Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89472 件

4NCQ
DownloadVisualize
BU of 4ncq by Molmil
Crystal structure of NiSOD H1A mutant
分子名称: Superoxide dismutase [Ni]
著者Guce, A.I, Garman, S.C.
登録日2013-10-24
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Nickel superoxide dismutase: structural and functional roles of His1 and its H-bonding network.
Biochemistry, 54, 2015
6D0H
DownloadVisualize
BU of 6d0h by Molmil
ParT: Prs ADP-ribosylating toxin bound to cognate antitoxin ParS
分子名称: GLYCEROL, ParS: COG5642 (DUF2384) antitoxin, ParT: COG5654 (RES domain) toxin
著者Piscotta, F.J, Jeffrey, P.D, Link, A.J.
登録日2018-04-10
公開日2019-01-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献ParST is a widespread toxin-antitoxin module that targets nucleotide metabolism.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6VJ0
DownloadVisualize
BU of 6vj0 by Molmil
Crystal structure of a chitin-binding protein from Moringa oleifera seeds (Mo-CBP4)
分子名称: ACETATE ION, CHLORIDE ION, Chitin-binding protein Mo-CBP4
著者Bezerra, E.H.S, Lopes, T.D.P, da Silva, F.M.S, Costa, H.P.S, Freire, V.N, Rocha, B.A.M, Sousa, D.O.B.
登録日2020-01-14
公開日2021-01-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of a lectin from Moringa oleifera seeds with imflammatory activities
To Be Published
8CRB
DownloadVisualize
BU of 8crb by Molmil
Cryo-EM structure of PcrV/Fab(11-E5)
分子名称: Heavy chain, Light chain, Maltose/maltodextrin-binding periplasmic protein,Type III secretion protein PcrV
著者Yuan, B, Simonis, A, Marlovits, T.C.
登録日2023-03-08
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Discovery of highly neutralizing human antibodies targeting Pseudomonas aeruginosa.
Cell, 186, 2023
6D0X
DownloadVisualize
BU of 6d0x by Molmil
Crystal structure of chimeric H.2140 / K.1210 Fab in complex with circumsporozoite protein NANP3
分子名称: 1210 Antibody, light chain, 2140 Antibody, ...
著者Scally, S.W, Bosch, A, Imkeller, K, Wardemann, H, Julien, J.P.
登録日2018-04-11
公開日2018-06-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Antihomotypic affinity maturation improves human B cell responses against a repetitive epitope.
Science, 360, 2018
5I3V
DownloadVisualize
BU of 5i3v by Molmil
Crystal structure of BACE1 in complex with aminoquinoline compound 1
分子名称: (2R)-3-[2-amino-6-(3-methylpyridin-2-yl)quinolin-3-yl]-N-(3,3-dimethylbutyl)-2-methylpropanamide, Beta-secretase 1, GLYCEROL, ...
著者Whittington, D.A, Long, A.M.
登録日2016-02-11
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Fragment-Linking Approach Using (19)F NMR Spectroscopy To Obtain Highly Potent and Selective Inhibitors of beta-Secretase.
J.Med.Chem., 59, 2016
8CR9
DownloadVisualize
BU of 8cr9 by Molmil
Cryo-EM structure of PcrV/Fab(30-B8)
分子名称: Heavy chain, Maltose/maltodextrin-binding periplasmic protein,Type III secretion protein PcrV, light chain
著者Yuan, B, Simonis, A, Marlovits, T.C.
登録日2023-03-08
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Discovery of highly neutralizing human antibodies targeting Pseudomonas aeruginosa.
Cell, 186, 2023
3U6J
DownloadVisualize
BU of 3u6j by Molmil
Crystal structure of the VEGFR2 kinase domain in complex with a pyrazolone inhibitor
分子名称: N-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide, Vascular endothelial growth factor receptor 2
著者Whittington, D.A, Long, A, Rose, P, Gu, Y, Zhao, H.
登録日2011-10-12
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-based design of novel class II c-Met inhibitors: 1. Identification of pyrazolone-based derivatives.
J.Med.Chem., 55, 2012
3KDQ
DownloadVisualize
BU of 3kdq by Molmil
Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
分子名称: uncharacterized conserved protein
著者Zhang, R, Wu, R, Tan, K, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-10-23
公開日2009-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
To be Published
5URS
DownloadVisualize
BU of 5urs by Molmil
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P178
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kim, Y, Maltseva, N, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-02-12
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.388 Å)
主引用文献Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P178
To Be Published
7UHM
DownloadVisualize
BU of 7uhm by Molmil
Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (150 ms Snapshot)
分子名称: (2R)-2-[(R)-carboxy{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}methoxymethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-oxazine-4-carboxylic acid, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
著者Wilamowski, M, Kim, Y, Sherrell, D.A, Lavens, A, Henning, R, Maltseva, N, Endres, M, Babnigg, G, Srajer, V, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-03-27
公開日2022-06-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Time-resolved beta-lactam cleavage by L1 metallo-beta-lactamase.
Nat Commun, 13, 2022
5V7C
DownloadVisualize
BU of 5v7c by Molmil
Crystal structure of LARP1-unique domain DM15 bound 5'TOP RNA sequence
分子名称: La-related protein 1, RNA (5'-R(*CP*UP*UP*UP*UP*CP*CP*G)-3')
著者Berman, A.J, Lahr, R.M, Al-Ashtal, H.A.
登録日2017-03-20
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs.
Elife, 6, 2017
5OVW
DownloadVisualize
BU of 5ovw by Molmil
Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli
分子名称: GLYCEROL, Nanobody, Vitamin B12-binding protein
著者Mireku, S.A, Sauer, M.M, Glockshuber, R, Locher, K.P.
