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PDB: 89035 件

6Z55
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Crystal structure of CLK3 in complex with macrocycle ODS2004070
分子名称: 1,2-ETHANEDIOL, 7,10-Dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene-5-carboxylic acid, Dual specificity protein kinase CLK3, ...
著者Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-05-26
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of CLK3 in complex with macrocycle ODS2004070
To Be Published
6ZA1
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Structure of [NiFeSe] hydrogenase G491A variant from Desulfovibrio vulgaris Hildenborough pressurized with Oxygen gas - structure G491A-O2-hd
分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE (II) ION, GLYCEROL, ...
著者Zacarias, S, Temporao, A, Carpentier, P, van der Linden, P, Pereira, I.A.C, Matias, P.M.
登録日2020-06-04
公開日2020-09-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen.
J.Biol.Inorg.Chem., 25, 2020
7QPW
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X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (1)
分子名称: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Ribonuclease pancreatic, ...
著者Loreto, D, Merlino, A.
登録日2022-01-05
公開日2022-03-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
7QPY
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X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (3)
分子名称: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Ribonuclease pancreatic, ...
著者Loreto, D, Merlino, A.
登録日2022-01-05
公開日2022-03-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
7OML
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Bacillus subtilis phosphoglucomutase GlmM (metal bound)
分子名称: MAGNESIUM ION, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-24
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
7QF8
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Crystal structure of a bacterial pyranose 2-oxidase from Pseudoarthrobacter siccitolerans
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, GMC oxidoreductase family protein, ...
著者Borges, P.T, Frazao, T, Taborda, A, Frazao, C, Martins, L.O.
登録日2021-12-04
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.009 Å)
主引用文献Mechanistic insights into glycoside 3-oxidases involved in C-glycoside metabolism in soil microorganisms.
Nat Commun, 14, 2023
7OLH
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Bacillus subtilis Complex structure 1 of diadenylate cyclase CdaA cytoplasmic domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)
分子名称: Cyclic di-AMP synthase CdaA, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-20
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
6ZJ3
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Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
分子名称: 18S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Matzov, D, Halfon, H, Zimmerman, E, Rozenberg, H, Bashan, A, Gray, M.W, Yonath, A.E, Shalev-Benami, M.
登録日2020-06-27
公開日2020-10-07
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.
Nucleic Acids Res., 48, 2020
7OJR
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Bacillus subtilis phosphoglucomutase GlmM (phosphate bound)
分子名称: PHOSPHATE ION, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-17
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
7QEM
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bacterial IMPDH chimera
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase
著者Labesse, G, Gelin, M, Gedeon, A, Haouz, A, Munier-Lehmann, H.
登録日2021-12-03
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
7OJS
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Complex structure 2 of the Bacillus subtilis CdaA c-di-AMP cyclase domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)
分子名称: Cyclic di-AMP synthase CdaA, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-17
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
8FL6
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BU of 8fl6 by Molmil
Human nuclear pre-60S ribosomal subunit (State J1)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
7QFV
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Crystal structure of KLK6 in complex with compound 17a
分子名称: KLK6 Activity-Based Probe (Ahx-DPhe-Ser(Z)-Dht-Arg-DPP), Kallikrein-6
著者Jagtap, P.K.A, Zhang, L, De Vita, E, Tate, E.W, Hennig, J.
登録日2021-12-06
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献A KLK6 Activity-Based Probe Reveals a Role for KLK6 Activity in Pancreatic Cancer Cell Invasion.
J.Am.Chem.Soc., 144, 2022
6ZH8
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Cryo-EM structure of DNA-PKcs:DNA
