Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7X4M
DownloadVisualize
BU of 7x4m by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10, 2E6 and 9A3)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X47
DownloadVisualize
BU of 7x47 by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 2E6 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, Genome polyprotein, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X46
DownloadVisualize
BU of 7x46 by Molmil
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 2E6 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3F
DownloadVisualize
BU of 7x3f by Molmil
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 9A3 (CVB1-A:9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2O
DownloadVisualize
BU of 7x2o by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 2E6 (CVB1-M:2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-25
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2T
DownloadVisualize
BU of 7x2t by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (CVB1-M:8A10)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-26
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X4K
DownloadVisualize
BU of 7x4k by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (classified from CVB1 mature virion in complex with 8A10 and 9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, Genome polyprotein, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3D
DownloadVisualize
BU of 7x3d by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 9A3 (CVB1-M:9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
8IFY
DownloadVisualize
BU of 8ify by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 spike protein in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2023-02-20
Release date:2023-08-30
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
7X3C
DownloadVisualize
BU of 7x3c by Molmil
Cryo-EM structure of Coxsackievirus B1 muture virion in complex with nAbs 8A10 and 5F5 (CVB1-M:8A10:5F5)
Descriptor: 5F5 heavy chain, 5F5 light chain, 8A10 heavy chain, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X38
DownloadVisualize
BU of 7x38 by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 8A10 (CVB1-E:8A10)
Descriptor: 8A10 heavy chain, 8A10 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X42
DownloadVisualize
BU of 7x42 by Molmil
Cryo-EM structure of Coxsackievirus B1 pre-A-particle in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP0, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-01
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
8IL0
DownloadVisualize
BU of 8il0 by Molmil
Crystal structure of LmbT from Streptomyces lincolnensis NRRL ISP-5355
Descriptor: Glycosyltransferase
Authors:Dai, Y, Li, P, Qiao, H, Xia, M, Liu, W, Fang, P.
Deposit date:2023-03-01
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural Basis of Low-Molecular-Weight Thiol Glycosylation in Lincomycin A Biosynthesis.
Acs Chem.Biol., 18, 2023
8ILA
DownloadVisualize
BU of 8ila by Molmil
Crystal structure of LmbT from Streptomyces lincolnensis NRRL ISP-5355 in complex with substrates
Descriptor: (2~{S})-3-[2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-[(1~{R},2~{R})-1-azanyl-2-oxidanyl-propyl]-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-1~{H}-imidazol-5-yl]-2-(trimethyl-$l^{4}-azanyl)propanoic acid, GUANOSINE-5'-DIPHOSPHATE, Glycosyltransferase
Authors:Dai, Y, Qiao, H, Xia, M, Fang, P, Liu, W.
Deposit date:2023-03-03
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural Basis of Low-Molecular-Weight Thiol Glycosylation in Lincomycin A Biosynthesis.
Acs Chem.Biol., 18, 2023
7WRH
DownloadVisualize
BU of 7wrh by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Han, P, Xie, Y, Qi, J.
Deposit date:2022-01-26
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Broader-species receptor binding and structural bases of Omicron SARS-CoV-2 to both mouse and palm-civet ACE2s.
Cell Discov, 8, 2022
8IM7
DownloadVisualize
BU of 8im7 by Molmil
Human gamma-secretase treated with ganglioside GM1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhou, R, Yang, G, Shi, Y.
Deposit date:2023-03-06
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Preferential Regulation of Gamma-Secretase-Mediated Cleavage of APP by Ganglioside GM1 Reveals a Potential Therapeutic Target for Alzheimer's Disease.
Adv Sci, 10, 2023
8IT9
DownloadVisualize
BU of 8it9 by Molmil
Co-crystal structure of FTO bound to 22
Descriptor: 2-OXOGLUTARIC ACID, 2-[(2,6-diethyl-4-pyridin-4-yl-phenyl)amino]-6-(1,4-oxazepan-4-ylmethyl)benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO
Authors:Yang, C.-G, Gan, J.H.
Deposit date:2023-03-22
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Rational Design of RNA Demethylase FTO Inhibitors with Enhanced Antileukemia Drug-Like Properties.
J.Med.Chem., 66, 2023
3VOD
DownloadVisualize
BU of 3vod by Molmil
Crystal Structure of mutant MarR C80S from E.coli
Descriptor: Multiple antibiotic resistance protein marR
Authors:Lou, H, Zhu, R, Hao, Z.
Deposit date:2012-01-21
Release date:2013-03-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014
3WD5
DownloadVisualize
BU of 3wd5 by Molmil
Crystal structure of TNFalpha in complex with Adalimumab Fab fragment
Descriptor: Adalimumab Heavy Chain, Adalimumab Light Chain, Tumor necrosis factor
Authors:Hu, S, Liang, S.Y, Guo, Y.J, Lou, Z.Y.
Deposit date:2013-06-06
Release date:2013-08-14
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Comparison of the inhibition mechanisms of adalimumab and infliximab in treating tumor necrosis factor alpha-associated diseases from a molecular view
J.Biol.Chem., 288, 2013
7F6L
DownloadVisualize
BU of 7f6l by Molmil
Crystal structure of human MUS81-EME2 complex
Descriptor: Crossover junction endonuclease MUS81, Probable crossover junction endonuclease EME2
Authors:Hua, Z.K, Zhang, D.P, Yuan, C, Lin, Z.H.
Deposit date:2021-06-25
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the human MUS81-EME2 complex.
Structure, 30, 2022
5XN3
DownloadVisualize
BU of 5xn3 by Molmil
Crystal structure of SPSB2 in complex with a rational designed RGD containing cyclic peptide inhibitor of SPSB2-iNOS interaction
Descriptor: SPRY domain-containing SOCS box protein 2, cR8 peptide from NOS2
Authors:You, T, Kuang, Z.
Deposit date:2017-05-17
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of SPSB2 in complex with a rational designed RGD-containing cyclic peptide inhibitor of SPSB2-iNOS interaction.
Biochem. Biophys. Res. Commun., 489, 2017
1ZGK
DownloadVisualize
BU of 1zgk by Molmil
1.35 angstrom structure of the Kelch domain of Keap1
Descriptor: Kelch-like ECH-associated protein 1
Authors:Li, X, Bottoms, C.A, Hannink, M, Beamer, L.J.
Deposit date:2005-04-21
Release date:2005-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Conserved solvent and side-chain interactions in the 1.35 Angstrom structure of the Kelch domain of Keap1.
Acta Crystallogr.,Sect.D, 61, 2005
5YZ9
DownloadVisualize
BU of 5yz9 by Molmil
zinc finger domain of METTL3-METTL14 N6-methyladenosine methyltransferase
Descriptor: N6-adenosine-methyltransferase catalytic subunit, ZINC ION
Authors:Dong, X, Tang, C, Gong, Z, Yin, P, Huang, J.B.
Deposit date:2017-12-13
Release date:2018-03-28
Last modified:2019-03-27
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of the RNA recognition domain of METTL3-METTL14 N6-methyladenosine methyltransferase.
Protein Cell, 10, 2019
4G3Y
DownloadVisualize
BU of 4g3y by Molmil
Crystal structure of TNF-alpha in complex with Infliximab Fab fragment
Descriptor: Tumor necrosis factor, infliximab Fab H, infliximab Fab L
Authors:Liang, S.Y, Dai, J.X, Guo, Y.J, Lou, Z.Y.
Deposit date:2012-07-15
Release date:2013-03-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for treating tumor necrosis factor alpha (TNFalpha)-associated diseases with the therapeutic antibody infliximab
J.Biol.Chem., 288, 2013
4JBA
DownloadVisualize
BU of 4jba by Molmil
Crystal Structure of the Oxidized Form of MarR from E.coli
Descriptor: Multiple antibiotic resistance protein MarR
Authors:Lou, H, Zhu, R, Hao, Z.
Deposit date:2013-02-19
Release date:2013-10-16
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon