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PDB: 89346 results

7MWR
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Structure of De Novo designed beta sheet heterodimer LHD101A53/B4
Descriptor: LHD101A54, LHD101B4, MALONATE ION
Authors:Bera, A.K, Sahtoe, D.D, Kang, A, Praetorius, F, Baker, D.
Deposit date:2021-05-17
Release date:2022-01-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reconfigurable asymmetric protein assemblies through implicit negative design.
Science, 375, 2022
8SF5
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BU of 8sf5 by Molmil
Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in open conformation
Descriptor: O-acetylhomoserine/O-acetylserine sulfhydrylase
Authors:Buller, A.R, Zmich, A.P, Bingman, C.A.
Deposit date:2023-04-10
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family.
Acs Catalysis, 13, 2023
8C7W
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BU of 8c7w by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2304
Descriptor: 1,2-ETHANEDIOL, 6-methyl-9-piperazin-1-yl-4-(3,4,5-trimethoxyphenyl)-5,7-dihydropyrido[4,3-d][2]benzazepine, Activin receptor type I, ...
Authors:Cros, J, Williams, E.P, Sweeney, M.N, Smil, D, Gonzalez-Alvarez, H, Al-awar, R, Bullock, A.N.
Deposit date:2023-01-17
Release date:2023-02-08
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Discovery of Conformationally Constrained ALK2 Inhibitors.
J.Med.Chem., 67, 2024
6VZG
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BU of 6vzg by Molmil
Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
Authors:Leschziner, A.E, Baker, R.W.
Deposit date:2020-02-28
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
5NKP
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BU of 5nkp by Molmil
Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
Descriptor: CHLORIDE ION, CITRIC ACID, Kelch-like protein 3, ...
Authors:Chen, Z, Sorrell, F.J, Pinkas, D.M, Williams, E, Mathea, S, Goubin, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Burgess-Brown, N, Bountra, C, Bullock, A.
Deposit date:2017-03-31
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide
To Be Published
6TK6
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BU of 6tk6 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: Dark structure in neutral conditions with attached light datasets at 800fs, 2ps, 100ps, 1ns, 16ns, 1us, 30us, 150us, 1ms and 20ms
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
Deposit date:2019-11-28
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
7N5F
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BU of 7n5f by Molmil
Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Down' conformation in GDN
Descriptor: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
Authors:Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
Deposit date:2021-06-05
Release date:2022-02-16
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
6TK4
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BU of 6tk4 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ns+16ns structure of KR2 with extrapolated, light and dark datasets
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
Deposit date:2019-11-28
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
7N5D
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BU of 7n5d by Molmil
Composite Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
Descriptor: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
Authors:Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
Deposit date:2021-06-05
Release date:2022-02-16
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
7B0B
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BU of 7b0b by Molmil
Fab HbnC3t1p1_C6 bound to SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, IGK@ protein, ...
Authors:Borenstein-Katz, A, Diskin, R.
Deposit date:2020-11-19
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Somatic hypermutation introduces bystander mutations that prepare SARS-CoV-2 antibodies for emerging variants.
Immunity, 56, 2023
7N5G
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BU of 7n5g by Molmil
Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Up' conformation in GDN
Descriptor: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
Authors:Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
Deposit date:2021-06-05
Release date:2022-02-16
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
6W0F
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BU of 6w0f by Molmil
Closed-gate KcsA soaked in 0mM KCl/5mM BaCl2
Descriptor: Fab Heavy Chain, Fab Light Chain, POTASSIUM ION, ...
Authors:Rohaim, A, Gong, L, Li, J.
Deposit date:2020-02-29
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
8C4I
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BU of 8c4i by Molmil
Ligand-free Crystal Structure of the decameric Sulfofructose Transaldolase BmSF-TAL
Descriptor: BmSF-TAL
Authors:Snow, A.J.D, Sharma, M, Davies, G.J.
