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8IIC
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BU of 8iic by Molmil
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta40 mutant (residues 41-546)
Descriptor: Polymerase polyprotein
Authors:Fang, X, Lu, G, Hou, C, Gong, P.
Deposit date:2023-02-24
Release date:2023-06-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
8IIB
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BU of 8iib by Molmil
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
Descriptor: CADMIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fang, X, Lu, G, Hou, C, Gong, P.
Deposit date:2023-02-24
Release date:2023-06-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023
6JIQ
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BU of 6jiq by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6JIP
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BU of 6jip by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), PENTAETHYLENE GLYCOL, SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6NXJ
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BU of 6nxj by Molmil
Flavin Transferase ApbE from Vibrio cholerae, H257G mutant
Descriptor: FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
Authors:Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-02-08
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
6NXI
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BU of 6nxi by Molmil
Flavin Transferase ApbE from Vibrio cholerae
Descriptor: 1,2-ETHANEDIOL, FAD:protein FMN transferase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Osipiuk, J, Fang, X, Chakravarthy, S, Juarez, O, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-02-08
Release date:2019-03-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Conserved residue His-257 ofVibrio choleraeflavin transferase ApbE plays a critical role in substrate binding and catalysis.
J.Biol.Chem., 294, 2019
6M3A
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BU of 6m3a by Molmil
Staphylococcus aureus Bap-C1
Descriptor: Biofilm-associated surface protein
Authors:Fang, X, Ning, X.
Deposit date:2020-03-03
Release date:2021-04-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Staphylococcus aureus Bap_C1
To Be Published
8JY0
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BU of 8jy0 by Molmil
Crystal structure of RhoBAST complexed with TMR-DN
Descriptor: 2,4-dinitroaniline, 5-aminocarbonyl-2-[3-(dimethylamino)-6-dimethylazaniumylidene-xanthen-9-yl]benzoate, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Zhang, Y, Xiao, Y, Xu, Z, Fang, X.
Deposit date:2023-07-02
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural mechanisms for binding and activation of a contact-quenched fluorophore by RhoBAST.
Nat Commun, 15, 2024
2LF0
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BU of 2lf0 by Molmil
Solution structure of sf3636, a two-domain unknown function protein from Shigella flexneri 2a, determined by joint refinement of NMR, residual dipolar couplings and small-angle X-ray scattering, NESG target SfR339/OCSP target sf3636
Descriptor: Uncharacterized protein yibL
Authors:Wu, B, Lemak, A, Yee, A, Lee, H, Gutmanas, A, Semesi, A, Garcia, M, Fang, X, Wang, Y, Prestegard, J.H, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2011-06-27
Release date:2011-07-13
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of sf3636, a two-domain unknown function protein from Shigella flexneri 2a, determined by joint refinement of NMR, residual dipolar couplings and small-angle X-ray scattering
To be Published
7WIF
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BU of 7wif by Molmil
The THF-II riboswitch bound to H4B
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, RNA (50-MER)
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIE
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BU of 7wie by Molmil
The THF-II riboswitch bound to 7DG
Descriptor: 7-DEAZAGUANINE, RNA (50-MER)
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIA
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BU of 7wia by Molmil
The apo-form of THF-II C22G riboswitch
Descriptor: RNA (50-MER)
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WII
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BU of 7wii by Molmil
The THF-II riboswitch bound to NPR
Descriptor: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, RNA (50-MER)
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WI9
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BU of 7wi9 by Molmil
The THF-II riboswitch bound to THF and soaking with SeUrea
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER), selenourea
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIB
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BU of 7wib by Molmil
The THF-II riboswitch bound to THF
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER)
Authors:Xu, L, Fang, X, Xiao, Y.
Deposit date:2022-01-03
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
1E5B
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BU of 1e5b by Molmil
Internal xylan binding domain from C. fimi Xyn10A, R262G mutant
Descriptor: XYLANASE D
Authors:Simpson, P.J, Hefang, X, Bolam, D.N, Gilbert, H.J, Williamson, M.P.
Deposit date:2000-07-24
Release date:2001-05-25
Last modified:2018-10-24
Method:SOLUTION NMR
Cite:The Structural Basis for the Ligand Specificity of Family 2 Carbohydrate Binding Nodules
J.Biol.Chem., 275, 2000
1E5C
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BU of 1e5c by Molmil
Internal xylan binding domain from C. fimi Xyn10A, R262G mutant
Descriptor: XYLANASE D
Authors:Simpson, P.J, Hefang, X, Bolam, D.N, Gilbert, H.J, Williamson, M.P.
Deposit date:2000-07-24
Release date:2001-05-25
Last modified:2018-10-24
Method:SOLUTION NMR
Cite:The Structural Basis for the Ligand Specificity of Family 2 Carbohydrate Binding Nodules
J.Biol.Chem., 275, 2000
1Y9X
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BU of 1y9x by Molmil
Solution structure of Archaeon DNA-binding protein ssh10b
Descriptor: DNA/RNA-binding protein Alba 1
Authors:Cui, Q, Tong, Y, Wang, J.
Deposit date:2004-12-16
Release date:2005-06-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A stabilizing alpha/beta-hydrophobic core greatly contributes to hyperthermostability of archaeal [P62A]Ssh10b.
Biochemistry, 47, 2008
8KFA
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BU of 8kfa by Molmil
Cryo-EM structure of HSV-1 gB with D48 Fab complex
Descriptor: D48 heavy chain, D48 light chain, Envelope glycoprotein B
Authors:Yang, J, Sun, C, Fang, X, Zeng, M, Liu, Z.
Deposit date:2023-08-15
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:The structure of HSV-1 gB bound to a potent neutralizing antibody reveals a conservative antigenic domain across herpesviruses
hlife, 2023
3SPF
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BU of 3spf by Molmil
Crystal Structure of Bcl-xL bound to BM501
Descriptor: 4-(4-chlorophenyl)-1-[(3S)-3,4-dihydroxybutyl]-N-[3-(4-methylpiperazin-1-yl)propyl]-3-phenyl-1H-pyrrole-2-carboxamide, Bcl-2-like protein 1, GLYCEROL
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2011-07-01
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of Bcl-2 and Bcl-xL Inhibitors with Subnanomolar Binding Affinities Based upon a New Scaffold.
J.Med.Chem., 55, 2012
5T16
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BU of 5t16 by Molmil
Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
Descriptor: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
Authors:Song, H, Ji, X.
Deposit date:2016-08-18
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
7C7R
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BU of 7c7r by Molmil
Biofilm associated protein - B domain
Descriptor: Biofilm-associated surface protein, CALCIUM ION
Authors:Ma, J.F, Xu, Z.H, Zhang, Y.K, Cheng, X, Fan, S.L, Wang, J.W, Fang, X.Y.
Deposit date:2020-05-26
Release date:2021-05-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch.
Embo J., 40, 2021
7C7U
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BU of 7c7u by Molmil
Biofilm associated protein - BSP domain
Descriptor: Biofilm-associated surface protein, CALCIUM ION
Authors:Ma, J.F, Xu, Z.H, Zhang, Y.K, Cheng, X, Fan, S.L, Wang, J.W, Fang, X.Y.
Deposit date:2020-05-26
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch.
Embo J., 40, 2021
8FP3
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BU of 8fp3 by Molmil
PKCeta kinase domain in complex with compound 11
Descriptor: (3P)-3-{4-[(3R,5S)-3-amino-5-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile, Protein kinase C eta type
Authors:Johnson, E.
Deposit date:2023-01-03
Release date:2023-04-05
Last modified:2023-04-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1.
J.Med.Chem., 66, 2023
8FH4
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BU of 8fh4 by Molmil
Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with 3-[6-chloro-4-(9-methyl-1-oxa-4,9-diazaspiro[5.5]undec-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile
Descriptor: (3P)-3-[6-chloro-4-(9-methyl-1-oxa-4,9-diazaspiro[5.5]undecan-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile, Mitogen-activated protein kinase kinase kinase kinase 1, SULFATE ION
Authors:McTigue, M, Johnson, E, Cronin, C.
Deposit date:2022-12-13
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.827 Å)
Cite:Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1.
J.Med.Chem., 66, 2023

 

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