Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5MWU
DownloadVisualize
BU of 5mwu by Molmil
Crystal structure of the periplasmic nickel-binding protein NikA from Escherichia coli in complex with Ru(bpza)(CO)2Cl
分子名称: ACETATE ION, CARBON MONOXIDE, CHLORIDE ION, ...
著者Cavazza, C, Lopez, S, Rondot, L, Iannello, M, Boeri-Erba, E, Burzlaff, N, Strinitz, F, Jorge-Robin, A, Marchi-Delapierre, C, Menage, S.
登録日2017-01-20
公開日2017-02-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Efficient conversion of alkenes to chlorohydrins by a Ru-based artificial enzyme
To Be Published
5MQJ
DownloadVisualize
BU of 5mqj by Molmil
Crystal structure of dCK mutant C3S
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Deoxycytidine kinase, MAGNESIUM ION, ...
著者Saez-Ayala, M, Rebuffet, E, Hammam, K, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
登録日2016-12-20
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
5MQL
DownloadVisualize
BU of 5mql by Molmil
Crystal structure of dCK mutant C3S in complex with masitinib and UDP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Deoxycytidine kinase, MAGNESIUM ION, ...
著者Rebuffet, E, Hammam, K, Saez-Ayala, M, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
登録日2016-12-20
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
5MQT
DownloadVisualize
BU of 5mqt by Molmil
Crystal structure of dCK mutant C3S in complex with imatinib and UDP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, Deoxycytidine kinase, ...
著者Saez-Ayala, M, Rebuffet, E, Hammam, K, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
登録日2016-12-20
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
3PEL
DownloadVisualize
BU of 3pel by Molmil
Structure of Greyhound Hemoglobin: Origin of High Oxygen Affinity
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Bhatt, V.S, Zaldivar-Lopez, S, Harris, D.R, Couto, C.G, Wang, P.G, Palmer, A.F.
登録日2010-10-26
公開日2010-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Greyhound hemoglobin: origin of high oxygen affinity.
Acta Crystallogr.,Sect.D, 67, 2011
5L8D
DownloadVisualize
BU of 5l8d by Molmil
X-ray structure of NikA from Escherichia coli in complex with Ru(bis(pyrzol-1-yl)acetate scorpionate)(CO)2Cl
分子名称: ACETATE ION, CARBON MONOXIDE, CHLORIDE ION, ...
著者Menage, S, Cavazza, C.
登録日2016-06-07
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Efficient conversion of alkenes to chlorohydrins by a Ru-based artificial enzyme.
Chem. Commun. (Camb.), 53, 2017
7A0C
DownloadVisualize
BU of 7a0c by Molmil
X-ray structure of NikA from Escherichia coli in complex with Fe-6-Me2-BPMCN
分子名称: 2-[[(1~{S},2~{S})-2-[methyl-[(6-methylpyridin-2-yl)methyl]amino]cyclohexyl]-[(6-methylpyridin-2-yl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Cavazza, C, Menage, S.
登録日2020-08-07
公開日2020-11-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Selective Sulfide Oxidation Catalyzed by Heterogeneous Artificial Metalloenzymes Iron@NikA.
Chemistry, 26, 2020
5ON4
DownloadVisualize
BU of 5on4 by Molmil
Crystal structure of NikA in complex with Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
分子名称: 2-[2-[[2,3-bis(oxidanyl)phenyl]methyl-(2-hydroxy-2-oxoethyl)amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, FE (III) ION, GLYCEROL, ...
著者Cavazza, C, Menage, S.
登録日2017-08-02
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
5ON5
DownloadVisualize
BU of 5on5 by Molmil
Crystal structure of NikA in complex with Fe-L2 (Fe-L2 (N-(2-hydroxy-3-methoxybenzyl)-N'-(2-thiomethylbenzyl)- N,N'-ethylenediamine diacetic acid) after dioxygen oxidation
分子名称: 2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Cavazza, C, Menage, S.
登録日2017-08-02
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
5ON8
DownloadVisualize
BU of 5on8 by Molmil
Crystal structure of NikA in complex with reduced Fe-L2 (N-(2-hydroxy-3-methoxybenzyl)-N'-(2-thiomethylbenzyl)- N,N'-ethylenediamine diacetic acid)
分子名称: 2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Cavazza, C, Menage, S.
登録日2017-08-03
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
5ON9
DownloadVisualize
BU of 5on9 by Molmil
Crystal structure of NikA in complex with reduced Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, ACETATE ION, ...
著者Cavazza, C, Menage, S.
登録日2017-08-03
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
5ON1
DownloadVisualize
BU of 5on1 by Molmil
Crystal structure of NikA in complex with hydroxylated Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
分子名称: 2-[2-[[2,3-bis(oxidanyl)phenyl]methyl-(2-hydroxy-2-oxoethyl)amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Cavazza, C, Menage, S.
登録日2017-08-02
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
5ON0
DownloadVisualize
BU of 5on0 by Molmil
Crystal structure of NikA in complex with Fe-L2 (N-(2-hydroxy-3methoxybenzyl)-N-N'-ethylenediaminediacetic acid)
分子名称: 2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Cavazza, C, Menage, S.
登録日2017-08-02
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cross-Linked Artificial Enzyme Crystals as Heterogeneous Catalysts for Oxidation Reactions.
J. Am. Chem. Soc., 139, 2017
7RK1
DownloadVisualize
BU of 7rk1 by Molmil
Crystal structure of the human astrovirus serotype 8 capsid spike in complex with scFv 3E8, an astrovirus-neutralizing antibody, at 2.05-A resolution
分子名称: Capsid polyprotein VP70, scFv 3E8
著者Meyer, L, DuBois, R.M.
登録日2021-07-21
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of Two Human Astrovirus Capsid/Neutralizing Antibody Complexes Reveal Distinct Epitopes and Inhibition of Virus Attachment to Cells.
J.Virol., 96, 2022
7RK2
DownloadVisualize
BU of 7rk2 by Molmil
Crystal structure of the human astrovirus serotype 8 capsid spike in complex with scFv 2D9, an astrovirus-neutralizing antibody, at 2.65-A resolution
分子名称: Capsid protein VP25, scFv 2D9
著者Meyer, L, Cuellar, C, DuBois, R.M.
登録日2021-07-21
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structures of Two Human Astrovirus Capsid/Neutralizing Antibody Complexes Reveal Distinct Epitopes and Inhibition of Virus Attachment to Cells.
J.Virol., 96, 2022
2BMV
DownloadVisualize
BU of 2bmv by Molmil
Apoflavodoxin from Helicobacter pylori
分子名称: BENZAMIDINE, CHLORIDE ION, FLAVODOXIN
著者Martinez-Julvez, M, Hermoso, J.A, Sancho, J, Perez-Dorado, I, Cremades, N, Bueno, M.
登録日2005-03-16
公開日2006-06-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Common Conformational Changes in Flavodoxins Induced by Fmn and Anion Binding: The Structure of Helicobacter Pylori Apoflavodoxin.
Proteins, 69, 2007
2W5U
DownloadVisualize
BU of 2w5u by Molmil
Flavodoxin from Helicobacter pylori in complex with the C3 inhibitor
分子名称: FLAVIN MONONUCLEOTIDE, Flavodoxin, [2-(5-amino-4-cyano-1H-pyrazol-1-yl)-5-(trifluoromethyl)phenyl](hydroxy)oxoammonium
著者Cremades, N, Perez-Dorado, I, Hermoso, J.A, Martinez-Julvez, M, Sancho, J.
登録日2008-12-12
公開日2009-12-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Discovery of Specific Flavodoxin Inhibitors as Potential Therapeutic Agents Against Helicobacter Pylori Infection.
Acs Chem.Biol., 4, 2009

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon