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4JT5
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BU of 4jt5 by Molmil
mTORdeltaN-mLST8-pp242 complex
Descriptor: 2-[4-amino-1-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl]-1H-indol-5-ol, Serine/threonine-protein kinase mTOR, Target of rapamycin complex subunit LST8
Authors:Pavletich, N.P, Yang, H.
Deposit date:2013-03-22
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:mTOR kinase structure, mechanism and regulation.
Nature, 497, 2013
4JSX
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BU of 4jsx by Molmil
structure of mTORDeltaN-mLST8-Torin2 complex
Descriptor: 9-(6-aminopyridin-3-yl)-1-[3-(trifluoromethyl)phenyl]benzo[h][1,6]naphthyridin-2(1H)-one, Serine/threonine-protein kinase mTOR, Target of rapamycin complex subunit LST8
Authors:Pavletich, N.P, Yang, H.
Deposit date:2013-03-22
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:mTOR kinase structure, mechanism and regulation.
Nature, 497, 2013
5WBL
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BU of 5wbl by Molmil
Crystal structure of the Arabidopsis thaliana Raptor in complex with the TOS peptide of human PRAS40
Descriptor: Proline-rich AKT1 substrate 1, Regulatory-associated protein of TOR 1
Authors:Pavletich, N.P, Jiang, X.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBH
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BU of 5wbh by Molmil
Structure of the FRB domain of mTOR bound to a substrate recruitment peptide of S6K1
Descriptor: Ribosomal protein S6 kinase beta-1, Serine/threonine-protein kinase mTOR
Authors:Pavletich, N.P, Yang, H.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBK
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BU of 5wbk by Molmil
Crystal structure of the arabidopsis thaliana Raptor in complex with the TOS peptide of human S6K1
Descriptor: Regulatory-associated protein of TOR 1, Ribosomal protein S6 kinase beta-1
Authors:Pavletich, N.P, Jiang, X.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBI
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BU of 5wbi by Molmil
Crystal structure of the Arabidopsis thaliana Raptor
Descriptor: Regulatory-associated protein of TOR 1
Authors:Pavletich, N.P, Jiang, X.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBU
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BU of 5wbu by Molmil
Crystal structure of mTOR(deltaN)-mLST8-PRAS40(alpha-helix & beta-strand) complex
Descriptor: Proline-rich AKT1 substrate 1, Serine/threonine-protein kinase mTOR, Target of rapamycin complex subunit LST8
Authors:Pavletich, N.P, Yang, H.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBJ
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BU of 5wbj by Molmil
Crystal structure of the arabidopsis thaliana Raptor in complex with the TOS peptide of human 4EBP1
Descriptor: Eukaryotic translation initiation factor 4E-binding protein 1, Regulatory-associated protein of TOR 1
Authors:Pavletich, N.P, Jiang, X.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5WBY
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BU of 5wby by Molmil
Crystal structure of mTOR(deltaN)-mLST8-PRAS40(beta-strand) complex
Descriptor: Proline-rich AKT1 substrate 1, Serine/threonine-protein kinase mTOR, Target of rapamycin complex subunit LST8
Authors:Pavletich, N.P, Yang, H.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
3CMX
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BU of 3cmx by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*DAP*DAP*DAP*DAP*DAP*DAP*DAP*DAP*DAP*DAP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DT)-3'), ...
Authors:Pavletich, N.P.
Deposit date:2008-03-24
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
3CMW
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BU of 3cmw by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DT)-3'), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2008-03-24
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
3CMV
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BU of 3cmv by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein recA
Authors:Pavletich, N.P.
Deposit date:2008-03-24
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
3CMU
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BU of 3cmu by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DTP*DT)-3'), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2008-03-24
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
7JY9
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BU of 7jy9 by Molmil
Structure of a 9 base pair RecA-D loop complex
Descriptor: DNA (27-MER), DNA (42-MER), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2020-08-29
Release date:2020-11-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
7JY6
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BU of 7jy6 by Molmil
Analysis of a strand exchange reaction with a mini filament of 9-RecA, oligo(dT)27 primary ssDNA, non-homologous 120 bp dsDNA and ATPgammaS
Descriptor: DNA (27-MER), DNA (45-MER), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2020-08-29
Release date:2020-11-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
7JY8
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BU of 7jy8 by Molmil
Analysis of a strand exchange reaction with a mini filament of 9-RecA, 27-mer ssDNA, partially-homologous 67 bp dsDNA and ATPgammaS
Descriptor: DNA (27-MER), DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2020-08-29
Release date:2020-11-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
7JY7
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BU of 7jy7 by Molmil
Structure of a 12 base pair RecA-D loop complex
Descriptor: DNA (27-MER), DNA (48-MER), MAGNESIUM ION, ...
Authors:Pavletich, N.P.
Deposit date:2020-08-29
Release date:2020-11-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures.
Nature, 586, 2020
1IYJ
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BU of 1iyj by Molmil
STRUCTURE OF A BRCA2-DSS1 COMPLEX
Descriptor: Deleted in split hand/split foot protein 1, breast cancer susceptibility
Authors:Pavletich, N.P, Jeffrey, P.D, Yang, H.J.
Deposit date:2002-08-28
Release date:2002-10-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.
Science, 297, 2002
1J8F
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BU of 1j8f by Molmil
HUMAN SIRT2 HISTONE DEACETYLASE
Descriptor: SIRTUIN 2, ISOFORM 1, ZINC ION
Authors:Pavletich, N.P, Finnin, M.S, Donigian, J.R.
Deposit date:2001-05-21
Release date:2001-07-06
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the histone deacetylase SIRT2.
Nat.Struct.Biol., 8, 2001
3O4Z
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BU of 3o4z by Molmil
Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes
Descriptor: Telomere length regulation protein TEL2
Authors:Xie, Y, Pavletich, N.P.
Deposit date:2010-07-27
Release date:2010-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes.
Genes Dev., 24, 2010
7SIC
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BU of 7sic by Molmil
Human ATM Dimer
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM
Authors:Warren, C, Pavletich, N.P.
Deposit date:2021-10-13
Release date:2022-02-02
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Structure of the human ATM kinase and mechanism of Nbs1 binding.
Elife, 11, 2022
7SID
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BU of 7sid by Molmil
Human ATM Dimer Bound to Nbs1
Descriptor: MAGNESIUM ION, Nibrin, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Warren, C, Pavletich, N.P.
Deposit date:2021-10-13
Release date:2022-02-02
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structure of the human ATM kinase and mechanism of Nbs1 binding.
Elife, 11, 2022
1OZJ
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BU of 1ozj by Molmil
Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution
Descriptor: SMAD 3, Smad binding element, ZINC ION
Authors:Chai, J, Wu, J.-W, Yan, N, Massague, J, Pavletich, N.P, Shi, Y.
Deposit date:2003-04-09
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Features of a Smad3 MH1-DNA complex. Roles of water and zinc in DNA binding.
J.Biol.Chem., 278, 2003
1P22
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BU of 1p22 by Molmil
Structure of a beta-TrCP1-Skp1-beta-catenin complex: destruction motif binding and lysine specificity on the SCFbeta-TrCP1 ubiquitin ligase
Descriptor: Beta-catenin, F-box/WD-repeat protein 1A, Skp1
Authors:Wu, G, Xu, G, Schulman, B.A, Jeffrey, P.D, Harper, J.W, Pavletich, N.P.
Deposit date:2003-04-14
Release date:2003-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a beta-TrCP1-Skp1-beta-Catenin complex: destruction motif binding and lysine specificity of the SCFbeta-TrCP1 ubiquitin ligase
Mol.Cell, 11, 2003
1PI1
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BU of 1pi1 by Molmil
Crystal structure of a human Mob1 protein; toward understanding Mob-regulated cell cycle pathways.
Descriptor: Mob1A, ZINC ION
Authors:Stavridi, E.S, Harris, K.G, Huyen, Y, Bothos, J, Voewerd, P.M, Stayrook, S.E, Jeffrey, P.D, Pavletich, N.P, Luca, F.C.
Deposit date:2003-05-29
Release date:2003-09-30
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a human mob1 protein. Toward understanding mob-regulated cell cycle pathways.
Structure, 11, 2003

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