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PDB: 88675 results

6W9P
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Tel26 Parallel Four-quartet G-quadruplex with K+
Descriptor: DNA (5'-D(P*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), POTASSIUM ION, SODIUM ION
Authors:McCarthy, S.E, Yatsunyk, L.A, Beseiso, D, Miao, J.
Deposit date:2020-03-23
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
6GQK
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Crystal structure of human c-KIT kinase domain in complex with AZD3229-analogue (compound 23)
Descriptor: Mast/stem cell growth factor receptor Kit, ~{N}-[4-(6,7-dimethoxyquinazolin-4-yl)oxyphenyl]-2-(1-ethylpyrazol-4-yl)ethanamide
Authors:Schimpl, M, Hardy, C.J, Ogg, D.J, Overman, R.C, Packer, M.J, Kettle, J.G, Anjum, R, Barry, E, Bhavsar, D, Brown, C, Campbell, A, Goldberg, K, Grondine, M, Guichard, S, Hunt, T, Jones, O, Li, X, Moleva, O, Pearson, S, Shao, W, Smith, A, Smith, J, Stead, D, Stokes, S, Tucker, M, Ye, Y.
Deposit date:2018-06-07
Release date:2018-09-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Discovery of N-(4-{[5-Fluoro-7-(2-methoxyethoxy)quinazolin-4-yl]amino}phenyl)-2-[4-(propan-2-yl)-1 H-1,2,3-triazol-1-yl]acetamide (AZD3229), a Potent Pan-KIT Mutant Inhibitor for the Treatment of Gastrointestinal Stromal Tumors.
J. Med. Chem., 61, 2018
7TML
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BU of 7tml by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ...
Authors:Nguyen, A.I.
Deposit date:2022-01-19
Release date:2022-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework.
J.Am.Chem.Soc., 144, 2022
8VRJ
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BU of 8vrj by Molmil
Rigid body fitted model for gamma tubulin ring complex capped microtubule
Descriptor: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
Authors:Aher, A, Urnavicius, L, Kapoor, T.M.
Deposit date:2024-01-22
Release date:2024-03-27
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 31, 2024
7U2R
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BU of 7u2r by Molmil
Structure of Paenibacillus sp. J14 Apyc1
Descriptor: Apyc1, ZINC ION
Authors:Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
Deposit date:2022-02-24
Release date:2022-04-20
Last modified:2022-06-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
6GRZ
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BU of 6grz by Molmil
Crystal structure of the light chain dimer mH6
Descriptor: GLYCEROL, mH6
Authors:Maritan, M, Ricagno, S, Ambrosetti, A, Oberti, L.
Deposit date:2018-06-13
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inherent Biophysical Properties Modulate the Toxicity of Soluble Amyloidogenic Light Chains
J.Mol.Biol., 2020
7ZX0
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BU of 7zx0 by Molmil
Crystal structure of Pol theta polymerase domain in complex with compound 5
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-[5-bromanyl-3-cyano-6-methyl-4-(trifluoromethyl)pyridin-2-yl]oxy-~{N}-ethyl-~{N}-(3-methylphenyl)ethanamide, DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*(DDG))-3'), ...
Authors:Krajewski, W.W, Turnbull, A.P, Willis, S, Charles, M, Stockley, M, Heald, R.A.
Deposit date:2022-05-19
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Discovery, Characterization, and Structure-Based Optimization of Small-Molecule In Vitro and In Vivo Probes for Human DNA Polymerase Theta.
J.Med.Chem., 65, 2022
5IT6
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BU of 5it6 by Molmil
Galectin-related protein: an integral member of the network of chicken galectins
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Galectin-related protein, ...
Authors:Flores-Ibarra, A, Garcia-Caballero, G, Michalak, M, Bovin, N.V, Andre, S, Manning, J.C, Vertesy, S, Ruiz, F.M, Kaltner, H, Kopitz, J, Romero, A, Gabius, H.-J.
Deposit date:2016-03-16
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.547 Å)
Cite:Galectin-related protein: An integral member of the network of chicken galectins 1. From strong sequence conservation of the gene confined to vertebrates to biochemical characteristics of the chicken protein and its crystal structure.
Biochim.Biophys.Acta, 1860, 2016
4YS1
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BU of 4ys1 by Molmil
Human Aldose Reductase complexed with a ligand with an IDD structure (2) at 1.07 A.
Descriptor: 3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Rechlin, C, Heine, A, Klebe, G.
Deposit date:2015-03-16
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Price for Opening the Transient Specificity Pocket in Human Aldose Reductase upon Ligand Binding: Structural, Thermodynamic, Kinetic, and Computational Analysis.
ACS Chem. Biol., 12, 2017
5N6N
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BU of 5n6n by Molmil
CRYSTAL STRUCTURE OF THE 14-3-3:NEUTRAL TREHALASE NTH1 COMPLEX
Descriptor: CALCIUM ION, Neutral trehalase, Protein BMH1, ...
Authors:Alblova, M, Smidova, A, Obsilova, V, Obsil, T.
Deposit date:2017-02-15
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Molecular basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7N21
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BU of 7n21 by Molmil
NMR structure of AnIB-OH
Descriptor: Alpha-conotoxin AnIB
Authors:Conibear, A.C, Rosengren, K.J, Lee, H.S.
Deposit date:2021-05-28
Release date:2021-11-17
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
7N23
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BU of 7n23 by Molmil
NMR structure of AnIB[Y(SO3)16Y]-OH
Descriptor: Alpha-conotoxin AnIB
Authors:Conibear, A.C, Rosengren, K.J, Lee, H.S.
Deposit date:2021-05-28
Release date:2021-11-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
7N22
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BU of 7n22 by Molmil
NMR structure of AnIB[Y(SO3)16Y]-NH2
Descriptor: Alpha-conotoxin AnIB
Authors:Conibear, A.C, Rosengren, K.J, Lee, H.S.
Deposit date:2021-05-28
Release date:2021-11-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
8PTQ
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BU of 8ptq by Molmil
COMPLEX CRYSTAL STRUCTURE OF MUTANT HUMAN MONOGLYCERIDE LIPASE WITH COMPOUND 5l
Descriptor: 1,2-ETHANEDIOL, Monoglyceride lipase, methyl 4-[(2~{S},3~{R})-3-(4-fluorophenyl)-1-(1-methanoylpiperidin-4-yl)-4-oxidanylidene-azetidin-2-yl]benzoate
Authors:Butini, S, Grether, U, Benz, J, Leibrock, L, Maramai, S, Papa, A, Carullo, G, Federico, S, Grillo, A, Di Guglielmo, B, Lamponi, S, Gemma, S, Campiani, G.
Deposit date:2023-07-14
Release date:2024-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Development of Potent and Selective Monoacylglycerol Lipase Inhibitors. SARs, Structural Analysis, and Biological Characterization.
J.Med.Chem., 67, 2024
6T9N
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BU of 6t9n by Molmil
CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(4,5)P2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Wang, Q, Pike, A.C.W, Grieben, M, Baronina, A, Nasrallah, C, Shintre, C, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-10-28
Release date:2019-11-20
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Lipid Interactions of a Ciliary Membrane TRP Channel: Simulation and Structural Studies of Polycystin-2.
Structure, 28, 2020
4YU0
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BU of 4yu0 by Molmil
Crystal structure of a tetramer of GluA2 TR mutant ligand binding domains bound with glutamate at 1.26 Angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLUTAMIC ACID, Glutamate receptor 2,Glutamate receptor 2, ...
Authors:Chebli, M, Salazar, H, Baranovic, J, Carbone, A.L, Ghisi, V, Faelber, K, Lau, A.Y, Daumke, O, Plested, A.J.R.
Deposit date:2015-03-18
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the tetrameric GluA2 ligand-binding domain in complex with glutamate at 1.26 Angstroms resolution
To Be Published
8QN0
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Soluble epoxide hydrolase in complex with RK3
Descriptor: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-5-(4-methylphenyl)sulfonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-2-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
Authors:Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-09-25
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
7ZUS
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BU of 7zus by Molmil
Crystal structure of ternary complex of Pol theta polymerase domain
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*(DDG))-3'), DNA (5'-D(P*TP*TP*CP*CP*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*C)-3'), ...
Authors:Krajewski, W.W, Turnbull, A.P, Willis, S, Charles, M, Stockley, M, Heald, R.A.
Deposit date:2022-05-13
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Discovery, Characterization, and Structure-Based Optimization of Small-Molecule In Vitro and In Vivo Probes for Human DNA Polymerase Theta.
J.Med.Chem., 65, 2022
8QMZ
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BU of 8qmz by Molmil
Soluble epoxide hydrolase in complex with RK4
Descriptor: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-2-(4-methylphenyl)sulfonyl-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-5-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
Authors:Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-09-25
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
7TLS
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BU of 7tls by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ...
Authors:Nguyen, A.I.
Deposit date:2022-01-18
Release date:2022-04-20
Last modified:2022-04-27
Method:X-RAY DIFFRACTION (0.73 Å)
Cite:Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework.
J.Am.Chem.Soc., 144, 2022
6SNX
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BU of 6snx by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with benzamide
Descriptor: BENZAMIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-08-27
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
7N0T
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BU of 7n0t by Molmil
NMR structure of EpI[Y(SO)315Y]-OH
Descriptor: Alpha-conotoxin EpI
Authors:Conibear, A.C, Rosengren, K.J, Lee, H.S.
Deposit date:2021-05-26
Release date:2021-11-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
8VJB
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BU of 8vjb by Molmil
Cryo-EM structure of short form insulin receptor (IR-A) with four IGF2 bound, symmetric conformation.
Descriptor: Insulin-like growth factor II, Isoform Short of Insulin receptor
Authors:An, W, Hall, C, Li, J, Huang, A, Wu, J, Park, J, Bai, X.C, Choi, E.
Deposit date:2024-01-06
Release date:2024-03-27
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Activation of the insulin receptor by insulin-like growth factor 2.
Nat Commun, 15, 2024
7N20
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BU of 7n20 by Molmil
NMR structure of native AnIB
Descriptor: Alpha-conotoxin AnIB
Authors:Conibear, A.C, Rosengren, K.J, Lee, H.S.
Deposit date:2021-05-28
Release date:2021-11-17
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding.
Rsc Med Chem, 12, 2021
5N88
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BU of 5n88 by Molmil
Crystal structure of antibody bound to viral protein
Descriptor: PC4 and SFRS1-interacting protein, VH59 antibody
Authors:Bao, L, Hannon, C, Cruz-Migoni, A, Ptchelkine, D, Sun, M.-y, Derveni, M, Bunjobpol, W, Chambers, J.S, Simmons, A, Phillips, S.E.V, Rabbitts, T.H.
Deposit date:2017-02-23
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Intracellular immunization against HIV infection with an intracellular antibody that mimics HIV integrase binding to the cellular LEDGF protein.
Sci Rep, 7, 2017

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