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PDB: 88675 件

8EH5
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Cryo-EM structure of L9 Fab in complex with rsCSP
分子名称: Circumsporozoite protein, L9 Heavy chain, L9 Light chain
著者Martin, G.M, Ward, A.B.
登録日2022-09-13
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural basis of epitope selectivity and potent protection from malaria by PfCSP antibody L9.
Nat Commun, 14, 2023
8CRT
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Local refinement of Rh trimer, glycophorin B and Band3-III transmembrane region, class 1a of erythrocyte ankyrin-1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ammonium transporter Rh type A, Band 3 anion transport protein, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-11
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
7PXD
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Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state B)
分子名称: AAA ATPase forming ring-shaped complexes, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Jomaa, A, Kavalchuk, M, Weber-Ban, E.
登録日2021-10-08
公開日2022-01-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13, 2022
6FAI
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Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit
分子名称: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Scaiola, A, Pena, C, Weisser, M, Boehringer, D, Leibundgut, M, Klingauf-Nerurkar, P, Gerhardy, S, Panse, V.G, Ban, N.
登録日2017-12-15
公開日2018-02-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit.
EMBO J., 37, 2018
7PFS
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Crystal structure of ERAP2 aminopeptidase in complex with phosphinic pseudotripeptide ((1R)-1-Amino-3-phenylpropyl){2-([1,1:3,1-terphenyl]-5-ylmethyl)-3-[((2S)-1-amino-1-oxo-3-phenylpropan-2-yl)-amino]-3-oxopropyl}phosphinic acid
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Giastas, P, Stratikos, E, Mpakali, A.
登録日2021-08-12
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Inhibitor-Dependent Usage of the S1' Specificity Pocket of ER Aminopeptidase 2.
Acs Med.Chem.Lett., 13, 2022
6OLA
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Structure of the PCV2d virus-like particle
分子名称: Capsid protein, DNA (5'-D(P*CP*CP*GP*G)-3')
著者Khayat, R, Wen, K, Alimova, A, Galarza, J, Gottlieb, P.
登録日2019-04-16
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural characterization of the PCV2d virus-like particle at 3.3 angstrom resolution reveals differences to PCV2a and PCV2b capsids, a tetranucleotide, and an N-terminus near the icosahedral 3-fold axes.
Virology, 537, 2019
7B32
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MST3 in complex with MRIA7
分子名称: 8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-[(2-methoxyphenyl)amino]pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
著者Tesch, R, Rak, M, Joerger, A.C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-11-28
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-Based Design of Selective Salt-Inducible Kinase Inhibitors.
J.Med.Chem., 64, 2021
8C13
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Crystal structure of pVHL:ElonginC:ElonginB complex bound to PROTAC JW48
分子名称: (2~{S},4~{R})-1-[(2~{S})-2-[3-[2-[2-[2-(acetamidomethyl)-4-(6,7-dihydro-5~{H}-pyrrolo[1,2-a]imidazol-2-yl)phenoxy]ethoxy]ethoxy]propanoylamino]-3,3-dimethyl-butanoyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Kraemer, A, Weckesser, J, Knapp, S, Structural Genomics Consortium (SGC)
登録日2022-12-20
公開日2022-12-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tracking the PROTAC degradation pathway in living cells highlights the importance of ternary complex measurement for PROTAC optimization.
Cell Chem Biol, 30, 2023
6OLO
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Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Hexagonal Lattice from a Trimeric Coiled Coil
分子名称: COPPER (II) ION, Designed trimeric coiled coil peptide
著者Schieb, K.A, Horne, W.S.
登録日2019-04-16
公開日2020-03-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Understanding and controlling the metal-directed assembly of terpyridine-functionalized coiled-coil peptides.
Chem.Commun.(Camb.), 55, 2019
8EKO
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Sperm whale myoglobin mutant L29H F33W F43H (F33W CuBMb)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Ledray, A.P, Dwaraknath, S, Lu, Y.
登録日2022-09-21
公開日2022-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Tryptophan Can Promote Oxygen Reduction to Water in a Biosynthetic Model of Heme Copper Oxidases.
Biochemistry, 62, 2023
6X9Z
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De novo design of transmembrane beta-barrels
分子名称: Transmembrane beta-barrels
著者Bera, A.K, Vorobieva, A.A, Kang, A.S, Baker, D.
登録日2020-06-03
公開日2021-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献De novo design of transmembrane beta barrels.
Science, 371, 2021
8C7K
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YdaS from E. coli O157:H7 cryptic prophage CP-933P
分子名称: Phage antirepressor protein Cro
著者Prolic-Kalinsek, M, Volkov, A.N, Loris, R.
登録日2023-01-16
公開日2023-01-25
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023
6OWO
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CRYO-EM STRUCTURE OF PHOSPHORYLATED AP-2 CORE BOUND TO NECAP
分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
著者Partlow, E.A, Baker, R.W, Beacham, G.M, Chappie, J.S, Leschziner, A.E, Hollopeter, G.
登録日2019-05-10
公開日2019-09-11
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A structural mechanism for phosphorylation-dependent inactivation of the AP2 complex.