登録日2017-08-30
公開日2017-11-08
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structural basis of nanobody-mediated blocking of BtuF, the cognate substrate-binding protein of the Escherichia coli vitamin B12 transporter BtuCD.
Sci Rep, 7, 2017
4WW1
DownloadVisualize
BU of 4ww1 by Molmil
Crystal structure of human TCR Alpha Chain-TRAV21-TRAJ8 and Beta Chain-TRBV7-8
分子名称: TCR Alpha Chain-TRAV21-TRAJ8, TCR Beta Chain-TRBV7-8
著者Le Nours, J, Praveena, T, Pellicci, D.G, Lim, R.T, Besra, G, Howell, A.R, Godfrey, D.I, Rossjohn, J, Uldrich, A.P.
登録日2014-11-10
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens.
Nat Commun, 7, 2016
5KIH
DownloadVisualize
BU of 5kih by Molmil
Structural impact of single ribonucleotides in DNA
分子名称: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3')
著者Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
登録日2016-06-16
公開日2016-08-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
8D4R
DownloadVisualize
BU of 8d4r by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-02
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8BIK
DownloadVisualize
BU of 8bik by Molmil
Crystal structure of human AMPK heterotrimer in complex with allosteric activator C455
分子名称: (3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-[[6-chloranyl-5-[4-[4-[[dimethyl(oxidanyl)-$l^{4}-sulfanyl]amino]phenyl]phenyl]-3~{H}-imidazo[4,5-b]pyridin-2-yl]oxy]-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]furan-3-ol, 5'-AMP-activated protein kinase catalytic subunit alpha-2, 5'-AMP-activated protein kinase subunit beta-1, ...
著者Schimpl, M, Mather, K.M, Boland, M.L, Rivers, E.L, Srivastava, A, Hemsley, P, Robinson, J, Wan, P.T, Hansen, J, Read, J.A, Trevaskis, J.L, Smith, D.M.
登録日2022-11-02
公開日2024-05-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Direct beta 1/ beta 2 AMPK activation reduces liver steatosis but not fibrosis in a mouse model of non-alcoholic steatohepatitis
Biorxiv, 2024
5USD
DownloadVisualize
BU of 5usd by Molmil
Crystal structure of MccF-like protein (BA_5613) in the complex with aspartyl sulfamoyl adenylate
分子名称: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, GLYCEROL, Peptidase S66
著者Nocek, B, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-02-13
公開日2017-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Crystal structure of MccF-like protein (BA_5613) in the complex with aspartyl sulfamoyl adenylate
To Be Published
6D2J
DownloadVisualize
BU of 6d2j by Molmil
Beta Carbonic anhydrase in complex with thiocyanate
分子名称: Carbonic anhydrase, POTASSIUM ION, THIOCYANATE ION, ...
著者Murray, A, Aggarwal, M, Pinard, M, McKenna, R.
登録日2018-04-13
公開日2018-09-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Mapping of Anion Inhibitors to beta-Carbonic Anhydrase psCA3 from Pseudomonas aeruginosa.
ChemMedChem, 13, 2018
5KIB
DownloadVisualize
BU of 5kib by Molmil
Structural impact of single ribonucleotides in DNA
分子名称: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3')
著者Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
登録日2016-06-16
公開日2016-08-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
5DQQ
DownloadVisualize
BU of 5dqq by Molmil
Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
分子名称: CALCIUM ION, PALMITIC ACID, Two pore calcium channel protein 1, ...
著者Kintzer, A.F, Stroud, R.M.
登録日2015-09-15
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.872 Å)
主引用文献Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
Nature, 531, 2016
8BRH
DownloadVisualize
BU of 8brh by Molmil
Co-crystal structure of She4 with Myo4 peptide
分子名称: KLLA0E16699p, Myo4 peptide (LYS-PHE-ILE-VAL-SER-HIS-TYR)
著者Arnese, R, Gudino, R, Meinhart, A, Clausen, T.
登録日2022-11-23
公開日2024-06-05
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献UNC-45 assisted myosin folding depends on a conserved FX 3 HY motif implicated in Freeman Sheldon Syndrome.
Nat Commun, 15, 2024
6FZA
DownloadVisualize
BU of 6fza by Molmil
Crystal Structure of lipase from Geobacillus stearothermophilus T6 methanol stable variant A187F
分子名称: CALCIUM ION, Lipase, ZINC ION
著者Gihaz, S, Kanteev, M, Pazy, Y, Fishman, A.
登録日2018-03-14
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Filling the Void: Introducing Aromatic Interactions into Solvent Tunnels To Enhance Lipase Stability in Methanol.
Appl.Environ.Microbiol., 84, 2018
1LN6
DownloadVisualize
BU of 1ln6 by Molmil
STRUCTURE OF BOVINE RHODOPSIN (Metarhodopsin II)
分子名称: RETINAL, RHODOPSIN
著者Choi, G, Landin, J, Galan, J.F, Birge, R.R, Albert, A.D, Yeagle, P.L.
登録日2002-05-03
公開日2002-07-10
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Structural studies of metarhodopsin II, the activated form of the G-protein coupled receptor, rhodopsin.
Biochemistry, 41, 2002
4WY9
DownloadVisualize
BU of 4wy9 by Molmil
Crystal structure of the periplasmic sensory domain of the Campylobacter jejuni chemoreceptor Tlp1
分子名称: ACETATE ION, CHLORIDE ION, Putative MCP-type signal transduction protein
著者Roujeinikova, A, Machuca, M.A, Liu, Y.C.
登録日2014-11-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The crystal structure of the tandem-PAS sensing domain of Campylobacter jejuni chemoreceptor Tlp1 suggests indirect mechanism of ligand recognition.
J.Struct.Biol., 194, 2016

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon