4G3K
| Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state | 分子名称: | Transcriptional regulator nlh1 | 著者 | Wemmer, D.E, Batchelor, J.D, Wang, A, Lee, P, Doucleff, M. | 登録日 | 2012-07-14 | 公開日 | 2013-05-29 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (3.05 Å) | 主引用文献 | Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus J.Mol.Biol., 425, 2013
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1LLS
| CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON | 分子名称: | Maltose-binding periplasmic protein, XENON | 著者 | Rubin, S.M, Lee, S.-Y, Ruiz, E.J, Pines, A, Wemmer, D.E. | 登録日 | 2002-04-30 | 公開日 | 2002-09-18 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | DETECTION AND CHARACTERIZATION OF XENON-BINDING SITES IN PROTEINS BY 129XE NMR SPECTROSCOPY J.MOL.BIOL., 322, 2002
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1BBI
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3HSF
| HEAT SHOCK TRANSCRIPTION FACTOR (HSF) | 分子名称: | HEAT SHOCK TRANSCRIPTION FACTOR | 著者 | Damberger, F.F, Pelton, J.G, Liu, C, Cho, H, Harrison, C.J, Nelson, H.C.M, Wemmer, D.E. | 登録日 | 1995-08-07 | 公開日 | 1995-11-14 | 最終更新日 | 2022-03-16 | 実験手法 | SOLUTION NMR | 主引用文献 | Refined solution structure and dynamics of the DNA-binding domain of the heat shock factor from Kluyveromyces lactis. J.Mol.Biol., 254, 1995
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108D
| THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY | 分子名称: | 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | 著者 | Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P. | 登録日 | 1995-01-31 | 公開日 | 1995-06-03 | 最終更新日 | 2024-03-13 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy. Biochemistry, 34, 1995
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1L7O
| CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE IN APO FORM | 分子名称: | ACETIC ACID, PHOSPHOSERINE PHOSPHATASE, ZINC ION | 著者 | Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC) | 登録日 | 2002-03-16 | 公開日 | 2002-06-19 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states. J.Mol.Biol., 319, 2002
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2M20
| EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure. | 分子名称: | Epidermal growth factor receptor | 著者 | Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J. | 登録日 | 2012-12-11 | 公開日 | 2013-02-20 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor. Cell(Cambridge,Mass.), 152, 2013
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3GT8
| Crystal structure of the inactive EGFR kinase domain in complex with AMP-PNP | 分子名称: | Epidermal growth factor receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | 著者 | Jura, N, Endres, N.F, Engel, K, Deindl, S, Das, R, Lamers, M.H, Wemmer, D.E, Zhang, X, Kuriyan, J. | 登録日 | 2009-03-27 | 公開日 | 2009-07-21 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.955 Å) | 主引用文献 | Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment. Cell(Cambridge,Mass.), 137, 2009
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3E7L
| Crystal structure of sigma54 activator NtrC4's DNA binding domain | 分子名称: | Transcriptional regulator (NtrC family), ZINC ION | 著者 | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | 登録日 | 2008-08-18 | 公開日 | 2008-11-25 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.252 Å) | 主引用文献 | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation. J.Mol.Biol., 384, 2008
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3DZD
| Crystal structure of sigma54 activator NTRC4 in the inactive state | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family) | 著者 | Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E. | 登録日 | 2008-07-29 | 公開日 | 2008-11-25 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation. J.Mol.Biol., 384, 2008
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4G3W
| Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state | 分子名称: | Transcriptional regulator nlh1 | 著者 | Batchelor, J.D, Wang, A, Lee, P, Doucleff, M, Wemmer, D.E. | 登録日 | 2012-07-15 | 公開日 | 2013-05-29 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus J.Mol.Biol., 425, 2013
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4FTH
| Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA | 分子名称: | 5'-D(*AP*CP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*GP*CP*AP*T)-3', 5'-D(P*GP*AP*TP*GP*CP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*A)-3', Transcriptional regulator (NtrC family) | 著者 | Vidangos, N.K, Heideker, J, Lyubimov, A.Y, Lamers, M, Huo, Y, Pelton, J.G, Ton, J, Gralla, J.D, Kuriyan, J, Berger, J.M, Wemmer, D.E. | 登録日 | 2012-06-27 | 公開日 | 2012-08-29 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (3.004 Å) | 主引用文献 | DNA Recognition by a sigma (54) Transcriptional Activator from Aquifex aeolicus. J.Mol.Biol., 426, 2014
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4G3V
| Crystal structure of A. Aeolicus nlh2 gaf domain in an inactive state | 分子名称: | CHLORIDE ION, Transcriptional regulator nlh2 | 著者 | Batchelor, J.D, Lee, P, Wang, A, Doucleff, M, Wemmer, D.E. | 登録日 | 2012-07-15 | 公開日 | 2013-05-29 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus J.Mol.Biol., 425, 2013
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4L9M
| Autoinhibited state of the Ras-specific exchange factor RasGRP1 | 分子名称: | CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ... | 著者 | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | 登録日 | 2013-06-18 | 公開日 | 2013-08-21 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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4L4U
| Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains | 分子名称: | Transcriptional regulator (NtrC family) | 著者 | Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | 登録日 | 2013-06-09 | 公開日 | 2013-08-28 | 最終更新日 | 2013-10-23 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
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4L5E
| Crystal structure of A. aeolicus NtrC1 DNA binding domain | 分子名称: | SULFATE ION, Transcriptional regulator (NtrC family) | 著者 | Young, A, Maris, A.E, Vidangos, N.K, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. | 登録日 | 2013-06-10 | 公開日 | 2013-08-28 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | 主引用文献 | Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
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4L9U
| Structure of C-terminal coiled coil of RasGRP1 | 分子名称: | GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION | 著者 | Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J. | 登録日 | 2013-06-18 | 公開日 | 2013-08-21 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.6014 Å) | 主引用文献 | Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
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1ZDM
| Crystal Structure of Activated CheY Bound to Xe | 分子名称: | Chemotaxis protein cheY, MANGANESE (II) ION, XENON | 著者 | Lowery, T.J, Doucleff, M, Ruiz, E.J, Rubin, S.M, Pines, A, Wemmer, D.E. | 登録日 | 2005-04-14 | 公開日 | 2005-04-26 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR. Protein Sci., 14, 2005
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2JMP
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2KIC
| n-NafY. N-terminal domain of NafY | 分子名称: | Nitrogenase gamma subunit | 著者 | Phillips, A.H, Hernandez, J.A, Erbil, K, Pelton, J.G, Wemmer, D.E, Rubio, L.M. | 登録日 | 2009-05-01 | 公開日 | 2010-12-08 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Biological activity and solution structure of the apo-dinitrogenase binding domain of NafY J.Biol.Chem., 2010
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2LAI
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2MXD
| Solution structure of VPg of porcine sapovirus | 分子名称: | Viral protein genome-linked | 著者 | Kim, J, Hwang, H, Min, H, Yun, H, Cho, K, Pelton, J.G, Wemmer, D.E, Lee, C. | 登録日 | 2014-12-24 | 公開日 | 2015-04-15 | 最終更新日 | 2023-06-14 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the porcine sapovirus VPg core reveals a stable three-helical bundle with a conserved surface patch. Biochem.Biophys.Res.Commun., 459, 2015
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2O9L
| AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | 分子名称: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | 著者 | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | 登録日 | 2006-12-13 | 公開日 | 2007-07-17 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural basis of DNA recognition by the alternative sigma-factor, sigma54. J.Mol.Biol., 369, 2007
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2O8K
| NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element | 分子名称: | 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN | 著者 | Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E. | 登録日 | 2006-12-12 | 公開日 | 2007-07-17 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural basis of DNA recognition by the alternative sigma-factor, sigma54. J.Mol.Biol., 369, 2007
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2PIS
| Efforts toward Expansion of the Genetic Alphabet: Structure and Replication of Unnatural Base Pairs | 分子名称: | DNA (5'-D(*CP*GP*(CBR)P*GP*AP*AP*(FFD)P*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION | 著者 | Matsuda, S, Fillo, J.D, Henry, A.A, Wilkins, S.J, Rai, P, Dwyer, T.J, Geierstanger, B.H, Wemmer, D.E, Schultz, P.G, Spraggon, G, Romesberg, F.E. | 登録日 | 2007-04-13 | 公開日 | 2007-10-30 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Efforts toward expansion of the genetic alphabet: structure and replication of unnatural base pairs. J.Am.Chem.Soc., 129, 2007
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