1WW1
| |
1UDN
| Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus | 分子名称: | PHOSPHATE ION, Ribonuclease PH, SULFATE ION | 著者 | Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-05-02 | 公開日 | 2003-09-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus J.Biol.Chem., 278, 2003
|
|
1UDQ
| Crystal structure of the tRNA processing enzyme RNase PH T125A mutant from Aquifex aeolicus | 分子名称: | PHOSPHATE ION, Ribonuclease PH, SULFATE ION | 著者 | Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-05-02 | 公開日 | 2003-09-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus J.Biol.Chem., 278, 2003
|
|
1UDO
| Crystal structure of the tRNA processing enzyme RNase PH R86A mutant from Aquifex aeolicus | 分子名称: | PHOSPHATE ION, Ribonuclease PH, SULFATE ION | 著者 | Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-05-02 | 公開日 | 2003-09-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus J.Biol.Chem., 278, 2003
|
|
1UDS
| Crystal structure of the tRNA processing enzyme RNase PH R126A mutant from Aquifex aeolicus | 分子名称: | PHOSPHATE ION, Ribonuclease PH, SULFATE ION | 著者 | Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-05-02 | 公開日 | 2003-09-23 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus J.Biol.Chem., 278, 2003
|
|
2E7Y
| High resolution structure of T. maritima tRNase Z | 分子名称: | S-1,2-PROPANEDIOL, SULFATE ION, ZINC ION, ... | 著者 | Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-01-15 | 公開日 | 2007-09-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.97 Å) | 主引用文献 | The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes Acta Crystallogr.,Sect.F, 63, 2007
|
|
2YVU
| |
2YVT
| |
5B83
| |
3W1W
| Protein-drug complex | 分子名称: | 1,2-ETHANEDIOL, 2-HYDROXYBENZOIC ACID, CHOLIC ACID, ... | 著者 | Ishii, R, Gupta, V, Yamaguchi, Y, Handa, H, Nureki, O. | 登録日 | 2012-11-21 | 公開日 | 2013-10-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.006 Å) | 主引用文献 | Salicylic Acid induces mitochondrial injury by inhibiting ferrochelatase heme biosynthesis activity Mol.Pharmacol., 84, 2013
|
|
4MKP
| Crystal structure of human cGAS apo form | 分子名称: | Cyclic GMP-AMP synthase, ZINC ION | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2013-09-05 | 公開日 | 2013-10-30 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.953 Å) | 主引用文献 | Structural and Functional Analyses of DNA-Sensing and Immune Activation by Human cGAS Plos One, 8, 2013
|
|
3GH5
| Crystal structure of beta-hexosaminidase from Paenibacillus sp. TS12 in complex with GlcNAc | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, beta-hexosaminidase | 著者 | Sumida, T, Ishii, R, Yanagisawa, T, Yokoyama, S, Ito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2009-03-03 | 公開日 | 2009-07-07 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Molecular cloning and crystal structural analysis of a novel beta-N-acetylhexosaminidase from Paenibacillus sp. TS12 capable of degrading glycosphingolipids J.Mol.Biol., 392, 2009
|
|
4PDN
| Crystal structure of E. coli YfcM | 分子名称: | MAGNESIUM ION, Uncharacterized protein | 著者 | Kobayashi, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2014-04-19 | 公開日 | 2015-03-04 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.448 Å) | 主引用文献 | The non-canonical hydroxylase structure of YfcM reveals a metal ion-coordination motif required for EF-P hydroxylation. Nucleic Acids Res., 42, 2014
|
|
1WWR
| Crystal structure of tRNA adenosine deaminase TadA from Aquifex aeolicus | 分子名称: | ZINC ION, tRNA adenosine deaminase TadA | 著者 | Kuratani, M, Ishii, R, Bessho, Y, Fukunaga, R, Sengoku, T, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-01-12 | 公開日 | 2005-02-01 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal Structure of tRNA Adenosine Deaminase (TadA) from Aquifex aeolicus J.Biol.Chem., 280, 2005
|
|
5GVS
| Crystal structure of the DDX41 DEAD domain in an apo open form | 分子名称: | Probable ATP-dependent RNA helicase DDX41 | 著者 | Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. | 登録日 | 2016-09-06 | 公開日 | 2016-10-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
|
|
5GVR
| Crystal structure of the DDX41 DEAD domain in an apo closed form | 分子名称: | (2S)-2-hydroxybutanedioic acid, Probable ATP-dependent RNA helicase DDX41 | 著者 | Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. | 登録日 | 2016-09-06 | 公開日 | 2016-10-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
|
|
4XJ6
| Crystal structure of Escherichia coli DncV 3'-deoxy GTP bound form | 分子名称: | 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, VC0179-like protein | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2015-01-08 | 公開日 | 2015-04-29 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.31 Å) | 主引用文献 | Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
|
|
4XJ3
| Crystal structure of Vibrio cholerae DncV GTP bound form | 分子名称: | 1,2-ETHANEDIOL, Cyclic AMP-GMP synthase, GUANOSINE-5'-TRIPHOSPHATE, ... | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2015-01-08 | 公開日 | 2015-04-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
|
|
4XJ1
| Crystal structure of Vibrio cholerae DncV apo form | 分子名称: | 1,2-ETHANEDIOL, Cyclic AMP-GMP synthase | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2015-01-08 | 公開日 | 2015-04-29 | 最終更新日 | 2020-02-05 | 実験手法 | X-RAY DIFFRACTION (1.77 Å) | 主引用文献 | Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
|
|
4XJ4
| Crystal structure of Vibrio cholerae DncV 3'-deoxy ATP bound form | 分子名称: | 1,2-ETHANEDIOL, 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-GMP synthase, ... | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2015-01-08 | 公開日 | 2015-04-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.596 Å) | 主引用文献 | Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
|
|
4XJ5
| Crystal structure of Vibrio cholerae DncV 3'-deoxy GTP bound form | 分子名称: | 1,2-ETHANEDIOL, 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, Cyclic AMP-GMP synthase, ... | 著者 | Kato, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2015-01-08 | 公開日 | 2015-04-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.552 Å) | 主引用文献 | Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
|
|
6IJF
| Crystal structure of the type VI effector-immunity complex (Tae4-Tai4) from Agrobacterium tumefaciens | 分子名称: | PENTAETHYLENE GLYCOL, SULFATE ION, Tae4, ... | 著者 | Fukuhara, S, Nakane, T, Yamashita, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2018-10-09 | 公開日 | 2018-12-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex. Acta Crystallogr F Struct Biol Commun, 74, 2018
|
|
6IJE
| Crystal structure of the type VI amidase immunity (Tai4) from Agrobacterium tumefaciens | 分子名称: | 1,2-ETHANEDIOL, Tai4 | 著者 | Fukuhara, S, Nakane, T, Yamashita, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2018-10-09 | 公開日 | 2018-12-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex. Acta Crystallogr F Struct Biol Commun, 74, 2018
|
|
3VQV
| Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AMPPNP (re-refined) | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Pyrrolysine--tRNA ligase | 著者 | Yanagisawa, T, Sumida, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2012-04-01 | 公開日 | 2013-01-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site Acta Crystallogr.,Sect.D, 69, 2013
|
|
1ULH
| A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase | 分子名称: | Tryptophanyl-tRNA synthetase | 著者 | Kise, Y, Sengoku, T, Ishii, R, Yokoyama, S, Park, S.G, Lee, S.W, Kim, S, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-09-12 | 公開日 | 2004-02-03 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.31 Å) | 主引用文献 | A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase Nat.Struct.Mol.Biol., 11, 2004
|
|