Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5VF3
DownloadVisualize
BU of 5vf3 by Molmil
Bacteriophage T4 isometric capsid
分子名称: Capsid vertex protein gp24, Highly immunogenic outer capsid protein, Major capsid protein, ...
著者Chen, Z, Sun, L, Zhang, Z, Fokine, A, Padilla-Sanchez, V, Hanein, D, Jiang, W, Rossmann, M.G, Rao, V.B.
登録日2017-04-06
公開日2017-09-13
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of the bacteriophage T4 isometric head at 3.3- angstrom resolution and its relevance to the assembly of icosahedral viruses.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3JA7
DownloadVisualize
BU of 3ja7 by Molmil
Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
分子名称: Portal protein gp20
著者Sun, L, Zhang, X, Gao, S, Rao, P.A, Padilla-Sanchez, V, Chen, Z, Sun, S, Xiang, Y, Subramaniam, S, Rao, V.B, Rossmann, M.G.
登録日2015-04-21
公開日2015-07-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution.
Nat Commun, 6, 2015
4HUD
DownloadVisualize
BU of 4hud by Molmil
Structure of the bacteriophage T4 tail terminator protein, gp15.
分子名称: Tail connector protein Gp15
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-02
公開日2013-02-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7001 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
4HUH
DownloadVisualize
BU of 4huh by Molmil
Structure of the bacteriophage T4 tail terminator protein, gp15 (C-terminal truncation mutant 1-261).
分子名称: Tail connector protein Gp15
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-02
公開日2013-02-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3SHS
DownloadVisualize
BU of 3shs by Molmil
Three N-terminal domains of the bacteriophage RB49 Highly Immunogenic Outer Capsid protein (Hoc)
分子名称: Hoc head outer capsid protein, MAGNESIUM ION
著者Fokine, A, Islam, M.Z, Zhang, Z, Bowman, V.D, Rao, V.B, Rossmann, M.G.
登録日2011-06-16
公開日2011-06-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.951 Å)
主引用文献Structure of the three N-terminal immunoglobulin domains of the highly immunogenic outer capsid protein from a T4-like bacteriophage.
J.Virol., 85, 2011
7VRT
DownloadVisualize
BU of 7vrt by Molmil
The unexpanded head structure of phage T4
分子名称: Capsid vertex protein, Major capsid protein
著者Fang, Q, Tang, W, Fokine, A, Mahalingam, M, Shao, Q, Rossmann, M.G, Rao, V.B.
登録日2021-10-24
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structures of a large prolate virus capsid in unexpanded and expanded states generate insights into the icosahedral virus assembly.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VS5
DownloadVisualize
BU of 7vs5 by Molmil
The expanded head structure of phage T4
分子名称: Capsid vertex protein, Major capsid protein, Small outer capsid protein
著者Fang, Q, Tang, W, Fokine, A, Mahalingam, M, Shao, Q, Rossmann, M.G, Rao, V.B.
登録日2021-10-25
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of a large prolate virus capsid in unexpanded and expanded states generate insights into the icosahedral virus assembly.
Proc.Natl.Acad.Sci.USA, 119, 2022
8T9R
DownloadVisualize
BU of 8t9r by Molmil
T4 highly immunogenic outer capsid protein C-terminal domain bound to a vertex-proximal gp23* capsomer of the prolate capsid in two preferred orientations.
分子名称: Highly immunogenic outer capsid protein, Mature major capsid protein
著者Fokine, A, Rao, V.B.
登録日2023-06-24
公開日2023-07-19
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and Function of Hoc-A Novel Environment Sensing Device Encoded by T4 and Other Bacteriophages.
Viruses, 15, 2023
8T1X
DownloadVisualize
BU of 8t1x by Molmil
T4 highly immunogenic outer capsid protein C-terminal domain bound to the vertex-proximal gp23* capsomer of the isometric head in two preferred orientations
分子名称: Highly immunogenic outer capsid protein, Mature major capsid protein gp23*
著者Fokine, A, Rao, V.B.
登録日2023-06-04
公開日2023-07-19
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and Function of Hoc-A Novel Environment Sensing Device Encoded by T4 and Other Bacteriophages.
Viruses, 15, 2023
3IG9
DownloadVisualize
BU of 3ig9 by Molmil
Small outer capsid protein (SOC) of bacteriophage RB69
分子名称: IMIDAZOLE, Soc small outer capsid protein
著者Li, Q, Fokine, A, O'Donnell, E, Rao, V.B, Rossmann, M.G.
登録日2009-07-27
公開日2009-12-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like Phages
J.Mol.Biol., 395, 2010
3IGE
DownloadVisualize
BU of 3ige by Molmil
Small outer capsid protein (Soc) from bacteriophage RB69
分子名称: IMIDAZOLE, Soc small outer capsid protein
著者Li, Q, Fokine, A, O'Donnell, E, Rao, V.B, Rossmann, M.G.
登録日2009-07-27
公開日2009-12-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.254 Å)
主引用文献Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like Phages
J.Mol.Biol., 395, 2010
3J2M
DownloadVisualize
BU of 3j2m by Molmil
The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the extended T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-09
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3J2O
DownloadVisualize
BU of 3j2o by Molmil
Model of the bacteriophage T4 fibritin based on the cryo-EM reconstruction of the contracted T4 tail containing the phage collar and whiskers
分子名称: Fibritin
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A.A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-12
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3J2N
DownloadVisualize
BU of 3j2n by Molmil
The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the contracted T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-10
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
6UZC
DownloadVisualize
BU of 6uzc by Molmil
Portal vertex structure of bacteriophage T4
分子名称: Major capsid protein, Portal protein
著者Fang, Q, Fokine, A, Rao, V.B.
登録日2019-11-14
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural morphing in a symmetry-mismatched viral vertex.
Nat Commun, 11, 2020
8GMO
DownloadVisualize
BU of 8gmo by Molmil
Bacteriophage T4 capsid shell containing 9DE insertions into the gp23* major capsid protein subunits
分子名称: Mature capsid vertex protein, Mature major capsid protein
著者Fokine, A, Rao, V.B.
登録日2023-03-26
公開日2023-05-10
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Design of bacteriophage T4-based artificial viral vectors for human genome remodeling.
Nat Commun, 14, 2023
3TXS
DownloadVisualize
BU of 3txs by Molmil
Crystal Structure of phage 44RR small terminase gp16
分子名称: Terminase DNA packaging enzyme small subunit
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2011-09-23
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
3C6A
DownloadVisualize
BU of 3c6a by Molmil
Crystal Structure of the RB49 gp17 nuclease domain
分子名称: MAGNESIUM ION, Terminase large subunit
著者Sun, S, Rossmann, M.G.
登録日2008-02-04
公開日2009-01-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.
Cell(Cambridge,Mass.), 135, 2008
3C6H
DownloadVisualize
BU of 3c6h by Molmil
Crystal Structure of the RB49 gp17 nuclease domain
分子名称: MAGNESIUM ION, Terminase large subunit
著者Sun, S, Rossmann, M.G.
登録日2008-02-04
公開日2009-01-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.
Cell(Cambridge,Mass.), 135, 2008
3TXQ
DownloadVisualize
BU of 3txq by Molmil
Crystal Structure of phage 44RR small terminase gp16
分子名称: Terminase DNA packaging enzyme small subunit
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2011-09-23
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
8CZZ
DownloadVisualize
BU of 8czz by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with Temsavir, 8ANC195, and 10-1074
分子名称: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, Y, Pozharski, E, Tolbert, W, Pazgier, M.
登録日2022-05-25
公開日2023-05-31
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
8DOK
DownloadVisualize
BU of 8dok by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, Y, Zhou, F, Huang, R, Tolbert, W, Pazgier, M.
登録日2022-07-13
公開日2023-07-19
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
8G6U
DownloadVisualize
BU of 8g6u by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with 8ANC195 and 10-1074
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CRF-1_AE T/F100 HIV-1 gp41, ...
著者Chen, Y, Zhou, F, Huang, R, Tolbert, W, Pazgier, M.
登録日2023-02-16
公開日2023-11-08
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
3EZK
DownloadVisualize
BU of 3ezk by Molmil
Bacteriophage T4 gp17 motor assembly based on crystal structures and cryo-EM reconstructions
分子名称: DNA packaging protein Gp17
著者Sun, S, Rossmann, M.G.
登録日2008-10-23
公開日2009-01-13
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (34 Å)
主引用文献The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.
Cell(Cambridge,Mass.), 135, 2008
3CPE
DownloadVisualize
BU of 3cpe by Molmil
Crystal Structure of T4 gp17
分子名称: DNA packaging protein Gp17, PHOSPHATE ION, SODIUM ION
著者Sun, S, Rossmann, M.G.
登録日2008-03-31
公開日2009-01-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces
Cell(Cambridge,Mass.), 135, 2008

 

12>

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon