3D79
 
 | | Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3 | | 分子名称: | Putative uncharacterized protein PH0734 | | 著者 | Nishimura, Y, Miyazono, K, Sawano, Y, Makino, T, Nagata, K, Tanokura, M. | | 登録日 | 2008-05-20 | | 公開日 | 2008-12-09 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.73 Å) | | 主引用文献 | Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 73, 2008
|
|
1VFC
 | |
1VF9
 | | Solution Structure Of Human Trf2 | | 分子名称: | Telomeric repeat binding factor 2 | | 著者 | Nishimura, Y, Hanaoka, S. | | 登録日 | 2004-04-12 | | 公開日 | 2005-05-17 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison between TRF2 and TRF1 of their telomeric DNA-bound structures and DNA-binding activities
Protein Sci., 14, 2005
|
|
1BHI
 | | STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 STRUCTURES | | 分子名称: | CRE-BP1 | | 著者 | Nagadoi, A, Nakazawa, K, Uda, H, Maekawa, T, Ishii, S, Nishimura, Y. | | 登録日 | 1998-06-09 | | 公開日 | 1999-06-15 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the transactivation domain of ATF-2 comprising a zinc finger-like subdomain and a flexible subdomain.
J.Mol.Biol., 287, 1999
|
|
1BA5
 | | DNA-BINDING DOMAIN OF HUMAN TELOMERIC PROTEIN, HTRF1, NMR, 18 STRUCTURES | | 分子名称: | HTRF1 | | 著者 | Nishikawa, T, Nagadoi, A, Yoshimura, S, Aimoto, S, Nishimura, Y. | | 登録日 | 1998-04-22 | | 公開日 | 1999-04-27 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the DNA-binding domain of human telomeric protein, hTRF1.
Structure, 6, 1998
|
|
3J3Z
 | | Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment | | 分子名称: | MA28-7 neutralizing antibody heavy chain, MA28-7 neutralizing antibody light chain | | 著者 | Lee, H, Cifuente, J.O, Ashley, R.E, Conway, J.F, Makhov, A.M, Tano, Y, Shimizu, H, Nishimura, Y, Hafenstein, S. | | 登録日 | 2013-05-21 | | 公開日 | 2013-08-28 | | 最終更新日 | 2018-07-18 | | 実験手法 | ELECTRON MICROSCOPY (23.4 Å) | | 主引用文献 | A strain-specific epitope of enterovirus 71 identified by cryo-electron microscopy of the complex with fab from neutralizing antibody.
J.Virol., 87, 2013
|
|
1D8K
 | | SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA | | 分子名称: | GENERAL TRANSCRIPTION FACTOR TFIIE-BETA | | 著者 | Okuda, M, Watanabe, Y, Okamura, H, Hanaoka, F, Ohkuma, Y, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 1999-10-25 | | 公開日 | 2000-04-26 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of the central core domain of TFIIEbeta with a novel double-stranded DNA-binding surface.
EMBO J., 19, 2000
|
|
1D8J
 | | SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA | | 分子名称: | GENERAL TRANSCRIPTION FACTOR TFIIE-BETA | | 著者 | Okuda, M, Watanabe, Y, Okamura, H, Hanaoka, F, Ohkuma, Y, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 1999-10-25 | | 公開日 | 2000-04-26 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of the central core domain of TFIIEbeta with a novel double-stranded DNA-binding surface.
EMBO J., 19, 2000
|
|
8I53
 | |
1MSF
 | | SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES | | 分子名称: | C-Myb DNA-Binding Domain, DNA (5'-D(*AP*TP*GP*TP*GP*TP*GP*TP*CP*AP*GP*TP*TP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*AP*AP*CP*TP*GP*AP*CP*AP*CP*AP*CP*AP*T)-3') | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Sekikawa, A, Inoue, T, Kanai, H, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-01-24 | | 公開日 | 1995-03-31 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.
Cell(Cambridge,Mass.), 79, 1994
|
|
1MSE
 | | SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES | | 分子名称: | C-Myb DNA-Binding Domain, DNA (5'-D(*AP*TP*GP*TP*GP*TP*GP*TP*CP*AP*GP*TP*TP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*AP*AP*CP*TP*GP*AP*CP*AP*CP*AP*CP*AP*T)-3') | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Sekikawa, A, Inoue, T, Kanai, H, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-01-24 | | 公開日 | 1995-03-31 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.
Cell(Cambridge,Mass.), 79, 1994
|
|
1MBH
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2 | | 分子名称: | C-MYB | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-09-15 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
1MBK
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 | | 分子名称: | MYB PROTO-ONCOGENE PROTEIN | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-07-31 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
1MBF
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1 | | 分子名称: | MYB PROTO-ONCOGENE PROTEIN | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-07-31 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
1MBE
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1 | | 分子名称: | MYB PROTO-ONCOGENE PROTEIN | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-07-31 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
1MBJ
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 | | 分子名称: | MYB PROTO-ONCOGENE PROTEIN | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-07-31 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
1MBG
 | | MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2 | | 分子名称: | MYB PROTO-ONCOGENE PROTEIN | | 著者 | Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. | | 登録日 | 1995-05-19 | | 公開日 | 1995-07-31 | | 最終更新日 | 2012-02-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
|
|
2Z33
 | | Solution structure of the DNA complex of PhoB DNA-binding/transactivation Domain | | 分子名称: | 5'-D(*AP*CP*AP*GP*AP*TP*TP*TP*AP*TP*GP*AP*CP*AP*GP*T)-3', 5'-D(*AP*CP*TP*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*TP*GP*T)-3', Phosphate regulon transcriptional regulatory protein phoB | | 著者 | Yamane, T, Okamura, H, Ikeguchi, M, Nishimura, Y, Kidera, A. | | 登録日 | 2007-05-31 | | 公開日 | 2008-04-22 | | 最終更新日 | 2022-03-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment.
Proteins, 71, 2008
|
|
1PRV
 | | PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING | | 分子名称: | PURINE REPRESSOR | | 著者 | Nagadoi, A, Morikawa, S, Nakamura, H, Enari, M, Kobayashi, K, Yamamoto, H, Sampei, G, Mizobuchi, K, Schumacher, M.A, Brennan, R.G, Nishimura, Y. | | 登録日 | 1995-05-08 | | 公開日 | 1996-03-08 | | 最終更新日 | 2012-02-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
|
|
1PRU
 | | PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING | | 分子名称: | PURINE REPRESSOR | | 著者 | Nagadoi, A, Morikawa, S, Nakamura, H, Enari, M, Kobayashi, K, Yamamoto, H, Sampei, G, Mizobuchi, K, Schumacher, M.A, Brennan, R.G, Nishimura, Y. | | 登録日 | 1995-05-08 | | 公開日 | 1996-03-08 | | 最終更新日 | 2012-02-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
|
|
1QQI
 | | SOLUTION STRUCTURE OF THE DNA-BINDING AND TRANSACTIVATION DOMAIN OF PHOB FROM ESCHERICHIA COLI | | 分子名称: | PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB | | 著者 | Okamura, H, Hanaoka, S, Nagadoi, A, Makino, K, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 1999-06-07 | | 公開日 | 2000-06-07 | | 最終更新日 | 2022-03-02 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box.
J.Mol.Biol., 295, 2000
|
|
7DTI
 | |
1VD4
 | | Solution structure of the zinc finger domain of TFIIE alpha | | 分子名称: | Transcription initiation factor IIE, alpha subunit, ZINC ION | | 著者 | Okuda, M, Tanaka, A, Arai, Y, Satoh, M, Okamura, H, Nagadoi, A, Hanaoka, F, Ohkuma, Y, Nishimura, Y. | | 登録日 | 2004-03-18 | | 公開日 | 2004-10-05 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | A novel zinc finger structure in the large subunit of human general transcription factor TFIIE.
J.Biol.Chem., 279, 2004
|
|
1FEX
 | |
7BWI
 | | Solution structure of recombinant APETx1 | | 分子名称: | Kappa-actitoxin-Ael2a | | 著者 | Matsumura, K, Kobayashi, N, Kurita, J, Nishimura, Y, Yokogawa, M, Imai, S, Shimada, I, Osawa, M. | | 登録日 | 2020-04-14 | | 公開日 | 2020-12-23 | | 最終更新日 | 2021-07-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization.
Bmc Mol Cell Biol, 22, 2021
|
|