分子名称: DNA (5'-D(P*AP*CP*TP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*AP*GP*TP*TP*TP*TP*TP*AP*GP*TP*T)-3'), DNA-dependent protein kinase catalytic subunit,DNA-PKcs
著者Chaplin, A.K, Hardwick, S.W, Chirgadze, D.Y, Blundell, T.L.
登録日2020-06-21
公開日2020-10-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Dimers of DNA-PK create a stage for DNA double-strand break repair.
Nat.Struct.Mol.Biol., 28, 2021
7NSD
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Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with ATP and calcium
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7NS8
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Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, Triphosphate tunnel metalloenzyme Saci_0718
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7NSF
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Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with triphosphate and magnesium
分子名称: MAGNESIUM ION, TRIPHOSPHATE, Triphosphate tunnel metalloenzyme Saci_0718
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7NSA
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Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with pyrophosphate and calcium
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
6Z5S
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RC-LH1(14)-W complex from Rhodopseudomonas palustris
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, (6~{R},10~{S},14~{R},19~{R},23~{S},24~{E},27~{S},28~{E})-2,6,10,14,19,23,27,31-octamethyldotriaconta-24,28-dien-2-ol, ...
著者Swainsbury, D.J.K, Qian, P, Hitchcock, A, Hunter, C.N.
登録日2020-05-27
公開日2021-01-13
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Structures of Rhodopseudomonas palustris RC-LH1 complexes with open or closed quinone channels.
Sci Adv, 7, 2021
6YUL
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CK2 alpha bound to Macrocycle
分子名称: 7,10-Dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene-5-carboxylic acid, Casein kinase II subunit alpha, SULFATE ION
著者Kraemer, A, Hanke, T, Kurz, C, Celik, I, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-27
公開日2020-07-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Optimization of pyrazolo[1,5-a]pyrimidines lead to the identification of a highly selective casein kinase 2 inhibitor.
Eur.J.Med.Chem., 208, 2020
7MWY
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Structure of the drosophila STING cyclic dinucleotide binding domain
分子名称: STING
著者Slavik, K.M, Ragucci, A.E, Kranzusch, P.J.
登録日2021-05-17
公開日2021-07-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila.
Nature, 597, 2021
7MWZ
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Structure of drosophila STING in complex with 3'2'-cGAMP
分子名称: 3'2'-cGAMP, STING
著者Slavik, K.M, Ragucci, A.E, Kranzusch, P.J.
登録日2021-05-17
公開日2021-07-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila.
Nature, 597, 2021
6YWN
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CutA in complex with CMPCPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, CALCIUM ION, CutA
著者Malik, D, Kobylecki, K, Krawczyk, P, Poznanski, J, Jakielaszek, A, Napiorkowska, A, Dziembowski, A, Tomecki, R, Nowotny, M.
登録日2020-04-29
公開日2020-08-05
最終更新日2020-09-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and mechanism of CutA, RNA nucleotidyl transferase with an unusual preference for cytosine.
Nucleic Acids Res., 48, 2020
6Z9O
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Structure of [NiFeSe] hydrogenase G491S variant from Desulfovibrio vulgaris Hildenborough pressurized with Oxygen gas - structure G491A-O2-ld
分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE (II) ION, GLYCEROL, ...
著者Zacarias, S, Temporao, A, Carpentier, P, van der Linden, P, Pereira, I.A.C, Matias, P.M.
登録日2020-06-04
公開日2020-09-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen.
J.Biol.Inorg.Chem., 25, 2020
7N44
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Crystal structure of the SARS-CoV-2 (2019-NCoV) main protease in complex with 5-(3-{3-chloro-5-[(5-methyl-1,3-thiazol-4-yl)methoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione (compound 13)
分子名称: 3C-like proteinase, 5-(3-{3-chloro-5-[(5-methyl-1,3-thiazol-4-yl)methoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione
著者Reilly, R.A, Zhang, C.H, Deshmukh, M.G, Ippolito, J.A, Hollander, K, Jorgensen, W.L, Anderson, K.S.
登録日2021-06-03
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Optimization of Triarylpyridinone Inhibitors of the Main Protease of SARS-CoV-2 to Low-Nanomolar Antiviral Potency.
Acs Med.Chem.Lett., 12, 2021

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件を2024-09-04に公開中

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