3KYF
 
 | | Crystal structure of P4397 complexed with c-di-GMP | | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, Putative uncharacterized protein | | Authors: | Ryu, K.S, Ko, J, Kim, H, Choi, B.S. | | Deposit date: | 2009-12-06 | | Release date: | 2010-04-14 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of PP4397 Reveals the Molecular Basis for Different c-di-GMP Binding Modes by Pilz Domain Proteins.
J.Mol.Biol., 398, 2010
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2JQT
 | | Structure of the bacterial replication origin-associated protein Cnu | | Descriptor: | H-NS/stpA-binding protein 2 | | Authors: | Bae, S.H, Liu, D, Lim, H.M, Lee, Y, Choi, B.S. | | Deposit date: | 2007-06-07 | | Release date: | 2008-04-22 | | Last modified: | 2023-12-20 | | Method: | SOLUTION NMR | | Cite: | Structure of the nucleoid-associated protein Cnu reveals common binding sites for H-NS in Cnu and Hha.
Biochemistry, 47, 2008
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1SNH
 | | Solution structure of the DNA Decamer Duplex Containing Double TG Mismatches of Cis-syn Cyclobutane Pyrimidine Dimer | | Descriptor: | 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*GP*TP*GP*CP*G)-3' | | Authors: | Lee, J.H, Park, C.J, Shin, J.S, Ikegami, T, Akutsu, H, Choi, B.S. | | Deposit date: | 2004-03-11 | | Release date: | 2004-05-18 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
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3KYG
 | | Crystal structure of VCA0042 (L135R) complexed with c-di-GMP | | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, Putative uncharacterized protein VCA0042 | | Authors: | Ryu, K.S, Ko, J, Kim, H, Choi, B.S. | | Deposit date: | 2009-12-06 | | Release date: | 2010-04-14 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of PP4397 Reveals the Molecular Basis for Different c-di-GMP Binding Modes by Pilz Domain Proteins.
J.Mol.Biol., 398, 2010
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1YNX
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1ZYF
 | | Structure of a Supercoiling Responsive DNA Site | | Descriptor: | 5'-D(*CP*AP*AP*CP*CP*AP*TP*GP*GP*TP*TP*G)-3' | | Authors: | Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S. | | Deposit date: | 2005-06-10 | | Release date: | 2006-05-23 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
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1ZYH
 | | Structure of a Supercoiling Responsive DNA site | | Descriptor: | 5'-D(*CP*AP*AP*CP*CP*AP*GP*GP*GP*TP*TP*G)-3', 5'-D(*CP*AP*AP*CP*CP*CP*TP*GP*GP*TP*TP*G)-3' | | Authors: | Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S. | | Deposit date: | 2005-06-10 | | Release date: | 2006-05-23 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
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1ZYG
 | | Structure of a Supercoiling Responsive DNA Site | | Descriptor: | 5'-D(*CP*AP*AP*CP*CP*CP*GP*GP*GP*TP*TP*G)-3' | | Authors: | Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S. | | Deposit date: | 2005-06-10 | | Release date: | 2006-05-23 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
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1X8D
 | | Crystal structure of E. coli YiiL protein containing L-rhamnose | | Descriptor: | Hypothetical protein yiiL, L-RHAMNOSE | | Authors: | Ryu, K.S, Kim, J.I, Cho, S.J, Park, D, Park, C, Lee, J.O, Choi, B.S. | | Deposit date: | 2004-08-18 | | Release date: | 2005-05-17 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural Insights into the Monosaccharide Specificity of Escherichia coli Rhamnose Mutarotase
J.Mol.Biol., 349, 2005
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1P1A
 | | NMR structure of ubiquitin-like domain of hHR23B | | Descriptor: | UV excision repair protein RAD23 homolog B | | Authors: | Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S. | | Deposit date: | 2003-04-11 | | Release date: | 2004-07-13 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a
J.Biol.Chem., 278, 2003
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1PIB
 | | Solution structure of DNA containing CPD opposited by GA | | Descriptor: | 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3' | | Authors: | Lee, J.H, Park, C.J, Shin, J.S, Choi, B.S. | | Deposit date: | 2003-05-30 | | Release date: | 2004-05-18 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
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4XTT
 | | Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP) | | Descriptor: | (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Putative potassium transport protein | | Authors: | Kim, H, Youn, S.J, Kim, S.O, Ko, J, Lee, J.O, Choi, B.S. | | Deposit date: | 2015-01-24 | | Release date: | 2015-05-20 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.708 Å) | | Cite: | Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C Domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP)
J.Biol.Chem., 290, 2015
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2MH9
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4EXT
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2KZ3
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6KYV
 | | Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs | | Descriptor: | Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION | | Authors: | Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S. | | Deposit date: | 2019-09-20 | | Release date: | 2020-09-23 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
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2RVC
 | | Solution structure of Zalpha domain of goldfish ZBP-containing protein kinase | | Descriptor: | Interferon-inducible and double-stranded-dependent eIF-2kinase | | Authors: | Lee, A, Park, C, Park, J, Kwon, M, Choi, Y, Kim, K, Choi, B, Lee, J. | | Deposit date: | 2015-07-08 | | Release date: | 2016-02-03 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the Z-DNA binding domain of PKR-like protein kinase from Carassius auratus and quantitative analyses of the intermediate complex during B-Z transition.
Nucleic Acids Res., 44, 2016
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2KAL
 | | NMR structure of fully methylated GATC site | | Descriptor: | 5'-D(*DCP*DGP*DCP*DAP*DGP*(6MA)P*DTP*DCP*DTP*DCP*DGP*DC)-3', 5'-D(*DGP*DCP*DGP*DAP*DGP*(6MA)P*DTP*DCP*DTP*DGP*DCP*DG)-3' | | Authors: | Bang, J, Bae, S, Park, C, Lee, J, Choi, B. | | Deposit date: | 2008-11-09 | | Release date: | 2009-02-10 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structural and dynamics study of DNA dodecamer duplexes that contain un-, hemi-, or fully methylated GATC sites.
J.Am.Chem.Soc., 130, 2008
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2OQQ
 | | Crystal structure of HY5 leucine zipper homodimer from Arabidopsis thaliana | | Descriptor: | Transcription factor HY5 | | Authors: | Yoon, M.-K, Kim, H.M, Choi, G, Lee, J.-O, Choi, B.-S. | | Deposit date: | 2007-02-01 | | Release date: | 2007-03-20 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structural basis for the conformational integrity of the Arabidopsis thaliana HY5 leucine zipper homodimer.
J.Biol.Chem., 282, 2007
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1JO7
 | | Solution Structure of Influenza A Virus Promoter | | Descriptor: | Influenza A virus promoter RNA | | Authors: | Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S. | | Deposit date: | 2001-07-27 | | Release date: | 2001-09-19 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
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2LWK
 | | Solution structure of small molecule-influenza RNA complex | | Descriptor: | 6,7-dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine, RNA (32-MER) | | Authors: | Lee, M.-K, Varani, G, Choi, B.-S, Pellecchia, M, Seattle Structural Genomics Center for Infectious Disease (SSGCID) | | Deposit date: | 2012-08-01 | | Release date: | 2012-08-29 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication.
Chem.Commun.(Camb.), 50, 2014
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1PVE
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1CFL
 | | DNA DECAMER DUPLEX CONTAINING T5-T6 PHOTOADDUCT | | Descriptor: | DNA (5'-D(*CP*GP*CP*AP*(64T)P*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3') | | Authors: | Lee, J.-H, Hwang, G.-S, Choi, B.-S. | | Deposit date: | 1999-03-19 | | Release date: | 1999-05-28 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct.
Proc.Natl.Acad.Sci.USA, 96, 1999
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