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7DGU
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BU of 7dgu by Molmil
De novo designed protein H4A1R
Descriptor: de novo designed protein H4A1R
Authors:Xu, Y, Liao, S, Chen, Q, Liu, H.
Deposit date:2020-11-12
Release date:2021-11-24
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DGW
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BU of 7dgw by Molmil
De novo designed protein H4A2S
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, de novo designed protein H4A2S
Authors:Xu, Y, Liao, S, Chen, Q, Liu, H.
Deposit date:2020-11-12
Release date:2021-11-24
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DKO
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BU of 7dko by Molmil
De novo design protein AM2M
Descriptor: de novo designed protein AM2M
Authors:Bin, H.
Deposit date:2020-11-25
Release date:2021-12-08
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DMF
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BU of 7dmf by Molmil
A de novo protein that rigidly extends the structure of tVHS-like domain in tepsin with a new designed domain
Descriptor: Designed protein EXTD-3
Authors:Xu, Y.
Deposit date:2020-12-03
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DKK
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BU of 7dkk by Molmil
De novo design protein XM2H
Descriptor: De novo design protein XM2H
Authors:Bin, H.
Deposit date:2020-11-24
Release date:2021-12-08
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DGY
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BU of 7dgy by Molmil
De novo designed protein H4C2R
Descriptor: de novo designed protein H4C2R
Authors:Xu, Y, Liao, S, Chen, Q, Liu, H.
Deposit date:2020-11-12
Release date:2021-12-15
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
3ENS
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BU of 3ens by Molmil
Crystal structure of human FXA in complex with methyl (2Z)-3-[(3-chloro-1H-indol-7-yl)amino]-2-cyano-3-{[(3S)-2-oxo-1-(2-oxo-2-pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, Activated factor Xa heavy chain, ...
Authors:Klei, H.E.
Deposit date:2008-09-25
Release date:2008-12-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, Structure-Activity Relationships, X-ray Crystal Structure, and Energetic Contributions of a Critical P1 Pharmacophore: 3-Chloroindole-7-yl-Based Factor Xa Inhibitors.
J.Med.Chem., 51, 2008
8HME
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BU of 8hme by Molmil
head module state 1 of Tetrahymena IFT-A
Descriptor: Intraflagellar transport protein 122 homolog, Intraflagellar transporter, WD40 repeat protein, ...
Authors:Ma, Y, Wu, J, Lei, M.
Deposit date:2022-12-03
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insight into the intraflagellar transport complex IFT-A and its assembly in the anterograde IFT train.
Nat Commun, 14, 2023
8HMF
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BU of 8hmf by Molmil
head module state 2 of Tetrahymena IFT-A
Descriptor: Intraflagellar transport protein 122 homolog, Intraflagellar transporter, WD40 repeat protein, ...
Authors:Ma, Y, Wu, J, Lei, M.
Deposit date:2022-12-03
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural insight into the intraflagellar transport complex IFT-A and its assembly in the anterograde IFT train.
Nat Commun, 14, 2023
8HMD
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BU of 8hmd by Molmil
base module state 2 of Tetrahymena IFT-A
Descriptor: Intraflagellar transport protein 122 homolog, Intraflagellar transport protein 43 homolog, Tetratricopeptide repeat protein, ...
Authors:Ma, Y, Wu, J, Lei, M.
Deposit date:2022-12-03
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural insight into the intraflagellar transport complex IFT-A and its assembly in the anterograde IFT train.
Nat Commun, 14, 2023
8HMC
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BU of 8hmc by Molmil
base module state 1 of Tetrahymena IFT-A
Descriptor: Intraflagellar transport protein 122 homolog, Intraflagellar transport protein 43 homolog, Tetratricopeptide repeat protein, ...
Authors:Ma, Y, Wu, J, Lei, M.
Deposit date:2022-12-03
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insight into the intraflagellar transport complex IFT-A and its assembly in the anterograde IFT train.
Nat Commun, 14, 2023
7C7P
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BU of 7c7p by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Telaprevir
Descriptor: (1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyrazin-2-ylcarbonyl)amino]acetyl}amino)-3,3-dimethylbutanoyl]-N-[(2R,3S)-1-(cyclopropylamino)-2-hydroxy-1-oxohexan-3-yl]octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase, CHLORIDE ION
Authors:Zeng, R, Qiao, J.X, Wang, Y.F, Li, Y.S, Yao, R, Yang, S.Y, Lei, J.
Deposit date:2020-05-26
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
7COM
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BU of 7com by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Boceprevir (space group P212121)
Descriptor: 3C-like proteinase, boceprevir (bound form)
Authors:Zeng, R, Qiao, J.X, Wang, Y.F, Li, Y.S, Yao, R, Liu, J.M, Zhou, Y.L, Chen, P, Yang, S.Y, Lei, J.
Deposit date:2020-08-04
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
7D3I
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BU of 7d3i by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with MI-23
Descriptor: (3~{S},3~{a}~{S},6~{a}~{R})-2-[3-[3,5-bis(fluoranyl)phenyl]propanoyl]-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamide, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase
Authors:Zeng, R, Li, Y.S, Qiao, J.X, Wang, Y.F, Yang, S.Y, Lei, J.
Deposit date:2020-09-19
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
8JBJ
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BU of 8jbj by Molmil
Crystal structure of anti-PVRIG Fab
Descriptor: antibody heavy chain, antibody light chain
Authors:Sun, J, Li, X.L, Song, J.
Deposit date:2023-05-09
Release date:2023-06-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Identification and characterization of an unexpected isomerization motif in CDRH2 that affects antibody activity.
Mabs, 15, 2023
8JEL
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BU of 8jel by Molmil
Crystal structure of TIGIT in complexed with Ociperlimab, crystal form I
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEO
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BU of 8jeo by Molmil
Crystal structure of TIGIT in complexed with Tiragolumab
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEP
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BU of 8jep by Molmil
Crystal structure of Ociperlimab
Descriptor: antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEQ
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BU of 8jeq by Molmil
Crystal structure of Tiragolumab
Descriptor: antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEN
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BU of 8jen by Molmil
Crystal structure of TIGIT in complexed with Ociperlimab, crystal form II
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
7MBO
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BU of 7mbo by Molmil
FACTOR XIA (PICHIA PASTORIS; C500S [C122S]) IN COMPLEX WITH THE INHIBITOR Milvexian (BMS-986177), IUPAC NAME:(6R,10S)-10-{4-[5-chloro-2-(4-chloro-1H-1,2,3-triazol-1-yl)phenyl]-6- oxopyrimidin-1(6H)-yl}-1-(difluoromethyl)-6-methyl-1,4,7,8,9,10-hexahydro-15,11- (metheno)pyrazolo[4,3-b][1,7]diazacyclotetradecin-5(6H)-one
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor XIa light chain, Milvexian
Authors:Sheriff, S.
Deposit date:2021-04-01
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.924 Å)
Cite:Discovery of Milvexian, a High-Affinity, Orally Bioavailable Inhibitor of Factor XIa in Clinical Studies for Antithrombotic Therapy.
J.Med.Chem., 65, 2022
2H5E
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BU of 2h5e by Molmil
Crystal structure of E.coli polypeptide release factor RF3
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Peptide chain release factor RF-3
Authors:Song, H.W, Zhou, Z.H.
Deposit date:2006-05-26
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors
Cell(Cambridge,Mass.), 129, 2007
2LJV
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BU of 2ljv by Molmil
Solution structure of Rhodostomin G50L mutant
Descriptor: Disintegrin rhodostomin
Authors:Chuang, W, Shiu, J, Chen, C, Chen, Y, Chang, Y, Huang, C.
Deposit date:2011-09-29
Release date:2012-10-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Design of Integrin AlphaVbeta3-Specific Disintegrin for Cancer Therapy
To be Published
7TZL
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BU of 7tzl by Molmil
The DH dehydratase domain of AlnB
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Swain, K, Blackson, W, Wang, B, Zhao, H, Nannenga, B.L.
Deposit date:2022-02-16
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The programming of alpha,beta-polyene biosynthesis by a bacterial iterative type I polyketide synthase
To Be Published
6AHU
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BU of 6ahu by Molmil
Cryo-EM structure of human Ribonuclease P with mature tRNA
Descriptor: H1 RNA, Ribonuclease P protein subunit p14, Ribonuclease P protein subunit p20, ...
Authors:Wu, J, Niu, S, Tan, M, Lan, P, Lei, M.
Deposit date:2018-08-20
Release date:2018-12-05
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
Cell, 175, 2018

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PDB entries from 2024-04-24

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