6X6H
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8GCW
| Stx2A1(Y77A)-P6 peptide | Descriptor: | P stalk protein, rRNA N-glycosylase | Authors: | Rudolph, M.J, Li, X.P. | Deposit date: | 2023-03-03 | Release date: | 2024-03-06 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structure of the Stx2A1(Y77A) in complex with P6 peptide. To Be Published
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4Z9K
| Ricin A chain bound to camelid nanobody (VHH2)(F5) | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, Ricin, ... | Authors: | Rudolph, M.J. | Deposit date: | 2015-04-10 | Release date: | 2016-07-20 | Last modified: | 2019-12-11 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structural analysis of nested neutralizing and non-neutralizing B cell epitopes on ricin toxin's enzymatic subunit. Proteins, 84, 2016
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5E1H
| Ricin toxin in complex with neutralizing single chain monoclonal antibodies (VHHs) | Descriptor: | CHLORIDE ION, F8(JOB10) VHH antibody, Ricin | Authors: | Rudolph, M.J, Vance, D, Shoemaker, C, Mantis, N. | Deposit date: | 2015-09-29 | Release date: | 2016-08-03 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (2.032 Å) | Cite: | Structural analysis of nested neutralizing and non-neutralizing B cell epitopes on ricin toxin's enzymatic subunit. Proteins, 84, 2016
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6CWK
| Anti-RTA VHH antibody | Descriptor: | 1,2-ETHANEDIOL, Anti-Ricin antibody, CHLORIDE ION, ... | Authors: | Rudolph, M.J, Mantis, N. | Deposit date: | 2018-03-30 | Release date: | 2019-01-16 | Last modified: | 2019-12-18 | Method: | X-RAY DIFFRACTION (1.256 Å) | Cite: | Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity. Protein Eng. Des. Sel., 31, 2018
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6CWG
| Ricin catalytic subunit bound go A9 VHH antibody | Descriptor: | CHLORIDE ION, Ricin, VHH antibody | Authors: | Rudolph, M.J, Mantis, N. | Deposit date: | 2018-03-30 | Release date: | 2019-01-16 | Last modified: | 2019-12-18 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity. Protein Eng. Des. Sel., 31, 2018
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8TAB
| RTA-PD00589 | Descriptor: | 1,2-ETHANEDIOL, 4H,5H-naphtho[1,2-b]thiophene-2-carboxylic acid, CHLORIDE ION, ... | Authors: | Rudolph, M.J, Tumer, N. | Deposit date: | 2023-06-27 | Release date: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
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8T9V
| RTA-RUNT-59 complex structure | Descriptor: | (9aP)-7-fluoro-4,5-dihydronaphtho[1,2-b]thiophene-2-carboxylic acid, NONAETHYLENE GLYCOL, Ricin | Authors: | Rudolph, M.J, Tumer, N. | Deposit date: | 2023-06-26 | Release date: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.945 Å) | Cite: | Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
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8TAD
| RTA in complex with inhibitor RUNT-206 | Descriptor: | (9aM)-5,5-dimethyl-4,5-dihydronaphtho[1,2-b]thiophene-2-carboxylic acid, CHLORIDE ION, NONAETHYLENE GLYCOL, ... | Authors: | Rudolph, M.J, Tumer, N. | Deposit date: | 2023-06-27 | Release date: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.76 Å) | Cite: | Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
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8SZ2
| Stx2A1 bound to P8 stalk peptide | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, NONAETHYLENE GLYCOL, ... | Authors: | rudolph, M.J, Li, X.P. | Deposit date: | 2023-05-26 | Release date: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | Structure of Shiga toxin 2 A1 subunit with peptides that bind at the ribosome binding site and inhibit activity To Be Published
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6OBC
| Ricin A chain bound to camelid | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, Ricin A chain, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-20 | Release date: | 2020-04-01 | Last modified: | 2020-10-14 | Method: | X-RAY DIFFRACTION (1.762 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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6OBE
| Ricin A chain bound to VHH antibody V6H8 | Descriptor: | 1,2-ETHANEDIOL, IMIDAZOLE, NICKEL (II) ION, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-20 | Release date: | 2020-04-01 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.732 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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6OBO
| Ricin A chain bound to VHH antibody V6A6 | Descriptor: | 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-21 | Release date: | 2020-04-01 | Last modified: | 2020-10-14 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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6OBG
| Ricin A chain bound to VHH antibody V8E6 | Descriptor: | CHLORIDE ION, Ricin A chain, VHH antibody V8E6, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-20 | Release date: | 2020-04-01 | Last modified: | 2020-10-14 | Method: | X-RAY DIFFRACTION (1.996 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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5BOZ
| Ricin A chain bound to camelid nanobody (VHH9)(E1) | Descriptor: | CHLORIDE ION, Ricin, SULFATE ION, ... | Authors: | Rudolph, M.J, Mantis, N. | Deposit date: | 2015-05-27 | Release date: | 2016-12-07 | Last modified: | 2019-12-11 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit. J. Biol. Chem., 292, 2017
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6OCD
| Ricin A chain bound to VHH antibody V6D4 | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-22 | Release date: | 2020-04-01 | Last modified: | 2020-10-14 | Method: | X-RAY DIFFRACTION (2.103 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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6OBM
| Ricin A chain bound to VHH antibody V6A7 | Descriptor: | CHLORIDE ION, Ricin A chain, VHH antibody V6A7 | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-21 | Release date: | 2020-04-01 | Last modified: | 2020-10-14 | Method: | X-RAY DIFFRACTION (2.495 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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6OCA
| Ricin A chain bound to VHH antibody V2G10 | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, Ricin A chain, ... | Authors: | Rudolph, M.J. | Deposit date: | 2019-03-22 | Release date: | 2020-04-01 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.113 Å) | Cite: | Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site. J.Mol.Biol., 432, 2020
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1NVJ
| Deletion Mutant (Delta 141) of Molybdopterin Synthase | Descriptor: | FORMIC ACID, GLYCEROL, Molybdopterin converting factor subunit 2, ... | Authors: | Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H. | Deposit date: | 2003-02-03 | Release date: | 2003-05-06 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism J.Biol.Chem., 278, 2003
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1NVI
| Orthorhombic Crystal Form of Molybdopterin Synthase | Descriptor: | GLYCEROL, Molybdopterin converting factor subunit 1, Molybdopterin converting factor subunit 2, ... | Authors: | Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H. | Deposit date: | 2003-02-03 | Release date: | 2003-05-06 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism J.Biol.Chem., 278, 2003
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8CX8
| Stx2A1-BTB13086 | Descriptor: | 1,2-ETHANEDIOL, 5-(4-chlorophenyl)furan-2-carboxylic acid, CHLORIDE ION, ... | Authors: | Rudolph, M.J, Li, X.P. | Deposit date: | 2022-05-20 | Release date: | 2024-03-06 | Method: | X-RAY DIFFRACTION (1.905 Å) | Cite: | Stx2A1-BTB13086 To Be Published
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3HYH
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1FM0
| MOLYBDOPTERIN SYNTHASE (MOAD/MOAE) | Descriptor: | CHLORIDE ION, MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 1, ... | Authors: | Rudolph, M.J, Wuebbens, M.M, Rajagolpalan, K.V, Schindelin, H. | Deposit date: | 2000-08-15 | Release date: | 2001-01-17 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Crystal structure of molybdopterin synthase and its evolutionary relationship to ubiquitin activation. Nat.Struct.Biol., 8, 2001
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1FMA
| MOLYBDOPTERIN SYNTHASE (MOAD/MOAE) | Descriptor: | CHLORIDE ION, MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 1, ... | Authors: | Rudolph, M.J, Wuebbens, M.M, Rajagolpalan, K.V, Schindelin, H. | Deposit date: | 2000-08-16 | Release date: | 2001-01-17 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | Crystal structure of molybdopterin synthase and its evolutionary relationship to ubiquitin activation. Nat.Struct.Biol., 8, 2001
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2NYE
| Crystal structure of the Bateman2 domain of yeast Snf4 | Descriptor: | Nuclear protein SNF4 | Authors: | Rudolph, M.J, Amodeo, G.A, Iram, S, Hong, S, Pirino, G, Carlson, M, Tong, L. | Deposit date: | 2006-11-20 | Release date: | 2006-12-12 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of the Bateman2 domain of yeast Snf4: dimeric association and relevance for AMP binding. Structure, 15, 2007
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