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3C1S
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BU of 3c1s by Molmil
Crystal structure of GRX1 in glutathionylated form
Descriptor: GLUTATHIONE, Glutaredoxin-1
Authors:Yu, J, Zhou, C.Z.
Deposit date:2008-01-24
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Glutathionylation-triggered conformational changes of glutaredoxin Grx1 from the yeast Saccharomyces cerevisiae.
Proteins, 72, 2008
6W25
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BU of 6w25 by Molmil
Crystal structure of the Melanocortin-4 Receptor (MC4R) in complex with SHU9119
Descriptor: CALCIUM ION, Melanocortin receptor 4,GlgA glycogen synthase,Melanocortin receptor 4, OLEIC ACID, ...
Authors:Yu, J, Gimenez, L.E, Hernandez, C.C, Wu, Y, Wein, A.H, Han, G.W, McClary, K, Mittal, S.R, Burdsall, K, Stauch, B, Wu, L, Stevens, S.N, Peisley, A, Williams, S.Y, Chen, V, Millhauser, G.L, Zhao, S, Cone, R.D, Stevens, R.C.
Deposit date:2020-03-04
Release date:2020-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Determination of the melanocortin-4 receptor structure identifies Ca2+as a cofactor for ligand binding.
Science, 368, 2020
3C1R
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BU of 3c1r by Molmil
Crystal structure of oxidized GRX1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glutaredoxin-1
Authors:Yu, J, Zhou, C.Z.
Deposit date:2008-01-24
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glutathionylation-triggered conformational changes of glutaredoxin Grx1 from the yeast Saccharomyces cerevisiae.
Proteins, 72, 2008
8QOT
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BU of 8qot by Molmil
Structure of the mu opioid receptor bound to the antagonist nanobody NbE
Descriptor: Anti-Fab Nanobody, Mu-type opioid receptor, NabFab HC, ...
Authors:Yu, J, Kumar, A, Zhang, X, Martin, C, Raia, P, Manglik, A, Ballet, S, Boland, A, Stoeber, M.
Deposit date:2023-09-29
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural Basis of mu-Opioid Receptor-Targeting by a Nanobody Antagonist.
Biorxiv, 2023
2QJL
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BU of 2qjl by Molmil
Crystal structure of Urm1
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Ubiquitin-related modifier 1
Authors:Yu, J, Zhou, C.Z.
Deposit date:2007-07-07
Release date:2007-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of the dimeric Urm1 from the yeast Saccharomyces cerevisiae.
Proteins, 71, 2008
7LDE
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BU of 7lde by Molmil
native AMPA receptor
Descriptor: 11B8 scFv, 15F1 Fab heavy chain, 15F1 Fab light chain, ...
Authors:Yu, J, Rao, P, Gouaux, E.
Deposit date:2021-01-13
Release date:2021-05-12
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition.
Nature, 594, 2021
7LEP
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BU of 7lep by Molmil
The composite LBD-TMD structure combined from all hippocampal AMPAR subtypes at 3.25 Angstrom resolution
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol, DECANE, ...
Authors:Yu, J, Rao, P, Gouaux, E.
Deposit date:2021-01-14
Release date:2021-05-12
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition.
Nature, 594, 2021
7LDD
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BU of 7ldd by Molmil
native AMPA receptor
Descriptor: 11B8 scFv, 15F1 Fab heavy chain, 15F1 Fab light chain, ...
Authors:Yu, J, Rao, P, Gouaux, E.
Deposit date:2021-01-13
Release date:2021-05-12
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition.
Nature, 594, 2021
3W7A
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BU of 3w7a by Molmil
Crystal Structure of azoreductase AzrC fin complex with sulfone-modified azo dye Acid Red 88
Descriptor: 4-[(E)-(2-hydroxynaphthalen-1-yl)diazenyl]naphthalene-1-sulfonic acid, CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Yu, J, Ogata, D, Ooi, T, Yao, M.
Deposit date:2013-02-27
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
3W78
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BU of 3w78 by Molmil
Crystal Structure of azoreductase AzrC in complex with NAD(P)-inhibitor Cibacron Blue
Descriptor: CIBACRON BLUE, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
Authors:Yu, J, Ogata, D, Ooi, T, Yao, M.
Deposit date:2013-02-27
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
2HQM
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BU of 2hqm by Molmil
Crystal Structure of Glutathione Reductase Glr1 from the Yeast Saccharomyces cerevisiae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, ...
Authors:Yu, J, Zhou, C.Z.
Deposit date:2006-07-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of glutathione reductase Glr1 from the yeast Saccharomyces cerevisiae.
Proteins, 68, 2007
5ZT0
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BU of 5zt0 by Molmil
Crystal Structure of Protein Phosphate 1 Complexed with PP1 binding domain of GL
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Protein phosphatase 1 regulatory subunit 3B, ...
Authors:Yu, J, Xiang, S.
Deposit date:2018-05-01
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3204267 Å)
Cite:Structural basis for protein phosphatase 1 recruitment by glycogen-targeting subunits
FEBS J., 285, 2018
5ZQV
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BU of 5zqv by Molmil
Crystal Structure of Protein Phosphate 1 complexed with PP1 binding domain of GM
Descriptor: CITRATE ANION, MANGANESE (II) ION, Protein phosphatase 1 regulatory subunit 3A, ...
Authors:Yu, J, Xiang, S.
Deposit date:2018-04-20
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for protein phosphatase 1 recruitment by glycogen-targeting subunits.
FEBS J., 285, 2018
7YGG
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BU of 7ygg by Molmil
Crystal structure of human CD47 in complex with engineered SIRPa.D1(N80A)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Leukocyte surface antigen CD47, ...
Authors:Yu, J, Tian, W.
Deposit date:2022-07-11
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal Structure of Human CD47 in Complex with Engineered SIRP alpha.D1(N80A).
Molecules, 27, 2022
4EGX
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BU of 4egx by Molmil
Crystal structure of KIF1A CC1-FHA tandem
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Kinesin-like protein KIF1A
Authors:Yu, J, Huo, L, Yue, Y, Xu, T, Zhang, M, Feng, W.
Deposit date:2012-04-02
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:The CC1-FHA Tandem as a Central Hub for Controlling the Dimerization and Activation of Kinesin-3 KIF1A
Structure, 20, 2012
3SHU
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BU of 3shu by Molmil
Crystal structure of ZO-1 PDZ3
Descriptor: Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
3SHW
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BU of 3shw by Molmil
Crystal structure of ZO-1 PDZ3-SH3-Guk supramodule complex with Connexin-45 peptide
Descriptor: Gap junction gamma-1 protein, Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
4YMX
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BU of 4ymx by Molmil
Crystal structure of the substrate binding protein of an amino acid ABC transporter
Descriptor: ABC-type amino acid transport system, periplasmic component, ARGININE
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4YMV
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BU of 4ymv by Molmil
Crystal structure of an amino acid ABC transporter with ATPs
Descriptor: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4YMS
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BU of 4yms by Molmil
Crystal structure of an amino acid ABC transporter
Descriptor: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4YMU
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BU of 4ymu by Molmil
Crystal structure of an amino acid ABC transporter complex with arginines and ATPs
Descriptor: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4YMW
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BU of 4ymw by Molmil
Crystal structure of an amino acid ABC transporter with histidines
Descriptor: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
4YMT
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BU of 4ymt by Molmil
Crystal structure of an amino acid ABC transporter complex with arginines
Descriptor: ABC-type amino acid transport system, permease component, ABC-type polar amino acid transport system, ...
Authors:Ge, J, Yu, J, Yang, M.
Deposit date:2015-03-07
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Structural basis for substrate specificity of an amino acid ABC transporter
Proc.Natl.Acad.Sci.USA, 112, 2015
3TFM
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BU of 3tfm by Molmil
Myosin X PH1N-PH2-PH1C tandem
Descriptor: Myosin X, PHOSPHATE ION
Authors:Yu, J, Lu, Q, Yan, J, Wei, Z, Zhang, M.
Deposit date:2011-08-16
Release date:2011-12-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural basis of the myosin X PH1N-PH2-PH1C tandem as a specific and acute cellular PI(3,4,5)P3 sensor
MOLECULAR BIOLOGY OF THE CELL, 22, 2011
3HPM
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BU of 3hpm by Molmil
Oxidized dimeric PICK1 PDZ C46G mutant in complex with the carboxyl tail peptide of GluR2
Descriptor: PRKCA-binding protein,9-mer peptide of THE GLUR2 SUBUNIT
Authors:Yu, J, Shi, Y, Zhang, M.
Deposit date:2009-06-04
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Redox-Regulated Lipid Membrane Binding of the PICK1 PDZ Domain.
Biochemistry, 49, 2010

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