Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4DQD
DownloadVisualize
BU of 4dqd by Molmil
The crystal structure of a transporter in complex with 3-phenylpyruvic acid
Descriptor: 3-HYDROXYPYRUVIC ACID, 3-PHENYLPYRUVIC ACID, Extracellular ligand-binding receptor, ...
Authors:Tan, K, Mack, J.C, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-02-15
Release date:2012-02-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4OQJ
DownloadVisualize
BU of 4oqj by Molmil
Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmQ KS1
Descriptor: GLYCEROL, PHOSPHATE ION, PKS, ...
Authors:Nocek, B, Mack, J, Endras, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-02-09
Release date:2014-03-19
Last modified:2016-11-02
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XA9
DownloadVisualize
BU of 4xa9 by Molmil
Crystal structure of the complex between the N-terminal domain of RavJ and LegL1 from Legionella pneumophila str. Philadelphia
Descriptor: Gala protein type 1, 3 or 4, Uncharacterized protein
Authors:Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-13
Release date:2015-01-28
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
4YGO
DownloadVisualize
BU of 4ygo by Molmil
Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
Descriptor: CALCIUM ION, METHANOL, Spermidine n1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-02-26
Release date:2015-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate-Induced Allosteric Change in the Quaternary Structure of the Spermidine N-Acetyltransferase SpeG.
J.Mol.Biol., 427, 2015
4R87
DownloadVisualize
BU of 4r87 by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with CoA and spermine
Descriptor: COENZYME A, DI(HYDROXYETHYL)ETHER, SPERMINE, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-29
Release date:2015-03-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4R57
DownloadVisualize
BU of 4r57 by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, DI(HYDROXYETHYL)ETHER, Spermidine n1-acetyltransferase, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Shuvalova, L, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-20
Release date:2015-03-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4RXI
DownloadVisualize
BU of 4rxi by Molmil
Structure of C-terminal domain of uncharacterized protein from Legionella pneumophila
Descriptor: hypothetical protein lpg0944
Authors:Cuff, M, Nocek, B, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-11
Release date:2015-05-06
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
4RXV
DownloadVisualize
BU of 4rxv by Molmil
The crystal structure of the N-terminal fragment of uncharacterized protein from Legionella pneumophila
Descriptor: hypothetical protein lpg0944
Authors:Nocek, B, Cuff, M, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-12
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.099 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
1ZKI
DownloadVisualize
BU of 1zki by Molmil
Structure of conserved protein PA5202 from Pseudomonas aeruginosa
Descriptor: ACETIC ACID, hypothetical protein PA5202
Authors:Cuff, M.E, Evdokimova, E, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-05-02
Release date:2005-06-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and activity of the Pseudomonas aeruginosa hotdog-fold thioesterases PA5202 and PA2801.
Biochem.J., 444, 2012
5VO3
DownloadVisualize
BU of 5vo3 by Molmil
Crystal structure of DapE in complex with the products (succinic acid and diaminopimelic acid)
Descriptor: 2,6-DIAMINOPIMELIC ACID, SUCCINIC ACID, Succinyl-diaminopimelate desuccinylase, ...
Authors:Nocek, B.
Deposit date:2017-05-01
Release date:2018-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural Evidence of a Major Conformational Change Triggered by Substrate Binding in DapE Enzymes: Impact on the Catalytic Mechanism.
Biochemistry, 57, 2018
3UKJ
DownloadVisualize
BU of 3ukj by Molmil
Crystal structure of extracellular ligand-binding receptor from Rhodopseudomonas palustris HaA2
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, Extracellular ligand-binding receptor, GLYCEROL, ...
Authors:Chang, C, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-11-09
Release date:2011-11-23
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
8D5H
DownloadVisualize
BU of 8d5h by Molmil
Crystal structure of dihydropteroate synthase (folP-SMZ_B27) from soil uncultured bacterium in complex with 6-hydroxymethyl-7,8-dihydropterin
Descriptor: 6-HYDROXYMETHYLPTERIN, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Stogios, P.J, Skarina, T, Osipiuk, J, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-06-04
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of dihydropteroate synthase (folP-SMZ_B27) from soil uncultured bacterium in complex with 6-hydroxymethyl-7,8-dihydropterin
To Be Published
4MHD
DownloadVisualize
BU of 4mhd by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with spermidine
Descriptor: SPERMIDINE, Spermidine n1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-29
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4MI4
DownloadVisualize
BU of 4mi4 by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with spermine
Descriptor: SPERMINE, Spermidine n1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-30
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4EYQ
DownloadVisualize
BU of 4eyq by Molmil
Crystal structure of solute binding protein of ABC transporter from Rhodopseudomonas palustris HaA2 in complex with caffeic acid/3-(4-HYDROXY-PHENYL)PYRUVIC ACID
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, CAFFEIC ACID, Extracellular ligand-binding receptor
Authors:Chang, C, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-01
Release date:2012-05-30
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4EYO
DownloadVisualize
BU of 4eyo by Molmil
Crystal structure of solute binding protein of ABC transporter from Rhodopseudomonas palustris HaA2 in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, Extracellular ligand-binding receptor
Authors:Chang, C, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-01
Release date:2012-05-30
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4I1D
DownloadVisualize
BU of 4i1d by Molmil
The crystal structure of an ABC transporter substrate-binding protein from Bradyrhizobium japonicum USDA 110
Descriptor: ABC transporter substrate-binding protein, ACETATE ION, D-MALATE, ...
Authors:Fan, Y, Tan, K, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-20
Release date:2012-12-05
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
3SG0
DownloadVisualize
BU of 3sg0 by Molmil
The crystal structure of an extracellular ligand-binding receptor from Rhodopseudomonas palustris HaA2
Descriptor: BENZOYL-FORMIC ACID, Extracellular ligand-binding receptor
Authors:Tan, K, Mack, J.C, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-06-14
Release date:2011-06-29
Last modified:2015-10-14
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-coumaric acid and related aromatic acids.
Proteins, 81, 2013
3TX6
DownloadVisualize
BU of 3tx6 by Molmil
The Structure of a putative ABC-transporter periplasmic component from Rhodopseudomonas palustris
Descriptor: 1,2-ETHANEDIOL, 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, ACETIC ACID, ...
Authors:Cuff, M.E, Mack, J.C, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-09-22
Release date:2011-11-09
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4F8J
DownloadVisualize
BU of 4f8j by Molmil
The structure of an aromatic compound transport protein from Rhodopseudomonas palustris in complex with p-coumarate
Descriptor: 4'-HYDROXYCINNAMIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Cuff, M.E, Mack, J.C, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-17
Release date:2012-09-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4FB4
DownloadVisualize
BU of 4fb4 by Molmil
The Structure of an ABC-Transporter Family Protein from Rhodopseudomonas palustris in Complex with Caffeic Acid
Descriptor: CAFFEIC ACID, GLYCEROL, Putative branched-chain amino acid transport system substrate-binding protein
Authors:Cuff, M.E, Mack, J.C, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-22
Release date:2012-09-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4HFV
DownloadVisualize
BU of 4hfv by Molmil
Crystal structure of lpg1851 protein from Legionella pneumophila (putative T4SS effector)
Descriptor: CITRIC ACID, SUCCINIC ACID, Uncharacterized protein
Authors:Michalska, K, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-10-05
Release date:2012-11-07
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
7UUN
DownloadVisualize
BU of 7uun by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with neomycin
Descriptor: 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, NEOMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Osipiuk, J, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance.
Nat.Chem.Biol., 20, 2024
7UUM
DownloadVisualize
BU of 7uum by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with paromomycin and coenzyme A
Descriptor: Aminocyclitol acetyltransferase ApmA, COENZYME A, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance.
Nat.Chem.Biol., 20, 2024
7UUJ
DownloadVisualize
BU of 7uuj by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with gentamicin
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, ...
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of aminoglycoside resistance enzyme ApmA, complex with gentamicin
To Be Published

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon