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2QFN
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BU of 2qfn by Molmil
X-ray Crystal Structure Analysis of the Binding Site in the Ferric and Oxyferrous Forms of the Recombinant Heme Dehaloperoxidase Cloned from Amphitrite ornata
Descriptor: AMMONIUM ION, Dehaloperoxidase A, OXYGEN MOLECULE, ...
Authors:de Serrano, V, Chen, Z, Davis, M.F, Franzen, S.
Deposit date:2007-06-27
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:X-ray crystal structural analysis of the binding site in the ferric and oxyferrous forms of the recombinant heme dehaloperoxidase cloned from Amphitrite ornata
Acta Crystallogr.,Sect.D, 63, 2007
3K3U
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BU of 3k3u by Molmil
The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:de Serrano, V, Davis, M.F, Franzen, S.
Deposit date:2009-10-05
Release date:2010-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
To be Published
6MRJ
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BU of 6mrj by Molmil
Crystal structure of H.pylori NikR in complex with DNA
Descriptor: DNA (36-MER), MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Pozharski, E, de Serrano, V.
Deposit date:2018-10-13
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of H.pylori NikR in complex with DNA
To Be Published
5CCA
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BU of 5cca by Molmil
Crystal structure of Mtb toxin
Descriptor: Endoribonuclease MazF3
Authors:Cascio, D, Arbing, M, de Serrano, V, Eisenberg, D, Miallau, L, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-07-01
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Mtb toxin
To Be Published
1U8Y
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BU of 1u8y by Molmil
CRystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Ral-A
Authors:Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
Deposit date:2004-08-09
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
1U90
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BU of 1u90 by Molmil
Crystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Ral-A
Authors:Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
Deposit date:2004-08-09
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
1U8Z
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BU of 1u8z by Molmil
Crystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Ral-A
Authors:Nicely, N.I, Kosak, J, de Serrano, V, Mattos, C.
Deposit date:2004-08-09
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap
Structure, 12, 2004
1P2S
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BU of 1p2s by Molmil
H-Ras 166 in 50% 2,2,2 triflouroethanol
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, TRIFLUOROETHANOL, ...
Authors:Buhrman, G.K, de Serrano, V, Mattos, C.
Deposit date:2003-04-16
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Organic Solvents Order the Dynamic Switch II in Ras Crystals
Structure, 11, 2003
1P2V
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BU of 1p2v by Molmil
H-RAS 166 in 60 % 1,6 hexanediol
Descriptor: HEXANE-1,6-DIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Buhrman, G.K, de Serrano, V, Mattos, C.
Deposit date:2003-04-16
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
1P2T
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BU of 1p2t by Molmil
H-Ras 166 in Aqueous mother liqour, RT
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Transforming protein p21/H-RAS-1
Authors:Buhrman, G.K, de Serrano, V, Mattos, C.
Deposit date:2003-04-16
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
1P2U
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BU of 1p2u by Molmil
H-Ras in 50% isopropanol
Descriptor: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Buhrman, G.K, de Serrano, V, Mattos, C.
Deposit date:2003-04-16
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Organic solvents order the dynamic switch II in Ras crystals
Structure, 11, 2003
3IXF
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BU of 3ixf by Molmil
Crystal Structure of Dehaloperoxidase B at 1.58 and Structural Characterization of the AB Dimer from Amphitrite ornata
Descriptor: Dehaloperoxidase B, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, D'Antonio, J, Thompson, M.K, Franzen, S, Ghiladi, R.A.
Deposit date:2009-09-03
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure of dehaloperoxidase B at 1.58 A resolution and structural characterization of the AB dimer from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 66, 2010
3ORD
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BU of 3ord by Molmil
Structural Evidence for Stabilization of Inhibitor Binding by a Protein Cavity in the Dehaloperoxidase-Hemoglobin from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:de Serrano, V.S, Franzen, S.
Deposit date:2010-09-06
Release date:2011-09-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural evidence for stabilization of inhibitor binding by a protein cavity in the dehaloperoxidase-hemoglobin from Amphitrite ornata.
Biopolymers, 98, 2012
4ERO
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BU of 4ero by Molmil
Study on structure and function relationships in human Pirin with Cobalt ion
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, Pirin
Authors:Liu, F, Rehmani, I, Fu, R, Esaka, S, Chen, L, Serrano, V, Liu, A.
Deposit date:2012-04-20
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
4EWA
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BU of 4ewa by Molmil
Study on structure and function relationships in human Pirin with Fe ion
Descriptor: FE (III) ION, Pirin
Authors:Liu, F, Rehmani, I, Chen, L, Fu, R, Serrano, V, Wilson, D.W, Liu, A.
Deposit date:2012-04-26
Release date:2013-05-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
7M1K
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BU of 7m1k by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-difluorophenol
Descriptor: 2,6-DIFLUOROPHENOL, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
7M1J
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BU of 7m1j by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-dibromophenol
Descriptor: 2,6-bis(bromanyl)phenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
7M1I
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BU of 7m1i by Molmil
Crystal structure of dehaloperoxidase B in complex with 2,6-dichlorophenol
Descriptor: 2,6-dichlorophenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2021-03-13
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Bridging the functional gap between reactivity and inhibition in dehaloperoxidase B from Amphitrite ornata: Mechanistic and structural studies with 2,4- and 2,6-dihalophenols.
J.Inorg.Biochem., 236, 2022
8EJN
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BU of 8ejn by Molmil
Structure of dehaloperoxidase A in complex with 2,4-dichlorophenol
Descriptor: 2,4-dichlorophenol, DIMETHYL SULFOXIDE, Dehaloperoxidase A, ...
Authors:Aktar, M.S, de Serrano, V.S, Franzen, S.
Deposit date:2022-09-17
Release date:2023-08-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B.
J.Inorg.Biochem., 247, 2023
6CRE
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BU of 6cre by Molmil
Dehaloperoxidase B in complex with 5-Br-ortho-guaiacol
Descriptor: 5-bromo-2-methoxyphenol, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2018-03-17
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
6CH6
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BU of 6ch6 by Molmil
Dehaloperoxidase B in complex with substrate 2,4-dimethoxyphenol
Descriptor: 2,4-dimethoxyphenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-22
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
6CH5
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BU of 6ch5 by Molmil
Dehaloperoxidase B in complex with substrate 4-Nitroguaiacol
Descriptor: 2-methoxy-4-nitrophenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase B, ...
Authors:de Serrano, V.S, Carey, L.M, Ghiladi, R.A.
Deposit date:2018-02-21
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase.
Biochemistry, 57, 2018
3DR9
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BU of 3dr9 by Molmil
Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Chen, X, de Serrano, V.S, Betts, L, Franzen, S.
Deposit date:2008-07-10
Release date:2009-01-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata.
Acta Crystallogr.,Sect.D, 65, 2009
4EWE
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BU of 4ewe by Molmil
Study on structure and function relationships in human Pirin with Manganese ion
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, Pirin
Authors:Liu, F, Rehmani, I, Fu, R, Esaka, S, Chen, L, Serrano, V, Liu, A.
Deposit date:2012-04-26
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
4EWD
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BU of 4ewd by Molmil
Study on structure and function relationships in human Pirin with Mn ion
Descriptor: MANGANESE (II) ION, Pirin
Authors:Liu, F, Rehmani, I, Chen, L, Fu, R, Serrano, V, Wilson, D.W, Liu, A.
Deposit date:2012-04-26
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013

 

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