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8K5P
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BU of 8k5p by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 2 (Pol II Rat1-PTTC2)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-07-23
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
8JCH
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BU of 8jch by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-05-11
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
8JRC
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BU of 8jrc by Molmil
Crystal structure of the GAF domain of the transcriptional activator NifA
Descriptor: Nif-specific regulatory protein
Authors:Zeng, Y, Guo, L, Li, D.F.
Deposit date:2023-06-16
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the GAF domain of the transcriptional activator NifA
To Be Published
6KD0
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BU of 6kd0 by Molmil
Crystal Structure of Vibralactone Cyclase
Descriptor: Vibralactone Cyclase
Authors:Zeng, Y, Feng, K.N.
Deposit date:2019-06-30
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Hydrolase-Catalyzed Cyclization Forms the Fused Bicyclic beta-Lactone in Vibralactone.
Angew.Chem.Int.Ed.Engl., 59, 2020
6IYX
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BU of 6iyx by Molmil
Crystal Structure Analysis of a Eukaryotic Membrane Protein
Descriptor: BROMIDE ION, CALCIUM ION, Trimeric intracellular cation channel type A
Authors:Zeng, Y, Wang, X.H, Gao, F, Su, M, Chen, Y.H.
Deposit date:2018-12-17
Release date:2019-05-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IZ3
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BU of 6iz3 by Molmil
Structural basis for activity of TRIC counter-ion channels in calcium release
Descriptor: Trimeric intracellular cation channel type B-B
Authors:Zeng, Y, Wang, X.H, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.791 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
5D0Q
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BU of 5d0q by Molmil
BamACDE complex, outer membrane beta-barrel assembly machinery (BAM) complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, Outer membrane protein assembly factor BamD, ...
Authors:Gu, Y, Paterson, N, Zeng, Y, Dong, H, Wang, W, Dong, C.
Deposit date:2015-08-03
Release date:2016-03-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of outer membrane protein insertion by the BAM complex.
Nature, 531, 2016
5D0O
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BU of 5d0o by Molmil
BamABCDE complex, outer membrane beta barrel assembly machinery entire complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Gu, Y, Paterson, N, Zeng, Y, Dong, H, Wang, W, Dong, C.
Deposit date:2015-08-03
Release date:2016-03-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of outer membrane protein insertion by the BAM complex.
Nature, 531, 2016
3JD6
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BU of 3jd6 by Molmil
Double octamer structure of retinoschisin, a cell-cell adhesion protein of the retina
Descriptor: Retinoschisin
Authors:Tolun, G, Vijayasarathy, C, Huang, R, Zeng, Y, Li, Y, Steven, A.C, Sieving, P.A, Heymann, J.B.
Deposit date:2016-04-12
Release date:2016-05-11
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Paired octamer rings of retinoschisin suggest a junctional model for cell-cell adhesion in the retina.
Proc.Natl.Acad.Sci.USA, 113, 2016
5WUF
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BU of 5wuf by Molmil
Structural basis for conductance through TRIC cation channels
Descriptor: CADMIUM ION, Putative membrane protein
Authors:Mao, Y, Gao, F, Su, M, Wang, X.H, Zeng, Y, Bruni, R, Kloss, B, Hendrickson, W.A, Chen, Y.H, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2016-12-17
Release date:2017-08-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structural basis for conductance through TRIC cation channels.
Nat Commun, 8, 2017
6IZF
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BU of 6izf by Molmil
Structural basis for activity of TRIC counter-ion channels in calcium release
Descriptor: (2R)-1-(dodecanoyloxy)-3-hydroxypropan-2-yl (5E,8E,11E)-tetradeca-5,8,11-trienoate, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, X.H, Zeng, Y, Su, M, Hendrickson, W.A, Chen, Y.H.
Deposit date:2018-12-19
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IYZ
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BU of 6iyz by Molmil
Structural basis for activity of TRIC counter-ion channels in calcium release
Descriptor: CHLORIDE ION, Trimeric intracellular cation channel type A
Authors:Wang, X.H, Zeng, Y, Qin, L, Gao, F, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IZ4
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BU of 6iz4 by Molmil
Crystal Structure Analysis of TRIC counter-ion channels in calcium release
Descriptor: Trimeric intracellular cation channel type B-B
Authors:Wang, X.H, Zeng, Y, Gao, F, Su, M, Hendrickson, W.A, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IYU
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BU of 6iyu by Molmil
Crystal Structure Analysis of an Eukaryotic Membrane Protein
Descriptor: CALCIUM ION, CHLORIDE ION, Trimeric intracellular cation channel type A
Authors:Wang, X.H, Zeng, Y, Su, M, Gao, F, Chen, Y.H.
Deposit date:2018-12-17
Release date:2019-05-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IZ1
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BU of 6iz1 by Molmil
Crystal Structure Analysis of a Eukaryotic Membrane Protein
Descriptor: CALCIUM ION, CHLORIDE ION, Trimeric intracellular cation channel type A
Authors:Wang, X.H, Zeng, Y, Gao, F, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IZ0
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BU of 6iz0 by Molmil
Crystal Structure Analysis of a Eukaryotic Membrane Protein
Descriptor: CALCIUM ION, CHLORIDE ION, Trimeric intracellular cation channel type A
Authors:Wang, X.H, Zeng, Y, Gao, F, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
7UJJ
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BU of 7ujj by Molmil
Stx2a and DARPin complex
Descriptor: 1,2-ETHANEDIOL, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DARPin, ...
Authors:Jiang, M, Zhang, J.
Deposit date:2022-03-30
Release date:2023-04-12
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:A Multi-Specific DARPin Potently Neutralizes Shiga Toxin 2 via Simultaneous Modulation of Both Toxin Subunits.
Bioengineering (Basel), 9, 2022
3CIV
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BU of 3civ by Molmil
Crystal structure of the endo-beta-1,4-mannanase from Alicyclobacillus acidocaldarius
Descriptor: Endo-beta-1,4-mannanase
Authors:Ma, Y, Zhang, Y, Xue, Y.
Deposit date:2008-03-12
Release date:2008-08-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Characterization of the Intracellular Mannanase AaManA of Alicyclobacillus acidocaldarius Reveals a Novel Glycoside Hydrolase Family Belonging to Clan GH-A
J.Biol.Chem., 283, 2008
4TJV
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BU of 4tjv by Molmil
Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1
Descriptor: IODIDE ION, Vacuolar-sorting receptor 1
Authors:Luo, F, Fong, Y.H, Jiang, L.W, Wong, K.B.
Deposit date:2014-05-25
Release date:2014-12-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:How vacuolar sorting receptor proteins interact with their cargo proteins: crystal structures of apo and cargo-bound forms of the protease-associated domain from an Arabidopsis vacuolar sorting receptor.
Plant Cell, 26, 2014
6WQ1
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BU of 6wq1 by Molmil
Eukaryotic LanCL2 protein
Descriptor: LanC-like protein 2, ZINC ION
Authors:Nair, S.K, Garg, N.
Deposit date:2020-04-28
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome.
Cell, 184, 2021
2QDX
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BU of 2qdx by Molmil
P.Aeruginosa Fpr with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin reductase, SULFATE ION
Authors:Han, H, Schonbrunn, E.
Deposit date:2007-06-21
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biochemical and Structural Characterization of Pseudomonas aeruginosa Bfd and FPR: Ferredoxin NADP(+) Reductase and Not Ferredoxin Is the Redox Partner of Heme Oxygenase under Iron-Starvation Conditions
Biochemistry, 46, 2007
7YJ0
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BU of 7yj0 by Molmil
Structural basis of oxepinone formation by a flavin-monooxygenase VibO
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, VibO
Authors:Zhang, M.F, Pan, L.F.
Deposit date:2022-07-18
Release date:2023-05-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A flavin-monooxygenase catalyzing oxepinone formation and the complete biosynthesis of vibralactone.
Nat Commun, 14, 2023
8KCB
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BU of 8kcb by Molmil
Complex of DDM1-nucleosome(H2A) complex with DDM1 bound to SHL2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Zhang, H, Zhang, Y.
Deposit date:2023-08-07
Release date:2024-06-26
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Mechanism of heterochromatin remodeling revealed by the DDM1 bound nucleosome structures.
Structure, 32, 2024
8KCC
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BU of 8kcc by Molmil
Complex of DDM1-nucleosome(H2A.W) complex with DDM1 bound to SHL2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Zhang, H, Zhang, Y.
Deposit date:2023-08-07
Release date:2024-06-26
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of heterochromatin remodeling revealed by the DDM1 bound nucleosome structures.
Structure, 32, 2024
5OR1
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BU of 5or1 by Molmil
BamA structure of Salmonella enterica
Descriptor: Outer membrane protein assembly factor BamA
Authors:Dong, C, Gu, Y.
Deposit date:2017-08-14
Release date:2018-02-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:BamA beta 16C strand and periplasmic turns are critical for outer membrane protein insertion and assembly.
Biochem. J., 474, 2017

 

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