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4QFK
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BU of 4qfk by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913
Descriptor: ABC transporter periplasmic peptide-binding protein
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2014-05-21
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
5GMR
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BU of 5gmr by Molmil
Crystal structure of the mutant M3+S202W/I203F of the esterase E40
Descriptor: Esterase
Authors:Zhang, Y.-Z, Li, P.-Y.
Deposit date:2016-07-15
Release date:2017-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Insights into the Improvement of the Halotolerance of a Marine Microbial Esterase by Increasing Intra- and Interdomain Hydrophobic Interactions.
Appl. Environ. Microbiol., 83, 2017
5GMS
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BU of 5gms by Molmil
Crystal structure of the mutant S202W/I203F of the esterase E40
Descriptor: Esterase
Authors:Zhang, Y.-Z, Li, P.-Y.
Deposit date:2016-07-15
Release date:2017-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Mechanistic Insights into the Improvement of the Halotolerance of a Marine Microbial Esterase by Increasing Intra- and Interdomain Hydrophobic Interactions.
Appl. Environ. Microbiol., 83, 2017
4RZZ
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BU of 4rzz by Molmil
Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP in complex with phosphate
Descriptor: FE (III) ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Zhang, Y, Wang, P.
Deposit date:2014-12-27
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and molecular basis for the novel catalytic mechanism and evolution of DddP, an abundant peptidase-like bacterial Dimethylsulfoniopropionate lyase: a new enzyme from an old fold.
Mol.Microbiol., 98, 2015
4S00
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BU of 4s00 by Molmil
Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP mutant Y366A in complex with acrylate
Descriptor: ACRYLIC ACID, FE (III) ION, GLYCEROL, ...
Authors:Zhang, Y, Wang, P.
Deposit date:2014-12-27
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural and molecular basis for the novel catalytic mechanism and evolution of DddP, an abundant peptidase-like bacterial Dimethylsulfoniopropionate lyase: a new enzyme from an old fold.
Mol.Microbiol., 98, 2015
4RZY
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BU of 4rzy by Molmil
Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP in complex with MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FE (III) ION, Peptidase M24
Authors:Zhang, Y, Wang, P.
Deposit date:2014-12-26
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Structural and molecular basis for the novel catalytic mechanism and evolution of DddP, an abundant peptidase-like bacterial Dimethylsulfoniopropionate lyase: a new enzyme from an old fold.
Mol.Microbiol., 98, 2015
4S01
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BU of 4s01 by Molmil
Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP mutant D377N in complex with acrylate
Descriptor: ACRYLIC ACID, FE (III) ION, GLYCEROL, ...
Authors:Zhang, Y, Wang, P.
Deposit date:2014-12-27
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and molecular basis for the novel catalytic mechanism and evolution of DddP, an abundant peptidase-like bacterial Dimethylsulfoniopropionate lyase: a new enzyme from an old fold.
Mol.Microbiol., 98, 2015
4Q8K
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BU of 4q8k by Molmil
Crystal structure of polysaccharide lyase family 18 aly-SJ02 P-CATD
Descriptor: Alginase, CALCIUM ION, SULFATE ION
Authors:Dong, S, Li, C.Y, Zhang, Y.Z.
Deposit date:2014-04-28
Release date:2014-09-17
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (1.646 Å)
Cite:Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
4Q8L
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BU of 4q8l by Molmil
Crystal structure of polysacchride lyase family 18 aly-SJ02 r-CATD
Descriptor: Alginase, CALCIUM ION
Authors:Dong, S, Li, C.Y, Zhang, Y.Z.
Deposit date:2014-04-28
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
8GOF
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BU of 8gof by Molmil
Structure of hSLC19A1+PMX
Descriptor: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, Reduced folate transporter
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-08-24
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
8GOE
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BU of 8goe by Molmil
Structure of hSLC19A1+5-MTHF
Descriptor: N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, Reduced folate transporter
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-08-24
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
6KBW
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BU of 6kbw by Molmil
Crystal structure of Tmm from Myroides profundi D25
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Trimethylamine monooxygenase
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2019-06-26
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.686 Å)
Cite:Oxidation of trimethylamine to trimethylamine N-oxide facilitates high hydrostatic pressure tolerance in a generalist bacterial lineage.
