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PDB: 88675 件

7SSN
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Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2021-11-11
公開日2022-02-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
Nat Commun, 12, 2021
7SS9
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Late translocation intermediate with EF-G partially dissociated (Structure V)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Loveland, A.B, Gamper, H.B, Hou, Y, Korostelev, A.A.
登録日2021-11-10
公開日2022-02-23
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
Nat Commun, 12, 2021
6W11
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The structure of Sulfolobus solfataricus Csa3 in complex with cyclic tetraadenylate (cA4)
分子名称: CRISPR locus-related putative DNA-binding protein Csa3, cA4
著者Charbonneau, A.A, Gauvin, C.C, Lawrence, C.M.
登録日2020-03-03
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Cyclic Tetra-Adenylate (cA 4 ) Recognition by Csa3; Implications for an Integrated Class 1 CRISPR-Cas Immune Response in Saccharolobus solfataricus.
Biomolecules, 11, 2021
7TOR
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Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A.
登録日2022-01-24
公開日2022-05-25
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM.
Nat Commun, 13, 2022
6RV3
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Crystal structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1) in a closed conformation with a bound inhibitor BAY 1000493
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Rodstrom, K.E.J, Pike, A.C.W, Zhang, W, Quigley, A, Speedman, D, Mukhopadhyay, S.M.M, Shrestha, L, Chalk, R, Venkaya, S, Bushell, S.R, Tessitore, A, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
登録日2019-05-30
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A lower X-gate in TASK channels traps inhibitors within the vestibule.
Nature, 582, 2020
6NST
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Crystal structure of branched chain amino acid aminotransferase from Pseudomonas aeruginosa
分子名称: Branched-chain-amino-acid aminotransferase, SULFATE ION
著者Chang, C, Skarina, T, Savshenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-01-25
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.136 Å)
主引用文献Crystal structure of branched chain amino acid aminotransferase from Pseudomonas aeruginosa
To Be Published
7TOQ
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Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A.
登録日2022-01-24
公開日2022-05-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM.
Nat Commun, 13, 2022
7TOS
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E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A.
登録日2022-01-24
公開日2022-05-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM.
Nat Commun, 13, 2022
8D1Q
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Crystal structure of Plasmodium falciparum GRP78-NBD in complex with 8-Aminoadenosine
分子名称: (2R,3R,4S,5R)-2-(6,8-diaminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol, Chaperone DnaK, SULFATE ION
著者Mrozek, A, Chen, Y, Antoshchenko, T, Park, H.W.
登録日2022-05-27
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A non-traditional crystal-based compound screening method targeting the ATP binding site of Plasmodium falciparum GRP78 for identification of novel nucleoside analogues.
Front Mol Biosci, 9, 2022
6RZ9
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Crystal structure of the human cysteinyl leukotriene receptor 2 in complex with ONO-2770372
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-8-[[4-[4-(5-fluoranyl-2-methyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3-dih ydro-1,4-benzoxazine-2-carboxylic acid, CHOLESTEROL, ...
著者Gusach, A, Luginina, A, Marin, E, Brouillette, R.L, Besserer-Offroy, E, Longpre, J.M, Ishchenko, A, Popov, P, Fujimoto, T, Maruyama, T, Stauch, B, Ergasheva, M, Romanovskaya, D, Stepko, A, Kovalev, K, Shevtsov, M, Gordeliy, V, Han, G.W, Sarret, P, Katritch, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
登録日2019-06-12
公開日2019-12-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.
Nat Commun, 10, 2019
8D22
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Crystal structure of Plasmodium falciparum GRP78-NBD in complex with Piclidenoson
分子名称: Chaperone DnaK, Piclidenoson, SULFATE ION
著者Mrozek, A, Park, H.W.
登録日2022-05-27
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A non-traditional crystal-based compound screening method targeting the ATP binding site of Plasmodium falciparum GRP78 for identification of novel nucleoside analogues.
Front Mol Biosci, 9, 2022
7QLR
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Receptor-binding protein of Clostridium difficile phage CDHS-1
分子名称: CDHS1_22 Putative tail fiber protein, MAGNESIUM ION
著者Wallis, R, Dowah, A, Clokie, M.R.J.
登録日2021-12-20
公開日2022-12-28
実験手法X-RAY DIFFRACTION (2.462 Å)
主引用文献The structurome of a Clostridium difficile phage and the remarkable accurate prediction of its novel phage receptor-binding protein
To Be Published
8T8B
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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MAI-tripeptidyl-tRNA analog ACCA-IAMf at 2.65A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Thaler, J, Syroegin, E.A, Breuker, K, Polikanov, Y.S, Micura, R.
登録日2023-06-22
公開日2023-07-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Practical Synthesis of N -Formylmethionylated Peptidyl-tRNA Mimics.
Acs Chem.Biol., 18, 2023
8SU1
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F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and pamidronate
分子名称: Epi-isozizaene synthase, MAGNESIUM ION, PAMIDRONATE, ...
著者Eaton, S.A, Christianson, D.W.
登録日2023-05-11
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products.
Biochemistry, 62, 2023
8SU3
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F95S epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Eaton, S.A, Christianson, D.W.
登録日2023-05-11
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products.
Biochemistry, 62, 2023
6PT3
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Crystal structure of the active delta opioid receptor in complex with the small molecule agonist DPI-287
分子名称: 4-[(R)-[(2S,5R)-4-benzyl-2,5-dimethylpiperazin-1-yl](3-hydroxyphenyl)methyl]-N,N-diethylbenzamide, Delta opioid receptor
著者Claff, T, Yu, J, Blais, V, Patel, N, Martin, C, Wu, L, Han, G.W, Holleran, B.J, Van der Poorten, O, Hanson, M.A, Sarret, P, Gendron, L, Cherezov, V, Katritch, V, Ballet, S, Liu, Z, Muller, C.E, Stevens, R.C.
登録日2019-07-14
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Elucidating the active delta-opioid receptor crystal structure with peptide and small-molecule agonists.
Sci Adv, 5, 2019
8SU2
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F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and risedronate
分子名称: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Epi-isozizaene synthase, GLYCEROL, ...
著者Eaton, S.A, Christianson, D.W.
登録日2023-05-11
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products.
Biochemistry, 62, 2023
6PTF
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Crystal Structure of CobT from Methanocaldococcus jannaschii in Apo State
分子名称: UPF0284 protein MJ1598
著者Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante-Semerena, J.C, Rayment, I.
登録日2019-07-15
公開日2020-07-22
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria.
Sci Rep, 12, 2022
8T8C
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BU of 8t8c by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Thaler, J, Syroegin, E.A, Breuker, K, Polikanov, Y.S, Micura, R.
登録日2023-06-22
公開日2023-07-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Practical Synthesis of N -Formylmethionylated Peptidyl-tRNA Mimics.
Acs Chem.Biol., 18, 2023
6NXY
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Crystal structure of Arabidopsis thaliana cytosolic triosephosphate isomerase C218D mutant
分子名称: SODIUM ION, Triosephosphate isomerase, cytosolic
著者Jimenez-Sandoval, P, Diaz-Quezada, C, Torres-Larios, A, Brieba, L.G.
登録日2019-02-10
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural basis for the modulation of plant cytosolic triosephosphate isomerase activity by mimicry of redox-based modifications.
Plant J., 99, 2019
7U1V
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Structure of SPAC806.04c protein from fission yeast covalently bound to BeF3
分子名称: Damage-control phosphatase SPAC806.04c, NICKEL (II) ION, PHOSPHATE ION, ...
著者Jacewicz, A, Sanchez, A.M, Shuman, S.
登録日2022-02-22
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate.
J.Biol.Chem., 298, 2022
8SU5
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F198T epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Eaton, S.A, Christianson, D.W.
登録日2023-05-11
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products.
Biochemistry, 62, 2023
7U1X
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Structure of SPAC806.04c protein from fission yeast covalently bound to BeF3
分子名称: Damage-control phosphatase SPAC806.04c, PHOSPHATE ION, ZINC ION
著者Jacewicz, A, Sanchez, A.M, Shuman, S.
登録日2022-02-22
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate.
J.Biol.Chem., 298, 2022
6VM9
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T4H2 T cell receptor bound to HLA-A2 presenting gp100T2M peptide (IMDQVPFSV)
分子名称: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
著者Smith, A.R, Baker, B.M.
登録日2020-01-27
公開日2021-01-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structurally silent peptide anchor modifications allosterically modulate T cell recognition in a receptor-dependent manner
Proc.Natl.Acad.Sci.USA, 118, 2021
6VXZ
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SthK P300A cyclic nucleotide-gated potassium channel in the closed state, in complex with cAMP
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SthK
著者Schmidpeter, P.A.M, Rheinberger, J, Nimigean, C.M.
登録日2020-02-25
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Prolyl isomerization controls activation kinetics of a cyclic nucleotide-gated ion channel.
Nat Commun, 11, 2020

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件を2024-07-31に公開中

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