Elife, 8, 2019
6TUY
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Human LSD1/CoREST bound to the quinazoline inhibitor MC4106
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mattevi, A, Marrocco, B.
登録日2020-01-08
公開日2021-07-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Novel non-covalent LSD1 inhibitors endowed with anticancer effects in leukemia and solid tumor cellular models.
Eur.J.Med.Chem., 237, 2022
6TXJ
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Crystal structure of thermotoga maritima A42V E65D Ferritin
分子名称: EICOSANE, FE (III) ION, Ferritin, ...
著者Wilk, P, Grudnik, P, Kumar, M, Heddle, J, Chakraborti, S, Biela, A.P.
登録日2020-01-14
公開日2021-07-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献A single residue can modulate nanocage assembly in salt dependent ferritin.
Nanoscale, 13, 2021
5LUD
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Structure of Cyclophilin A in complex with 2,3-Diaminopyridine
分子名称: Peptidyl-prolyl cis-trans isomerase, pyridine-2,3-diamine
著者McNae, I.W, Nowicki, M.W, Blackburn, E.A, Wear, M.A, Walkinshaw, M.D.
登録日2016-09-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Thermo-kinetic analysis space expansion for cyclophilin-ligand interactions - identification of a new nonpeptide inhibitor using BiacoreTM T200.
FEBS Open Bio, 7, 2017
5J54
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The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
分子名称: Carotenoid oxygenase, FE (III) ION, OXYGEN MOLECULE, ...
著者McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2016-04-01
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
8C7Y
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Crystal structure of BRAF V600E in complex with a hybrid compound 6
分子名称: 1,2-ETHANEDIOL, NITRATE ION, Serine/threonine-protein kinase B-raf, ...
著者Chaikuad, A, Bonnet, P, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-01-17
公開日2023-02-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Design, synthesis and characterisation of a novel type II B-RAF paradox breaker inhibitor.
Eur.J.Med.Chem., 250, 2023
8C7X
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Crystal structure of BRAF in complex with a hybrid compound 6
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Serine/threonine-protein kinase B-raf, ...
著者Chaikuad, A, Bonnet, P, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-01-17
公開日2023-02-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Design, synthesis and characterisation of a novel type II B-RAF paradox breaker inhibitor.
Eur.J.Med.Chem., 250, 2023
8CLM
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1.80 A crystal structure of RNA/2'-O-methyl-RNA heteroduplex
分子名称: POTASSIUM ION, RNA (5'-R(*(UZL)*(OMU)P*(A2M)P*(OMG)P*(OMG)P*(A2M)P*(OMG)P*(A2M)P*(OMC)P*)-3'), RNA (5'-R(*G*UP*CP*UP*CP*CP*UP*AP*GP*)-3'), ...
著者Dolot, R.M, Maciaszek, A, Nawrot, B.C.
登録日2023-02-16
公開日2023-03-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of RNA/2'-O-methyl-RNA heteroduplex
To Be Published
6OR4
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Crystal structure of SpGH29
分子名称: Glycoside hydrolase, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Pluvinage, B, Boraston, A.B.
登録日2019-04-29
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
J.Biol.Chem., 294, 2019
6XJ7
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Crystal structure of the helical cell shape determining protein Pgp2 (K307A mutant) from Campylobacter jejuni
分子名称: Pgp2
著者Lin, C.S, Chan, A.C, Murphy, M.E.
登録日2020-06-23
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Peptidoglycan binding by a pocket on the accessory NTF2-domain of Pgp2 directs helical cell shape of Campylobacter jejuni.
J.Biol.Chem., 296, 2021
6XJ6
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Crystal structure of the helical cell shape determining protein Pgp2 from Campylobacter jejuni
分子名称: Pgp2
著者Lin, C.S, Chan, A.C, Murphy, M.E.
登録日2020-06-23
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.497 Å)
主引用文献Peptidoglycan binding by a pocket on the accessory NTF2-domain of Pgp2 directs helical cell shape of Campylobacter jejuni.
J.Biol.Chem., 296, 2021
6O7P
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Nitrogenase MoFeP mutant F99Y from Azotobacter vinelandii in the dithionite reduced state
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
著者Rutledge, H.L, Williamson, L.M, Tezcan, F.A.
登録日2019-03-08
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Redox-Dependent Metastability of the Nitrogenase P-Cluster.
J.Am.Chem.Soc., 141, 2019
5J79
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The identification and pharmacological characterization of 6-(tert-butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a highly potent and selective inhibitor of RIP2 Kinase, Compound 3 complex
分子名称: 4-methyl-3-{[6-(methylsulfonyl)quinolin-4-yl]amino}phenol, Receptor-interacting serine/threonine-protein kinase 2, SULFATE ION
著者Convery, M.A, Casillas, L.N, Haile, P.A, Votta, B.J, Lakdawala, A.S.
登録日2016-04-06
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献The Identification and Pharmacological Characterization of 6-(tert-Butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a Highly Potent and Selective Inhibitor of RIP2 Kinase.
J.Med.Chem., 59, 2016

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