, Ioanoviciu, A, Ortiz de Montellano, P.R.
登録日2008-08-06
公開日2009-03-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献2.3 A X-Ray Structure of the Heme-Bound Gaf Domain of Sensory Histidine Kinase Dost of Mycobacterium Tuberculosis.
Biochemistry, 47, 2008
1K0N
DownloadVisualize
BU of 1k0n by Molmil
Chloride Intracellular Channel 1 (CLIC1) complexed with glutathione
分子名称: CHLORIDE INTRACELLULAR CHANNEL PROTEIN 1, GLUTATHIONE
著者Harrop, S.J, DeMaere, M.Z, Fairlie, W.D, Reztsova, T, Valenzuela, S.M, Mazzanti, M, Tonini, R, Qiu, M.R, Jankova, L, Warton, K, Bauskin, A.R, Wu, W.M, Pankhurst, S, Campbell, T.J, Breit, S.N, Curmi, P.M.G.
登録日2001-09-19
公開日2001-12-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a soluble form of the intracellular chloride ion channel CLIC1 (NCC27) at 1.4-A resolution.
J.Biol.Chem., 276, 2001
1K2H
DownloadVisualize
BU of 1k2h by Molmil
Three-dimensional Solution Structure of apo-S100A1.
分子名称: S-100 protein, alpha chain
著者Rustandi, R.R, Baldisseri, D.M, Inman, K.G, Nizner, P, Hamilton, S.M, Landar, A, Landar, A, Zimmer, D.B, Weber, D.J.
登録日2001-09-27
公開日2002-02-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the calcium-signaling protein apo-S100A1 as determined by NMR.
Biochemistry, 41, 2002
8QB9
DownloadVisualize
BU of 8qb9 by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
分子名称: Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献CryoEM architecture of a native stretch-sensitive membrane microdomain
To Be Published
6PD5
DownloadVisualize
BU of 6pd5 by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 6.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
著者Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
登録日2019-06-18
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
2VRH
DownloadVisualize
BU of 2vrh by Molmil
Structure of the E. coli trigger factor bound to a translating ribosome
分子名称: 50S RIBOSOMAL PROTEIN L23, 50S RIBOSOMAL PROTEIN L24, 50S RIBOSOMAL PROTEIN L29, ...
著者Merz, F, Boehringer, D, Schaffitzel, C, Preissler, S, Hoffmann, A, Maier, T, Rutkowska, A, Lozza, J, Ban, N, Bukau, B, Deuerling, E.
登録日2008-04-07
公開日2008-06-17
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (19 Å)
主引用文献Molecular Mechanism and Structure of Trigger Factor Bound to the Translating Ribosome.
Embo J., 27, 2008
8QBB
DownloadVisualize
BU of 8qbb by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献CryoEM architecture of a native stretch-sensitive membrane microdomain
To Be Published
2WB2
DownloadVisualize
BU of 2wb2 by Molmil
Drosophila Melanogaster (6-4) Photolyase Bound To double stranded Dna containing a T(6-4)C Photolesion
分子名称: 5'-D(*AP*CP*AP*GP*CP*GP*GP*64PP*ZP*GP*CP*AP *GP*GP*T)-3', 5'-D(*TP*AP*CP*CP*TP*GP*CP*GP*AP*CP*CP*GP*CP*TP*G)-3', FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Glas, A.F, Schneider, S, Maul, M.J, Hennecke, U, Carell, T.
登録日2009-02-20
公開日2009-03-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal Structure of the T(6-4)C Lesion in Complex with a (6-4) DNA Photolyase and Repair of Uv- Induced (6-4) and Dewar Photolesions.
Chemistry, 15, 2009
6W9K
DownloadVisualize
BU of 6w9k by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with Prednisolone and PGC1a coregulator fragment
分子名称: GLYCEROL, Glucocorticoid Receptor, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, ...
著者Liu, X, Ortlund, E.A.
登録日2020-03-23
公開日2020-11-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Disruption of a key ligand-H-bond network drives dissociative properties in vamorolone for Duchenne muscular dystrophy treatment.
Proc.Natl.Acad.Sci.USA, 117, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon