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7QQ3
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BU of 7qq3 by Molmil
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2022-01-06
Release date:2023-01-18
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:The Myxobacterial Antibiotic Myxovalargin: Biosynthesis, Structural Revision, Total Synthesis, and Molecular Characterization of Ribosomal Inhibition.
J.Am.Chem.Soc., 145, 2023
9FBV
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BU of 9fbv by Molmil
70S Escherichia coli ribosome with P-site initiatior tRNA.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ...
Authors:Koller, T.O, Wilson, D.N.
Deposit date:2024-05-14
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Biorxiv, 2024
8R8M
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BU of 8r8m by Molmil
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ...
Authors:Koller, T.O, Wilson, D.N.
Deposit date:2023-11-29
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Biorxiv, 2024
8R6C
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BU of 8r6c by Molmil
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ...
Authors:Koller, T.O, Wilson, D.N.
Deposit date:2023-11-22
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Biorxiv, 2024
8A63
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BU of 8a63 by Molmil
Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.
Descriptor: 1,4-DIAMINOBUTANE, 23S ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Koller, T.O, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2022-06-16
Release date:2022-11-02
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes.
Nucleic Acids Res., 50, 2022
8A5I
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BU of 8a5i by Molmil
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Descriptor: 1,4-DIAMINOBUTANE, 23S ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Koller, T.O, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2022-06-15
Release date:2022-11-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes.
Nucleic Acids Res., 50, 2022
8A57
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BU of 8a57 by Molmil
Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Descriptor: 1,4-DIAMINOBUTANE, 23S ribosomal RNA, 50S ribosomal protein L11, ...
Authors:Koller, T.O, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2022-06-14
Release date:2022-11-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes.
Nucleic Acids Res., 50, 2022
8AKN
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BU of 8akn by Molmil
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
Descriptor: 16S ribosomal RNA, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 23S ribosomal RNA, ...
Authors:Koller, T.O, Morici, M, Wilson, D.N.
Deposit date:2022-07-30
Release date:2023-03-08
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural basis for translation inhibition by the glycosylated drosocin peptide.
Nat.Chem.Biol., 19, 2023
8ANA
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BU of 8ana by Molmil
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 23S ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Koller, T.O, Morici, M, Wilson, D.N.
Deposit date:2022-08-05
Release date:2023-03-08
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Structural basis for translation inhibition by the glycosylated drosocin peptide.
Nat.Chem.Biol., 19, 2023
8AM9
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BU of 8am9 by Molmil
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
Descriptor: 16S ribosomal RNA, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 23S ribosomal RNA, ...
Authors:Koller, T.O, Morici, M, Wilson, D.N.
Deposit date:2022-08-03
Release date:2023-03-08
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for translation inhibition by the glycosylated drosocin peptide.
Nat.Chem.Biol., 19, 2023
8B7Y
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BU of 8b7y by Molmil
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Koller, T.O, Graf, M, Wilson, D.N.
Deposit date:2022-10-03
Release date:2023-01-25
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Myxobacterial Antibiotic Myxovalargin: Biosynthesis, Structural Revision, Total Synthesis, and Molecular Characterization of Ribosomal Inhibition.
J.Am.Chem.Soc., 145, 2023
7AZY
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BU of 7azy by Molmil
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Koller, T.O, Wilson, D.N.
Deposit date:2020-11-17
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.877 Å)
Cite:Context-specific action of macrolide antibiotics on the eukaryotic ribosome.
Nat Commun, 12, 2021
7OTC
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BU of 7otc by Molmil
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Wieland, M, Koller, T.O, Wilson, D.N.
Deposit date:2021-06-10
Release date:2022-05-11
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UG7
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BU of 7ug7 by Molmil
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Rundlet, E.J, Wieland, M, Holm, M, Koller, T.O, Blanchard, S.C, Wilson, D.N.
Deposit date:2022-03-24
Release date:2022-05-18
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CF8
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BU of 8cf8 by Molmil
Eravacycline bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-03
Release date:2023-08-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGD
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BU of 8cgd by Molmil
Clindamycin bound to the 50S subunit
Descriptor: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-03
Release date:2023-07-26
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGR
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BU of 8cgr by Molmil
Apramycin bound to the 30S body
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-06
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.12 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CAM
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BU of 8cam by Molmil
Evernimicin bound to the 50S subunit
Descriptor: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-07-26
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.86 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CA7
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BU of 8ca7 by Molmil
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Descriptor: 16S rRNA, 30S ribosomal protein S7, MAGNESIUM ION, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-08-02
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.06 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGV
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BU of 8cgv by Molmil
Tiamulin bound to the 50S subunit
Descriptor: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N.
Deposit date:2023-02-06
Release date:2023-08-02
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.66 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CEP
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BU of 8cep by Molmil
Kasugamycin bound to the 30S body
Descriptor: (1S,2R,3S,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL 2-AMINO-4-{[CARBOXY(IMINO)METHYL]AMINO}-2,3,4,6-TETRADEOXY-ALPHA-D-ARABINO-HEXOPYRANOSIDE, 16S rRNA, 23S rRNA, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-02-02
Release date:2023-07-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CAI
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BU of 8cai by Molmil
Streptomycin and Hygromycin B bound to the 30S body
Descriptor: 16S rRNA, 30S ribosomal protein S16, 30S ribosomal protein S2, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.08 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CAZ
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BU of 8caz by Molmil
empty 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-07-26
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGI
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BU of 8cgi by Molmil
Pentacycline TP038 bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S7, Large ribosomal subunit protein bL31A, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N.
Deposit date:2023-02-04
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (1.89 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGK
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BU of 8cgk by Molmil
Lincomycin and Avilamycin bound to the 50S subunit
Descriptor: (2R,3S,4R,6S)-4-hydroxy-6-{[(2R,3aR,4R,4'R,5'S,6S,6'R,7aR)-4'-hydroxy-6-{[(2S,3R,4R,5S,6R)-3-hydroxy-2-{[(2R,3S,4S,5S,6S)-4-hydroxy-6-({(2R,3aS,3a'R,6S,6'R,7R,7'R,7aR,7a'R)-7'-hydroxy-7'-[(1S)-1-hydroxyethyl]-6'-methyl-7-[(2-methylpropanoyl)oxy]octahydro-4H-2,4'-spirobi[[1,3]dioxolo[4,5-c]pyran]-6-yl}oxy)-5-methoxy-2-(methoxymethyl)tetrahydro-2H-pyran-3-yl]oxy}-5-methoxy-6-methyltetrahydro-2H-pyran-4-yl]oxy}-4,6',7a-trimethyloctahydro-4H-spiro[1,3-dioxolo[4,5-c]pyran-2,2'-pyran]-5'-yl]oxy}-2-methyltetrahydro-2H-pyran-3-yl 3,5-dichloro-4-hydroxy-2-methoxy-6-methylbenzoate (non-preferred name), 23S rRNA, 50S ribosomal protein L15, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Beckert, B, Wilson, D.N.
Deposit date:2023-02-05
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.64 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023

 

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