Sci Adv, 7, 2021
5XKY
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BU of 5xky by Molmil
Crystal structure of DddY Se derivative
Descriptor: Uncharacterized protein, ZINC ION
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2017-05-10
Release date:2017-11-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
5XKX
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BU of 5xkx by Molmil
Crystal structure of WT DddY
Descriptor: ACETATE ION, Uncharacterized protein, ZINC ION
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2017-05-10
Release date:2017-11-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
5Y4K
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BU of 5y4k by Molmil
Crystal structure of DddY mutant Y260A
Descriptor: ACRYLIC ACID, DMSP lyase DddY, ZINC ION
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2017-08-03
Release date:2017-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
6IK4
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BU of 6ik4 by Molmil
A Novel M23 Metalloprotease Pseudoalterin from Deep-sea
Descriptor: Elastinolytic metalloprotease, GLYCEROL, ZINC ION
Authors:Zhao, H.L, Tang, B.L, Yang, J, Chen, X.L, Zhang, Y.Z.
Deposit date:2018-10-14
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A predator-prey interaction between a marine Pseudoalteromonas sp. and Gram-positive bacteria.
Nat Commun, 11, 2020
7DDY
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BU of 7ddy by Molmil
Crystal structure of an acetyl xylan esterase AlAXEase
Descriptor: G-D-S-L family lipolytic protein
Authors:Zhang, Y, Li, P.Y, Zhang, Y.Z.
Deposit date:2020-10-30
Release date:2021-06-02
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (2.505 Å)
Cite:Active site architecture of an acetyl xylan esterase indicates a novel cold adaptation strategy.
J.Biol.Chem., 297, 2021
6IIJ
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BU of 6iij by Molmil
Cryo-EM structure of CV-A10 mature virion
Descriptor: SPHINGOSINE, VP1, VP2, ...
Authors:Chen, J.H, Ye, X.H, Cong, Y, Huang, Z.
Deposit date:2018-10-06
Release date:2018-11-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Coxsackievirus A10 atomic structure facilitating the discovery of a broad-spectrum inhibitor against human enteroviruses.
Cell Discov, 5, 2019
6IIO
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BU of 6iio by Molmil
Cryo-EM structure of CV-A10 native empty particle
Descriptor: VP0, VP1, VP3
Authors:Chen, J.H, Ye, X.H, Cong, Y, Huang, Z.
Deposit date:2018-10-07
Release date:2018-11-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Coxsackievirus A10 atomic structure facilitating the discovery of a broad-spectrum inhibitor against human enteroviruses.
Cell Discov, 5, 2019
7CZH
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BU of 7czh by Molmil
PL24 ulvan lyase-Uly1
Descriptor: CALCIUM ION, GLYCEROL, Uly1
Authors:Zhang, Y.Z, Chen, X.L, Dong, F, Xu, F.
Deposit date:2020-09-08
Release date:2021-04-07
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Mechanistic Insights into Substrate Recognition and Catalysis of a New Ulvan Lyase of Polysaccharide Lyase Family 24.
Appl.Environ.Microbiol., 87, 2021
7DRQ
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BU of 7drq by Molmil
Crystal structure of polysaccharide lyase Uly1
Descriptor: CALCIUM ION, Uly1
Authors:Chen, X.L, Cao, H.Y, Xu, F, Dong, F.
Deposit date:2020-12-29
Release date:2021-03-31
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Mechanistic Insights into Substrate Recognition and Catalysis of a New Ulvan Lyase of Polysaccharide Lyase Family 24.
Appl.Environ.Microbiol., 87, 2021
7XQ0
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BU of 7xq0 by Molmil
Structure of hSLC19A1+3'3'-CDA
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Reduced folate transporter
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-05-06
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
7XPZ
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BU of 7xpz by Molmil
Structure of Apo-hSLC19A1
Descriptor: Reduced folate transporter
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-05-06
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
7XQ2
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BU of 7xq2 by Molmil
Structure of hSLC19A1+2'3'-cGAMP
Descriptor: Reduced folate transporter, cGAMP
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-05-06
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
7XQ1
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BU of 7xq1 by Molmil
Structure of hSLC19A1+2'3'-CDAS
Descriptor: (1~{R},3~{S},6~{R},8~{R},9~{R},10~{S},12~{S},15~{R},17~{R},18~{R})-8,17-bis(6-aminopurin-9-yl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecane-9,18-diol, Reduced folate transporter
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-05-06
Release date:2022-10-05
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022

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