Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3UBB
DownloadVisualize
BU of 3ubb by Molmil
The crystal structure of GlpG in complex with a phosphonofluoridate inhibitor
Descriptor: Rhomboid protease glpG, propan-2-yl hydrogen (S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}ethyl]phosphonate
Authors:Xue, Y, Ha, Y.
Deposit date:2011-10-24
Release date:2012-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Conformational Change in Rhomboid Protease GlpG Induced by Inhibitor Binding to Its S' Subsites.
Biochemistry, 51, 2012
1FRP
DownloadVisualize
BU of 1frp by Molmil
CRYSTAL STRUCTURE OF FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH FRUCTOSE-2,6-BISPHOSPHATE, AMP AND ZN2+ AT 2.0 ANGSTROMS RESOLUTION. ASPECTS OF SYNERGISM BETWEEN INHIBITORS
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, FRUCTOSE 1,6-BISPHOSPHATASE, ...
Authors:Xue, Y, Huang, S, Liang, J.-Y, Zhang, Y, Lipscomb, W.N.
Deposit date:1994-08-26
Release date:1994-11-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of fructose-1,6-bisphosphatase complexed with fructose 2,6-bisphosphate, AMP, and Zn2+ at 2.0-A resolution: aspects of synergism between inhibitors.
Proc.Natl.Acad.Sci.USA, 91, 1994
1CSM
DownloadVisualize
BU of 1csm by Molmil
THE CRYSTAL STRUCTURE OF ALLOSTERIC CHORISMATE MUTASE AT 2.2 ANGSTROMS RESOLUTION
Descriptor: CHORISMATE MUTASE, TRYPTOPHAN
Authors:Xue, Y, Lipscomb, W.N.
Deposit date:1994-08-22
Release date:1995-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of allosteric chorismate mutase at 2.2-A resolution.
Proc.Natl.Acad.Sci.USA, 91, 1994
2VB2
DownloadVisualize
BU of 2vb2 by Molmil
Crystal structure of Cu(I)CusF
Descriptor: CATION EFFLUX SYSTEM PROTEIN CUSF, COPPER (II) ION, SULFATE ION
Authors:Xue, Y, Davis, A.V, Balakrishnan, G, Stasser, J.P, Staehlin, B.M, Focia, P, Spiro, T.G, Penner-Hahn, J.E, O'Halloran, T.V.
Deposit date:2007-09-06
Release date:2007-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf.
Nat.Chem.Biol., 4, 2008
2VB3
DownloadVisualize
BU of 2vb3 by Molmil
Crystal structure of Ag(I)CusF
Descriptor: CATION EFFLUX SYSTEM PROTEIN CUSF, SILVER ION
Authors:Xue, Y, Davis, A.V, Balakrishnan, G, Stasser, J.P, Staehlin, B.M, Focia, P, Spiro, T.G, Penner-Hahn, J.E, O'Halloran, T.V.
Deposit date:2007-09-06
Release date:2007-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf.
Nat.Chem.Biol., 4, 2008
4H1D
DownloadVisualize
BU of 4h1d by Molmil
Cocrystal structure of GlpG and DFP
Descriptor: DIISOPROPYL PHOSPHONATE, Rhomboid protease GlpG
Authors:Xue, Y, Ha, Y.
Deposit date:2012-09-10
Release date:2013-05-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.8975 Å)
Cite:Large lateral movement of transmembrane helix s5 is not required for substrate access to the active site of rhomboid intramembrane protease.
J.Biol.Chem., 288, 2013
3Q7G
DownloadVisualize
BU of 3q7g by Molmil
Crystal Structure of E2 domain of Human Amyloid Precursor-Like Protein 1 in complex with SOS (sucrose octasulfate)
Descriptor: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, Amyloid-like protein 1
Authors:Xue, Y, Ha, Y.
Deposit date:2011-01-04
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the E2 Domain of Amyloid Precursor Protein-like Protein 1 in Complex with Sucrose Octasulfate.
J.Biol.Chem., 286, 2011
3TXT
DownloadVisualize
BU of 3txt by Molmil
Crystal structure of GlpG in complex with inhibitor DFP
Descriptor: DIISOPROPYL PHOSPHONATE, Rhomboid protease glpG
Authors:Xue, Y, Ha, Y.
Deposit date:2011-09-23
Release date:2011-12-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of rhomboid protease GlpG in complex with a mechanism-based inhibitor
To be Published
3Q7L
DownloadVisualize
BU of 3q7l by Molmil
Crystal structure of the E2 domain of amyloid precursor-like protein 1
Descriptor: Amyloid-like protein 1, SULFATE ION
Authors:Xue, Y, Ha, Y.
Deposit date:2011-01-05
Release date:2011-06-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the E2 Domain of Amyloid Precursor Protein-like Protein 1 in Complex with Sucrose Octasulfate.
J.Biol.Chem., 286, 2011
3QMK
DownloadVisualize
BU of 3qmk by Molmil
Crystal structure of the E2 domain of APLP1 in complex with heparin hexasaccharide
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Amyloid-like protein 1, SULFATE ION
Authors:Xue, Y, Ha, Y.
Deposit date:2011-02-04
Release date:2011-10-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of amyloid precursor-like protein 1 and heparin complex suggests a dual role of heparin in E2 dimerization.
Proc.Natl.Acad.Sci.USA, 108, 2011
1A7C
DownloadVisualize
BU of 1a7c by Molmil
HUMAN PLASMINOGEN ACTIVATOR INHIBITOR TYPE-1 IN COMPLEX WITH A PENTAPEPTIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-ribopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PENTAPEPTIDE, ...
Authors:Xue, Y, Inghardt, T, Sjolin, L, Deinum, J.
Deposit date:1998-03-12
Release date:1999-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Interfering with the inhibitory mechanism of serpins: crystal structure of a complex formed between cleaved plasminogen activator inhibitor type 1 and a reactive-centre loop peptide
Structure, 6, 1998
1AG6
DownloadVisualize
BU of 1ag6 by Molmil
PLASTOCYANIN FROM SPINACH
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Xue, Y, Okvist, M, Young, S.
Deposit date:1997-04-02
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of spinach plastocyanin at 1.7 A resolution.
Protein Sci., 7, 1998
1BIC
DownloadVisualize
BU of 1bic by Molmil
CRYSTALLOGRAPHIC ANALYSIS OF THR-200-> HIS HUMAN CARBONIC ANHYDRASE II AND ITS COMPLEX WITH THE SUBSTRATE, HCO3-
Descriptor: BICARBONATE ION, CARBONIC ANHYDRASE II, METHYL MERCURY ION, ...
Authors:Xue, Y, Vidgren, J, Svensson, L.A, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-01
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic analysis of Thr-200-->His human carbonic anhydrase II and its complex with the substrate, HCO3-.
Proteins, 15, 1993
1CAK
DownloadVisualize
BU of 1cak by Molmil
STRUCTURAL ANALYSIS OF THE ZINC HYDROXIDE-THR 199-GLU 106 HYDROGEN BONDING NETWORK IN HUMAN CARBONIC ANHYDRASE II
Descriptor: CARBONIC ANHYDRASE II, SULFATE ION, ZINC ION
Authors:Xue, Y, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the zinc hydroxide-Thr-199-Glu-106 hydrogen-bond network in human carbonic anhydrase II.
Proteins, 17, 1993
1CAJ
DownloadVisualize
BU of 1caj by Molmil
STRUCTURAL ANALYSIS OF THE ZINC HYDROXIDE-THR 199-GLU 106 HYDROGEN BONDING NETWORK IN HUMAN CARBONIC ANHYDRASE II
Descriptor: CARBONIC ANHYDRASE II, SULFATE ION, ZINC ION
Authors:Xue, Y, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the zinc hydroxide-Thr-199-Glu-106 hydrogen-bond network in human carbonic anhydrase II.
Proteins, 17, 1993
1CAM
DownloadVisualize
BU of 1cam by Molmil
STRUCTURAL ANALYSIS OF THE ZINC HYDROXIDE-THR 199-GLU 106 HYDROGEN BONDING NETWORK IN HUMAN CARBONIC ANHYDRASE II
Descriptor: BICARBONATE ION, CARBONIC ANHYDRASE II, ZINC ION
Authors:Xue, Y, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the zinc hydroxide-Thr-199-Glu-106 hydrogen-bond network in human carbonic anhydrase II.
