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3HS3
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BU of 3hs3 by Molmil
Crystal structure of periplasmic binding ribose operon repressor protein from Lactobacillus acidophilus
Descriptor: Ribose operon repressor
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-10
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of periplasmic binding ribose operon repressor protein from Lactobacillus acidophilus
To be Published
3HZ6
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BU of 3hz6 by Molmil
Crystal structure of xylulokinase from Chromobacterium violaceum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-XYLULOSE, GLYCEROL, ...
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-23
Release date:2009-07-21
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of xylulokinase from Chromobacterium violaceum
To be Published
3IBQ
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BU of 3ibq by Molmil
Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Pyridoxal kinase
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-16
Release date:2009-07-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ATP
To be Published
3I8B
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BU of 3i8b by Molmil
The crystal structure of xylulose kinase from Bifidobacterium adolescentis
Descriptor: MAGNESIUM ION, Xylulose kinase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-09
Release date:2009-08-04
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of xylulose kinase from Bifidobacterium adolescentis
To be Published
3IN1
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BU of 3in1 by Molmil
Crystal structure of a putative Ribokinase in complex with ADP from E.coli
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Uncharacterized sugar kinase ydjH
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-11
Release date:2009-09-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a putative Ribokinase in complex with ADP from E.coli
To be Published
3IO1
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BU of 3io1 by Molmil
Crystal Structure of Aminobenzoyl-glutamate utilization protein from Klebsiella pneumoniae
Descriptor: Aminobenzoyl-glutamate utilization protein, SODIUM ION, YTTRIUM (III) ION
Authors:Kumaran, D, Baumann, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-13
Release date:2009-08-25
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Aminobenzoyl-glutamate utilization protein from Klebsiella pneumoniae
To be Published
3IKH
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BU of 3ikh by Molmil
Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Carbohydrate kinase, GLYCEROL
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-05
Release date:2009-08-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
To be Published
3ID9
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BU of 3id9 by Molmil
Crystal structure of a MutT/NUDIX family protein from Bacillus thuringiensis
Descriptor: CHLORIDE ION, MutT/NUDIX family protein, SULFATE ION
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-20
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of a MutT/NUDIX family protein from Bacillus thuringiensis
To be Published
3IE7
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BU of 3ie7 by Molmil
The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Lin2199 protein, ...
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-22
Release date:2009-08-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A
To be Published
3IPI
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BU of 3ipi by Molmil
Crystal Structure of a Geranyltranstransferase from the Methanosarcina mazei
Descriptor: Geranyltranstransferase, MALONIC ACID
Authors:Kumaran, D, Mohammed, M.B, Brown, A, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-17
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a Geranyltranstransferase from the Methanosarcina mazei
To be Published
3ILH
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BU of 3ilh by Molmil
Crystal structure of Two component response regulator from Cytophaga hutchinsonii
Descriptor: Two component response regulator
Authors:Syed Ibrahim, B, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-07
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of Two component response regulator from Cytophaga hutchinsonii
To be Published
3ILV
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BU of 3ilv by Molmil
Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
Descriptor: Glutamine-dependent NAD(+) synthetase
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-07
Release date:2009-08-18
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
To be Published
3IFR
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BU of 3ifr by Molmil
The crystal structure of xylulose kinase from Rhodospirillum rubrum
Descriptor: Carbohydrate kinase, FGGY, PHOSPHATE ION
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-24
Release date:2009-08-25
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of xylulose kinase from Rhodospirillum rubrum
To be Published
3IQ0
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BU of 3iq0 by Molmil
Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, putative Ribokinase II
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-18
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a putative Ribokinase (II)in complex with ATP and Mg+2 from E.coli
To be Published
8GOD
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BU of 8god by Molmil
Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589
Descriptor: Protein-arginine deiminase type-4, [(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone
Authors:Swaminathan, S, Birudukota, S, Vaithilingam, K, Kandan, S, Asaithambi, K, Kathiresan, N, Gosu, R, Rajagopal, S, Sadhu, N.
Deposit date:2022-08-24
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Alleviation of arthritis through prevention of neutrophil extracellular traps by an orally available inhibitor of protein arginine deiminase 4.
Sci Rep, 13, 2023
7TLT
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BU of 7tlt by Molmil
SARS-CoV-2 Spike-derived peptide S489-497 (YFPLQSYGF) presented by HLA-A*29:02
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A alpha chain, ...
Authors:Murdolo, L.D, Szeto, C, Gras, S.
Deposit date:2022-01-18
Release date:2022-10-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ablation of CD8 + T cell recognition of an immunodominant epitope in SARS-CoV-2 Omicron variants BA.1, BA.2 and BA.3.
Nat Commun, 13, 2022
6V2F
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BU of 6v2f by Molmil
Crystal structure of the HIV capsid hexamer bound to the small molecule long-acting inhibitor, GS-6207
Descriptor: HIV-1 capsid, N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
Authors:Appleby, T.C, Link, J.O, Yant, S.R, Villasenor, A.G, Somoza, J.R, Hu, E.Y, Schroeder, S.D, Cihlar, T.
Deposit date:2019-11-22
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Clinical targeting of HIV capsid protein with a long-acting small molecule.
Nature, 584, 2020
7LGD
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BU of 7lgd by Molmil
HLA-B*07:02 in complex with SARS-CoV-2 nucleocapsid peptide N105-113
Descriptor: Beta-2-microglobulin, CHLORIDE ION, HLA class I histocompatibility antigen, ...
Authors:Gras, S, Szeto, C, Chatzileontiadou, D.S.M.
Deposit date:2021-01-20
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:CD8 + T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses.
Immunity, 54, 2021
7LGT
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BU of 7lgt by Molmil
HLA-B*07:02 in complex with 229E-derived coronavirus nucleocapsid peptide N75-83
Descriptor: BROMIDE ION, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Gras, S, Szeto, C, Chatzileontiadou, D.S.M.
Deposit date:2021-01-21
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:CD8 + T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses.
Immunity, 54, 2021
8TU6
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BU of 8tu6 by Molmil
CryoEM structure of PI3Kalpha
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Valverde, R, Shi, H, Holliday, M.
Deposit date:2023-08-15
Release date:2023-11-15
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TSC
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BU of 8tsc by Molmil
Human PI3K p85alpha/p110alpha H1047R bound to compound 3
Descriptor: (1S)-7-[3-fluoro-5-(trifluoromethyl)benzamido]-N-methyl-1-(2-methylphenyl)-3-oxo-2,3-dihydro-1H-isoindole-5-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TSD
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BU of 8tsd by Molmil
Human PI3K p85alpha/p110alpha bound to RLY-2608
Descriptor: N-{(3R,6M)-3-(2-chloro-5-fluorophenyl)-6-[(4S)-5-cyano[1,2,4]triazolo[1,5-a]pyridin-6-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}-3-fluoro-5-(trifluoromethyl)benzamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TS8
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BU of 8ts8 by Molmil
p85alpha/p110alpha heterodimer H1047R mutant
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TSB
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BU of 8tsb by Molmil
Human PI3K p85alpha/p110alpha bound to compound 2
Descriptor: 5-(3-bromo-5-fluorobenzamido)-N-methyl-6-(2-methylanilino)pyridine-3-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TS9
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BU of 8ts9 by Molmil
Human PI3K p85alpha/p110alpha H1047R bound to compound 1
Descriptor: 5-[3-fluoro-5-(trifluoromethyl)benzamido]-N-methyl-6-(2-methylanilino)pyridine-3-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024

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PDB entries from 2024-05-22

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