Deposit date:2023-01-04
Release date:2023-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
Structure, 31, 2023
7T7G
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BU of 7t7g by Molmil
Imipenem-OXA-23 2 minute complex
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Beta-lactamase OXA-23
Authors:Smith, C.A, Stewart, N.K, Vakulenko, S.B.
Deposit date:2021-12-15
Release date:2022-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:C6 Hydroxymethyl-Substituted Carbapenem MA-1-206 Inhibits the Major Acinetobacter baumannii Carbapenemase OXA-23 by Impeding Deacylation.
Mbio, 13, 2022
7N5E
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BU of 7n5e by Molmil
Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
Descriptor: Mechanosensitive ion channel Flycatcher1, PALMITIC ACID
Authors:Jojoa-Cruz, S, Saotome, K, Lee, W.H, Patapoutian, A, Ward, A.B.
Deposit date:2021-06-05
Release date:2022-02-16
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights into the Venus flytrap mechanosensitive ion channel Flycatcher1.
Nat Commun, 13, 2022
8OJN
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BU of 8ojn by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Descriptor: Cell wall surface anchor family protein
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-24
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8RJC
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BU of 8rjc by Molmil
Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec61-TRAP, open conformation 1
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Lewis, A.J.O, Hegde, R.S.
Deposit date:2023-12-20
Release date:2024-01-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.90061 Å)
Cite:Structural analysis of the dynamic ribosome-translocon complex.
Elife, 13, 2024
8OML
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BU of 8oml by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd1334 C-terminal domains
Descriptor: Cell wall surface anchor family protein, PHOSPHATE ION
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-31
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8ONF
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BU of 8onf by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
Descriptor: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-04-02
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
7ZNF
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BU of 7znf by Molmil
ALTERNATING ZINC FINGERS IN THE HUMAN MALE ASSOCIATED PROTEIN ZFY: 2D NMR STRUCTURE OF AN EVEN FINGER AND IMPLICATIONS FOR "JUMPING-LINKER" DNA RECOGNITION
Descriptor: ZINC FINGER, ZINC ION
Authors:Kochoyan, M, Keutmann, H.T, Weiss, M.A.
Deposit date:1991-08-22
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Alternating zinc fingers in the human male associated protein ZFY: 2D NMR structure of an even finger and implications for "jumping-linker" DNA recognition.
Biochemistry, 30, 1991
3MJB
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BU of 3mjb by Molmil
Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to sulfate
Descriptor: Domain 3 of the cricket paralysis virus intergenic region IRES RNA, RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3'), SULFATE ION
Authors:Kieft, J.S, Golden, B.L, Costantino, D.A, Chase, E.
Deposit date:2010-04-12
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Identification and characterization of anion binding sites in RNA.
Rna, 16, 2010
8ONC
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BU of 8onc by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Descriptor: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-04-01
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8BZ3
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BU of 8bz3 by Molmil
Structure od the carbohydrate reconition domain of Gal3 in comples with SAF-2-010
Descriptor: Galectin-3, [(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate
Authors:Medrano, F.J, Romero, A.
Deposit date:2022-12-14
Release date:2023-03-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Selectively Modified Lactose and N -Acetyllactosamine Analogs at Three Key Positions to Afford Effective Galectin-3 Ligands.
Int J Mol Sci, 24, 2023
5NFE
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BU of 5nfe by Molmil
Neutron structure of human transthyretin (TTR) T119M mutant at room temperature to 1.85A resolution
Descriptor: Transthyretin
Authors:Yee, A.W, Moulin, M, Blakeley, M.P, Ostermann, A, Cooper, J.B, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
Deposit date:2017-03-14
Release date:2019-01-02
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.853 Å), X-RAY DIFFRACTION
Cite:A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
5NNR
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BU of 5nnr by Molmil
Structure of Naa15/Naa10 bound to HypK-THB
Descriptor: HypK, N-terminal acetyltransferase-like protein, Naa10
Authors:Weyer, F.A, Gumiero, A, Kopp, J, Sinning, I.
Deposit date:2017-04-10
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of HypK regulating N-terminal acetylation by the NatA complex.
Nat Commun, 8, 2017

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