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PDB: 88608 件

4S11
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Gelsolin nanobody shielding mutant plasma gelsolin from furin proteolysis
分子名称: GELSOLIN NANOBODY
著者Wongsantichon, J, Loonchanta, A, Robinson, R.C, Gettemans, J.
登録日2015-01-07
公開日2015-06-03
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献An ER-directed gelsolin nanobody targets the first step in amyloid formation in a gelsolin amyloidosis mouse model.
Hum.Mol.Genet., 24, 2015
2J2F
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The T199D Mutant of Stearoyl Acyl Carrier Protein Desaturase from Ricinus Communis (Castor Bean)
分子名称: ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, FE (III) ION
著者Guy, J.E, Abreu, I.A, Moche, M, Lindqvist, Y, Whittle, E, Shanklin, J.
登録日2006-08-16
公開日2006-10-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Single Mutation in the Castor {Delta}9-18:0- Desaturase Changes Reaction Partitioning from Desaturation to Oxidase Chemistry.
Proc.Natl.Acad.Sci.USA, 103, 2006
3EY0
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A new form of DNA-drug interaction in the minor groove of a coiled coil
分子名称: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, 5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DT)-3', MAGNESIUM ION
著者Pous, J, Moreno, T, Subirana, J.A, Campos, J.L.
登録日2008-10-17
公開日2009-10-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Coiled-coil conformation of a pentamidine-DNA complex
Acta Crystallogr.,Sect.D, 66, 2010
7SVQ
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Crystal Structure of L-galactose dehydrogenase from Spinacia oleracea in complex with NAD+
分子名称: L-galactose dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
登録日2021-11-19
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Characterization of L-Galactose Dehydrogenase: An Essential Enzyme for Vitamin C Biosynthesis.
Plant Cell.Physiol., 63, 2022
4W9C
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pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(oxazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 2)
分子名称: (4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-[4-(1,3-oxazol-5-yl)benzyl]-L-prolinamide, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, ...
著者Gadd, M.S, Hewitt, S, Galdeano, C, van Molle, I, Ciulli, A.
登録日2014-08-27
公開日2014-09-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities.
J.Med.Chem., 57, 2014
3EKV
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Crystal structure of the wild type HIV-1 protease with the inhibitor, Amprenavir
分子名称: ACETATE ION, Protease, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
著者Schiffer, C.A, Nalam, M.N.L.
登録日2008-09-19
公開日2009-09-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Extreme Entropy-Enthalpy Compensation in a Drug-Resistant Variant of HIV-1 Protease.
Acs Chem.Biol., 7, 2012
6PBM
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Pseudopaline Dehydrogenase with NADP+ bound
分子名称: 1,2-ETHANEDIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pseudopaline Dehydrogenase
著者McFarlane, J.S, Lamb, A.L.
登録日2019-06-14
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Staphylopine and pseudopaline dehydrogenase from bacterial pathogens catalyze reversible reactions and produce stereospecific metallophores.
J.Biol.Chem., 294, 2019
5CV4
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Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/V66H at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Theodoru, A, Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-07-25
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/V66H at cryogenic temperature
To be Published
2I88
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Crystal structure of the Channel-forming Domain of Colicin E1
分子名称: Colicin-E1
著者Elkins, P, Bunker, A, Cramer, W.A, Stauffacher, C.V.
登録日2006-09-01
公開日2006-09-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A mechanism for toxin insertion into membranes is suggested by the crystal structure of the channel-forming domain of colicin E1
Structure, 5, 1997
5K92
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Crystal Structure of an apo Tris-thiolate Binding Site in a de novo Three Stranded Coiled Coil Peptide
分子名称: Apo-(CSL16C)3, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ruckthong, L, Zastrow, M.L, Stuckey, J.A, Pecoraro, V.L.
登録日2016-05-31
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins.
J.Am.Chem.Soc., 138, 2016
3EVE
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Crystal structure of GpppA complex of yellow fever virus methyltransferase and S-adenosyl-L-homocysteine
分子名称: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE
著者Thompson, A.A.
登録日2008-10-13
公開日2009-01-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Analysis of flavivirus NS5 methyltransferase cap binding.
J.Mol.Biol., 385, 2009
6PDY
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Msp1-substrate complex in open conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Wang, L, Myasnikov, A, Pan, X, Walter, P.
登録日2019-06-19
公開日2020-02-12
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
Elife, 9, 2020
6PEB
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Crystal Structure of human NAMPT in complex with NVP-LTM976
分子名称: N-{4-[(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)methyl]phenyl}-3-(pyridin-3-yl)azetidine-1-carboxamide, Nicotinamide phosphoribosyltransferase, PHOSPHATE ION
著者Weihofen, W.A.
登録日2019-06-20
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Scaffold Morphing Identifies 3-Pyridyl Azetidine Ureas as Inhibitors of Nicotinamide Phosphoribosyltransferase (NAMPT).
Acs Med.Chem.Lett., 10, 2019
6I4R
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Crystal structure of the disease-causing R460G mutant of the human dihydrolipoamide dehydrogenase at 1.44 Angstrom resolution
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, mitochondrial, ...
著者Szabo, E, Wilk, P, Bui, D, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
登録日2018-11-10
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.439 Å)
主引用文献Underlying molecular alterations in human dihydrolipoamide dehydrogenase deficiency revealed by structural analyses of disease-causing enzyme variants.
Hum.Mol.Genet., 28, 2019
1JXN
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Crystal Structure of the Lectin I from Ulex europaeus in complex with the methyl glycoside of alpha-L-fucose
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CALCIUM ION, MANGANESE (II) ION, ...
著者Audette, G.F, Olson, D.J.H, Ross, A.R.S, Quail, J.W, Delbaere, L.T.J.
登録日2001-09-07
公開日2002-12-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Examination of the Structural Basis for O(H) Blood Group Specificity by Ulex europaeus Lectin I
Can.J.Chem., 80, 2002
6VRM
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T cell receptor-p53-HLA-A2 complex
分子名称: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen, ...
著者Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
登録日2020-02-08
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
7B6R
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Drosophila melanogaster TRAPPIII partial complex: core plus C8 and C11 attached region
分子名称: FI18195p1, GEO08327p1, Probable trafficking protein particle complex subunit 2, ...
著者Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
登録日2020-12-08
公開日2021-06-09
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
8A49
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Endoglycosidase S in complex with IgG1 Fc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG1 Fc, Secreted endoglycosidase EndoS
著者Sudol, A.S.L, Tews, I, Crispin, M.
登録日2022-06-10
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Extensive substrate recognition by the streptococcal antibody-degrading enzymes IdeS and EndoS.
Nat Commun, 13, 2022
3E5A
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Crystal structure of Aurora A in complex with VX-680 and TPX2
分子名称: CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, SULFATE ION, Serine/threonine-protein kinase 6, ...
著者Zhao, B, Smallwood, A, Lai, Z.
登録日2008-08-13
公開日2008-10-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Modulation of kinase-inhibitor interactions by auxiliary protein binding: crystallography studies on Aurora A interactions with VX-680 and with TPX2.
Protein Sci., 17, 2008
7B6D
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Drosophila melanogaster TRAPPCore (C1, C2, C2L, C3a/b, C4, C5, C6 subunits)
分子名称: GEO08327p1, Probable trafficking protein particle complex subunit 2, TRAPPC2L, ...
著者Galindo, A, Munro, S, Planelles-Herrero, V.J, Degliesposti, G.
登録日2020-12-07
公開日2021-06-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Cryo-EM structure of metazoan TRAPPIII, the multi-subunit complex that activates the GTPase Rab1.
Embo J., 40, 2021
2VE3
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Retinoic acid bound cyanobacterial CYP120A1
分子名称: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 120, RETINOIC ACID
著者Kuhnel, K, Ke, N, Sligar, S.G, Schuler, M.A, Schlichting, I.
登録日2007-10-15
公開日2008-04-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Substrate-Free and Retinoic Acid-Bound Cyanobacterial Cytochrome P450 Cyp120A1.
Biochemistry, 47, 2008
4IDI
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Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420
分子名称: GLYCEROL, Oryza sativa Rurm1-related
著者Wernimont, A.K, Tempel, W, Lew, J, Walker, J, Arrowsmith, C.H, Edwards, A.M, Schapira, M, Bountra, C, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
登録日2012-12-12
公開日2013-12-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420
To be Published
2V8S
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VTI1B HABC DOMAIN - EPSINR ENTH DOMAIN COMPLEX
分子名称: CLATHRIN INTERACTOR 1, GLYCEROL, VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1B
著者Owen, D.J, McCoy, A.J, Collins, B.M, Miller, S.E.
登録日2007-08-14
公開日2007-11-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献A Snare-Adaptor Interaction is a New Mode of Cargo Recognition in Clathrin Coated Vesicles
Nature, 450, 2007
5DEC
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BU of 5dec by Molmil
Crystal structure of the small alarmone synthetase 1 from Bacillus subtilis
分子名称: GTP pyrophosphokinase YjbM
著者Steinchen, W, Altegoer, A, Schuhmacher, J.S, Bange, G.
登録日2015-08-25
公開日2015-10-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Catalytic mechanism and allosteric regulation of an oligomeric (p)ppGpp synthetase by an alarmone.
Proc.Natl.Acad.Sci.USA, 112, 2015
6IC0
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Human PFKFB3 in complex with a N-Aryl 6-Aminoquinoxaline inhibitor 4
分子名称: 3-[[8-(1-methylindol-6-yl)quinoxalin-6-yl]amino]-~{N}-pyrimidin-5-yl-pyridine-4-carboxamide, 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3, ...
著者Banaszak, K, Pawlik, H, Bialas, A, Fabritius, C.H, Nowak, M.
登録日2018-12-01
公開日2019-01-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Synthesis of amide and sulfonamide substituted N-aryl 6-aminoquinoxalines as PFKFB3 inhibitors with improved physicochemical properties.
Bioorg. Med. Chem. Lett., 29, 2019

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