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2A1B
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BU of 2a1b by Molmil
Carboxysome shell protein ccmK2
Descriptor: Carbon dioxide concentrating mechanism protein ccmK homolog 2
Authors:Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
Deposit date:2005-06-20
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A10
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BU of 2a10 by Molmil
carboxysome shell protein ccmK4
Descriptor: Carbon dioxide concentrating mechanism protein ccmK homolog 4
Authors:Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
Deposit date:2005-06-17
Release date:2005-08-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
2A5X
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BU of 2a5x by Molmil
Crystal Structure of a Cross-linked Actin Dimer
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Actin, alpha skeletal muscle, ...
Authors:Kudryashov, D.S, Sawaya, M.R, Adisetiyo, H, Norcross, T, Hegyi, G, Reisler, E, Yeates, T.O.
Deposit date:2005-07-01
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The crystal structure of a cross-linked actin dimer suggests a detailed molecular interface in F-actin
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A18
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BU of 2a18 by Molmil
carboxysome shell protein ccmK4, crystal form 2
Descriptor: AMMONIUM ION, Carbon dioxide concentrating mechanism protein ccmK homolog 4
Authors:Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
Deposit date:2005-06-18
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
6PEO
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BU of 6peo by Molmil
Cryo-EM structure of alpha-synuclein H50Q Narrow Fibril
Descriptor: Alpha-synuclein
Authors:Boyer, D.R, Li, B, Sawaya, M.R, Jiang, L, Eisenberg, D.S.
Deposit date:2019-06-20
Release date:2019-11-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of fibrils formed by alpha-synuclein hereditary disease mutant H50Q reveal new polymorphs.
Nat.Struct.Mol.Biol., 26, 2019
6PK8
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BU of 6pk8 by Molmil
Antibody scFv-M204 dimeric state
Descriptor: SULFATE ION, scFv-M204 antibody
Authors:Abskharon, R, Sawaya, M.R, Seidler, P.M, Cascio, D, Eisenberg, D.S.
Deposit date:2019-06-28
Release date:2020-06-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of a conformational antibody that binds tau oligomers and inhibits pathological seeding by extracts from donors with Alzheimer's disease.
J.Biol.Chem., 295, 2020
6PQA
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BU of 6pqa by Molmil
GAVVGG segment 119-124 from human prion
Descriptor: Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2019-07-08
Release date:2020-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core.
Nat.Struct.Mol.Biol., 27, 2020
6PSC
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BU of 6psc by Molmil
Antibody scFv-M204 trimeric state
Descriptor: scFv-M204 antibody
Authors:Abskharon, R, Sawaya, M.R, Seidler, P.M, Cascio, D, Eisenberg, D.S.
Deposit date:2019-07-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of a conformational antibody that binds tau oligomers and inhibits pathological seeding by extracts from donors with Alzheimer's disease.
J.Biol.Chem., 295, 2020
2RCF
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BU of 2rcf by Molmil
Carboxysome Shell protein, OrfA from H. Neapolitanus
Descriptor: CHLORIDE ION, GLYCEROL, Unidentified carboxysome polypeptide
Authors:Kerfeld, C.A, Sawaya, M.R, Yeates, T.O.
Deposit date:2007-09-19
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
2RIF
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BU of 2rif by Molmil
CBS domain protein PAE2072 from Pyrobaculum aerophilum complexed with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CESIUM ION, Conserved protein with 2 CBS domains
Authors:Lee, T.M, King, N.P, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2007-10-10
Release date:2008-06-17
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures and Functional Implications of an AMP-Binding Cystathionine beta-Synthase Domain Protein from a Hyperthermophilic Archaeon.
J.Mol.Biol., 380, 2008
2RIH
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BU of 2rih by Molmil
CBS domain protein PAE2072 from Pyrobaculum aerophilum
Descriptor: ACETIC ACID, Conserved protein with 2 CBS domains, SULFATE ION
Authors:Lee, T.M, King, N.P, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2007-10-10
Release date:2008-06-17
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures and Functional Implications of an AMP-Binding Cystathionine beta-Synthase Domain Protein from a Hyperthermophilic Archaeon
J.Mol.Biol., 380, 2008
2QW7
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BU of 2qw7 by Molmil
Carboxysome Subunit, CcmL
Descriptor: Carbon dioxide concentrating mechanism protein ccmL, GLYCEROL
Authors:Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O.
Deposit date:2007-08-09
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
8UJA
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BU of 8uja by Molmil
T33-fn10 - Designed Tetrahedral Protein Cage Using Fragment-based Hydrogen Bond Networks
Descriptor: T33-fn10: engineered DrsE like sulfur reductase, T33-fn10: engineered enoyl-CoA hydratase/isomerase
Authors:Meador, K, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-10-11
Release date:2024-03-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (6 Å)
Cite:A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 32, 2024
6AVB
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BU of 6avb by Molmil
CryoEM structure of Mical Oxidized Actin (Class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
Authors:Grintsevich, E.E, Ge, P, Sawaya, M.R, Yesilyurt, H.G, Terman, J.R, Zhou, Z.H, Reisler, E.
Deposit date:2017-09-01
Release date:2018-01-17
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
6AV9
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BU of 6av9 by Molmil
CryoEM structure of Mical Oxidized Actin (Class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
Authors:Grintsevich, E.E, Ge, P, Sawaya, M.R, Yesilyurt, H.G, Terman, J.R, Zhou, Z.H, Reisler, E.
Deposit date:2017-09-01
Release date:2018-01-17
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
6B79
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BU of 6b79 by Molmil
Curved pair of sheets formed from SOD1 residues 28-38 with familial mutation G37R.
Descriptor: 7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid, Superoxide dismutase [Cu-Zn]
Authors:Sangwan, S, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2017-10-03
Release date:2018-05-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations.
Protein Sci., 27, 2018
6BCS
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BU of 6bcs by Molmil
LilrB2 D1D2 domains complexed with benzamidine
Descriptor: BENZAMIDINE, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Cao, Q, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2017-10-20
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibiting amyloid-beta cytotoxicity through its interaction with the cell surface receptor LilrB2 by structure-based design.
Nat Chem, 10, 2018
7QYD
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BU of 7qyd by Molmil
mosquitocidal Cry11Ba determined at pH 6.5 from naturally-occurring nanocrystals by Serial femtosecond crystallography
Descriptor: Pesticidal crystal protein Cry11Ba
Authors:De Zitter, E, Tetreau, G, Andreeva, E.A, Coquelle, N, Colletier, J.-P, Sawaya, M.R, Schibrowsky, N.A, Cascio, D, Rodriguez, J.A.
Deposit date:2022-01-28
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:De novo determination of mosquitocidal Cry11Aa and Cry11Ba structures from naturally-occurring nanocrystals.
Nat Commun, 13, 2022
7R1E
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BU of 7r1e by Molmil
Mosquitocidal Cry11Ba determined at pH 10.4 from naturally-occurring nanocrystals by Serial femtosecond crystallography
Descriptor: GLYCEROL, Pesticidal crystal protein Cry11Ba
Authors:Colletier, J.-P, Sawaya, M.R, Schibrowsky, N.A, Cascio, D, Rodriguez, J.A.
Deposit date:2022-02-02
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:De novo determination of mosquitocidal Cry11Aa and Cry11Ba structures from naturally-occurring nanocrystals.
Nat Commun, 13, 2022
2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2007-09-20
Release date:2007-10-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
2Y3L
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BU of 2y3l by Molmil
Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 2
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y3K
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BU of 2y3k by Molmil
Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 1
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y3J
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BU of 2y3j by Molmil
Structure of segment AIIGLM from the amyloid-beta peptide (Ab, residues 30-35)
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y5Y
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BU of 2y5y by Molmil
Crystal structure of LacY in complex with an affinity inactivator
Descriptor: 2-sulfanylethyl beta-D-galactopyranoside, BARIUM ION, LACTOSE PERMEASE
Authors:Chaptal, V, Kwon, S, Sawaya, M.R, Guan, L, Kaback, H.R, Abramson, J.
Deposit date:2011-01-19
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Crystal Structure of Lactose Permease in Complex with an Affinity Inactivator Yields Unique Insight Into Sugar Recognition.
Proc.Natl.Acad.Sci.USA, 108, 2011
2Y29
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BU of 2y29 by Molmil
Structure of segment KLVFFA from the amyloid-beta peptide (Ab, residues 16-21), alternate polymorph III
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-14
Release date:2011-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011

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