Proteins, 17, 1993
1CAL
DownloadVisualize
BU of 1cal by Molmil
STRUCTURAL ANALYSIS OF THE ZINC HYDROXIDE-THR 199-GLU 106 HYDROGEN BONDING NETWORK IN HUMAN CARBONIC ANHYDRASE II
Descriptor: CARBONIC ANHYDRASE II, ZINC ION
Authors:Xue, Y, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of the zinc hydroxide-Thr-199-Glu-106 hydrogen-bond network in human carbonic anhydrase II.
Proteins, 17, 1993
1CAI
DownloadVisualize
BU of 1cai by Molmil
STRUCTURAL ANALYSIS OF THE ZINC HYDROXIDE-THR 199-GLU 106 HYDROGEN BONDING NETWORK IN HUMAN CARBONIC ANHYDRASE II
Descriptor: CARBONIC ANHYDRASE II, SULFATE ION, ZINC ION
Authors:Xue, Y, Liljas, A, Jonsson, B.-H, Lindskog, S.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the zinc hydroxide-Thr-199-Glu-106 hydrogen-bond network in human carbonic anhydrase II.
Proteins, 17, 1993
4BTM
DownloadVisualize
BU of 4btm by Molmil
TTBK1 in complex with inhibitor
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, SULFATE ION, ...
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
4BTK
DownloadVisualize
BU of 4btk by Molmil
TTBK1 in complex with inhibitor
Descriptor: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, DIMETHYL SULFOXIDE, TAU-TUBULIN KINASE 1
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
4BTJ
DownloadVisualize
BU of 4btj by Molmil
TTBK1 in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ...
Authors:Xue, Y, Wan, P, Hillertz, P, Schweikart, F, Zhao, Y, Wissler, L, Dekker, N.
Deposit date:2013-06-18
Release date:2013-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:X-Ray Structural Analysis of Tau-Tubulin Kinase 1 and its Interactions with Small Molecular Inhibitors.
Chemmedchem, 8, 2013
2O9I
DownloadVisualize
BU of 2o9i by Molmil
Crystal Structure of the Human Pregnane X Receptor LBD in complex with an SRC-1 coactivator peptide and T0901317
Descriptor: N-(2,2,2-TRIFLUOROETHYL)-N-{4-[2,2,2-TRIFLUORO-1-HYDROXY-1-(TRIFLUOROMETHYL)ETHYL]PHENYL}BENZENESULFONAMIDE, Nuclear Receptor Coactivator 1 isoform 3, Orphan nuclear receptor PXR
Authors:Xue, Y, Redinbo, M.R.
Deposit date:2006-12-13
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the PXR-T1317 complex provides a scaffold to examine the potential for receptor antagonism.
Bioorg.Med.Chem., 15, 2007
2AFR
DownloadVisualize
BU of 2afr by Molmil
The Crystal Structure of Putative Precorrin Isomerase CbiC in Cobalamin Biosynthesis
Descriptor: cobalamin biosynthesis precorrin isomerase
Authors:Xue, Y, Wei, Z, Li, X.
Deposit date:2005-07-26
Release date:2006-04-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of putative precorrin isomerase CbiC in cobalamin biosynthesis
J.Struct.Biol., 153, 2006
2AFV
DownloadVisualize
BU of 2afv by Molmil
The Crystal Structure of Putative Precorrin Isomerase CbiC in Cobalamin Biosynthesis
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
Authors:Xue, Y, Wei, Z.
Deposit date:2005-07-26
Release date:2006-04-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of putative precorrin isomerase CbiC in cobalamin biosynthesis
J.Struct.Biol., 153, 2006
5FP0
DownloadVisualize
BU of 5fp0 by Molmil
ligand complex structure of soluble epoxide hydrolase
Descriptor: BIFUNCTIONAL EPOXIDE HYDROLASE 2, DIMETHYL SULFOXIDE, N-cyclopentyl-2-[4-(trifluoromethyl)phenyl]-3H-benzimidazole-4-sulfonamide
Authors:Xue, Y, Olsson, T, Johansson, C.A, Oster, L, Beisel, H.G, Rohman, M, Karis, D, Backstrom, S.
Deposit date:2015-11-26
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Fragment Screening of Soluble Epoxide Hydrolase for Lead Generation-Structure-Based Hit Evaluation and Chemistry Exploration.
Chemmedchem, 11, 2016

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon