Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2GUI
DownloadVisualize
BU of 2gui by Molmil
Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit of E. coli DNA Polymerase III
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase III epsilon subunit, ...
Authors:Park, A.Y, Carr, P.D, Ollis, D.L, Dixon, N.E.
Deposit date:2006-04-30
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit E. coli DNA Polymerase III
To be Published
2HAJ
DownloadVisualize
BU of 2haj by Molmil
Solution structure of the helicase-binding domain of Escherichia coli primase
Descriptor: DNA primase
Authors:Su, X.C, Loscha, K.V, Dixon, N.E, Otting, G.
Deposit date:2006-06-13
Release date:2006-10-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Monomeric solution structure of the helicase-binding domain of Escherichia coli DnaG primase
Febs J., 273, 2006
1J53
DownloadVisualize
BU of 1j53 by Molmil
Structure of the N-terminal Exonuclease Domain of the Epsilon Subunit of E.coli DNA Polymerase III at pH 8.5
Descriptor: 1,2-ETHANEDIOL, DNA polymerase III, epsilon chain, ...
Authors:Hamdan, S, Carr, P.D, Brown, S.E, Ollis, D.L, Dixon, N.E.
Deposit date:2002-01-22
Release date:2002-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Proofreading during Replication of the Escherichia coli Chromosome
Structure, 10, 2002
1J54
DownloadVisualize
BU of 1j54 by Molmil
Structure of the N-terminal exonuclease domain of the epsilon subunit of E.coli DNA polymerase III at pH 5.8
Descriptor: 1,2-ETHANEDIOL, DNA polymerase III, epsilon chain, ...
Authors:Hamdan, S, Carr, P.D, Brown, S.E, Ollis, D.L, Dixon, N.E.
Deposit date:2002-01-22
Release date:2002-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Proofreading during Replication of the Escherichia coli Chromosome
Structure, 10, 2002
2PII
DownloadVisualize
BU of 2pii by Molmil
PII, GLNB PRODUCT
Descriptor: PII
Authors:Carr, P.D, Cheah, E, Suffolk, P.M, Ollis, D.L.
Deposit date:1995-05-02
Release date:1996-06-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structure of the signal transduction protein from Escherichia coli at 1.9 A.
Acta Crystallogr.,Sect.D, 52, 1996
3X1O
DownloadVisualize
BU of 3x1o by Molmil
Crystal structure of the ROQ domain of human Roquin
Descriptor: IODIDE ION, Roquin-1
Authors:Ose, T, Verma, A, Cockburn, J.B, Berrow, N.S, Alderton, D, Stuart, D, Owens, R.J, Jones, E.Y.
Deposit date:2014-11-26
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis
Nat Commun, 6, 2015
1PIL
DownloadVisualize
BU of 1pil by Molmil
STRUCTURE OF THE ESCHERICHIA COLI SIGNAL TRANSDUCING PROTEIN PII
Descriptor: SIGNAL TRANSDUCING PROTEIN P2
Authors:Ollis, D.L, Cheah, U.E, Carr, P.D, Suffolk, P.M.
Deposit date:1994-08-04
Release date:1995-08-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Escherichia coli signal transducing protein PII.
Structure, 2, 1994
4XR0
DownloadVisualize
BU of 4xr0 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- G/T mismatch.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), DNA (5'-D(*AP*TP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR1
DownloadVisualize
BU of 4xr1 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- AG/AT mismatch.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*TP*AP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*G)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR3
DownloadVisualize
BU of 4xr3 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- GC(6) swapped.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*AP*CP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
4XR2
DownloadVisualize
BU of 4xr2 by Molmil
Escherichia Coli Replication Terminator Protein (Tus) H114A mutant Complexed With DNA- TerA lock.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*C)-3'), ...
Authors:Oakley, A.J.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Replisome speed determines the efficiency of the Tus-Ter replication termination barrier.
Nature, 525, 2015
6AP4
DownloadVisualize
BU of 6ap4 by Molmil
Crystal structure of the DNA polymerase III subunit beta from Acinetobacter baumannii
Descriptor: DNA polymerase III subunit beta, MAGNESIUM ION
Authors:McGrath, A.E, Oakley, A.J.
Deposit date:2017-08-16
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens.
J. Struct. Biol., 204, 2018
6AMS
DownloadVisualize
BU of 6ams by Molmil
Crystal structure of the DNA polymerase III subunit beta from Pseudomonas aeruginosa
Descriptor: Beta sliding clamp, PHOSPHATE ION
Authors:McGrath, A.E, Oakley, A.J.
Deposit date:2017-08-11
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens.
J. Struct. Biol., 204, 2018
6AMQ
DownloadVisualize
BU of 6amq by Molmil
Crystal structure of the DNA polymerase III subunit beta from Enterobacter cloacae
Descriptor: DNA polymerase III subunit beta, SULFATE ION
Authors:McGrath, A.E, Oakley, A.J.
Deposit date:2017-08-11
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens.
J. Struct. Biol., 204, 2018
6CIV
DownloadVisualize
BU of 6civ by Molmil
Lactam cyclised mimetic of a fragment of p21
Descriptor: p21
Authors:Wegener, K.L.
Deposit date:2018-02-25
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
6CBI
DownloadVisualize
BU of 6cbi by Molmil
PCNA in complex with inhibitor
Descriptor: GLY-ARG-LYS-ARG-ARG-GLN-DAB-SER-MET-THR-GLU-PHE-TYR-HIS, Proliferating cell nuclear antigen, SULFATE ION
Authors:Bruning, J.B, Wegener, K.L.
Deposit date:2018-02-03
Release date:2018-07-04
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
6CIX
DownloadVisualize
BU of 6cix by Molmil
Lactam cyclised mimetic of a fragment of p21
Descriptor: p21
Authors:Wegener, K.L.
Deposit date:2018-02-25
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
6CEJ
DownloadVisualize
BU of 6cej by Molmil
Solution structure of a 14mer fragment of the p21 protein
Descriptor: Cyclin-dependent kinase inhibitor 1
Authors:Wegener, K.L.
Deposit date:2018-02-12
Release date:2018-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
7SSG
DownloadVisualize
BU of 7ssg by Molmil
Mfd DNA complex
Descriptor: DNA (5'-D(P*TP*GP*GP*CP*GP*GP*CP*GP*AP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*GP*CP*CP*TP*CP*GP*CP*TP*GP*CP*CP*A)-3'), Transcription-repair-coupling factor
Authors:Oakley, A.J, Xu, Z.-Q.
Deposit date:2021-11-11
Release date:2022-05-25
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Mechanism of transcription modulation by the transcription-repair coupling factor.
Nucleic Acids Res., 50, 2022
2NUL
DownloadVisualize
BU of 2nul by Molmil
PEPTIDYLPROLYL ISOMERASE FROM E. COLI
Descriptor: PEPTIDYLPROLYL ISOMERASE
Authors:Edwards, K.J, Ollis, D.L.
Deposit date:1996-11-14
Release date:1997-11-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of cytoplasmic Escherichia coli peptidyl-prolyl isomerase: evidence for decreased mobility of loops upon complexation.
J.Mol.Biol., 271, 1997
4MJR
DownloadVisualize
BU of 4mjr by Molmil
E. coli sliding clamp in complex with (S)-Carprofen
Descriptor: (2S)-2-(6-chloro-9H-carbazol-2-yl)propanoic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Yin, Z, Oakley, A.J.
Deposit date:2013-09-04
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:DNA replication is the target for the antibacterial effects of nonsteroidal anti-inflammatory drugs.
Chem.Biol., 21, 2014
4MJP
DownloadVisualize
BU of 4mjp by Molmil
E. coli sliding clamp in complex with (R)-Vedaprofen
Descriptor: (2R)-2-(4-cyclohexylnaphthalen-1-yl)propanoic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Yin, Z, Oakley, A.J.
Deposit date:2013-09-04
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.855 Å)
Cite:DNA replication is the target for the antibacterial effects of nonsteroidal anti-inflammatory drugs.
Chem.Biol., 21, 2014
4MJQ
DownloadVisualize
BU of 4mjq by Molmil
E. coli sliding clamp in complex with Bromfenac
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Yin, Z, Oakley, A.J.
Deposit date:2013-09-04
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:DNA replication is the target for the antibacterial effects of nonsteroidal anti-inflammatory drugs.
Chem.Biol., 21, 2014
4N96
DownloadVisualize
BU of 4n96 by Molmil
E. coli sliding clamp in complex with 6-nitroindazole
Descriptor: 6-NITROINDAZOLE, CALCIUM ION, CHLORIDE ION, ...
Authors:Yin, Z, Oakley, A.J.
Deposit date:2013-10-19
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach.
J.Med.Chem., 57, 2014
4N95
DownloadVisualize
BU of 4n95 by Molmil
E. coli sliding clamp in complex with 5-chloroindoline-2,3-dione
Descriptor: 5-chloro-1H-indole-2,3-dione, CALCIUM ION, CHLORIDE ION, ...
Authors:Yin, Z, Oakley, A.J.
Deposit date:2013-10-19
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach.
J.Med.Chem., 57, 2014

219869

건을2024-05-15부터공개중

PDB statisticsPDBj update infoContact PDBjnumon