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PDB: 14 results

1UAB
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NMR structure of hemimethylated GATC site
Descriptor: DNA (5'-D(*CP*GP*CP*AP*GP*(6MA)P*TP*CP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3')
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-07
Release date:2004-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003
1JO7
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Solution Structure of Influenza A Virus Promoter
Descriptor: Influenza A virus promoter RNA
Authors:Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S.
Deposit date:2001-07-27
Release date:2001-09-19
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
1ZYF
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Structure of a Supercoiling Responsive DNA Site
Descriptor: 5'-D(*CP*AP*AP*CP*CP*AP*TP*GP*GP*TP*TP*G)-3'
Authors:Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
1ZYH
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Structure of a Supercoiling Responsive DNA site
Descriptor: 5'-D(*CP*AP*AP*CP*CP*AP*GP*GP*GP*TP*TP*G)-3', 5'-D(*CP*AP*AP*CP*CP*CP*TP*GP*GP*TP*TP*G)-3'
Authors:Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
1ZYG
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Structure of a Supercoiling Responsive DNA Site
Descriptor: 5'-D(*CP*AP*AP*CP*CP*CP*GP*GP*GP*TP*TP*G)-3'
Authors:Bae, S.H, Yun, S.H, Sun, D, Lim, H.M, Choi, B.S.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural and dynamic basis of a supercoiling-responsive DNA element
Nucleic Acids Res., 34, 2006
1OQ2
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NMR structure of hemimethylated GATC site
Descriptor: 5'-D(*CP*GP*CP*AP*GP*(6MA)P*TP*CP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3'
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-07
Release date:2004-04-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003
1OPQ
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NMR structure of unmethylated GATC site
Descriptor: 5'-D(*CP*GP*CP*AP*GP*AP*TP*CP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3'
Authors:Bae, S.-H, Cheong, H.-K, Kang, S, Hwang, D.S, Cheong, C, Choi, B.-S.
Deposit date:2003-03-06
Release date:2004-04-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition
J.Biol.Chem., 278, 2003
2JQT
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Structure of the bacterial replication origin-associated protein Cnu
Descriptor: H-NS/stpA-binding protein 2
Authors:Bae, S.H, Liu, D, Lim, H.M, Lee, Y, Choi, B.S.
Deposit date:2007-06-07
Release date:2008-04-22
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structure of the nucleoid-associated protein Cnu reveals common binding sites for H-NS in Cnu and Hha.
Biochemistry, 47, 2008
6TL8
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Structural basis of SALM3 dimerization and adhesion complex formation with the presynaptic receptor protein tyrosine phosphatases
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Myeloid cell surface antigen CD33,Leucine-rich repeat and fibronectin type-III domain-containing protein 4
Authors:Karki, S, Shkumatov, A.V, Bae, S, Ko, J, Kajander, T.
Deposit date:2019-12-02
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of SALM3 dimerization and synaptic adhesion complex formation with PTP sigma.
Sci Rep, 10, 2020
1M82
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SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Descriptor: RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Authors:Park, C.-J, Bae, S.-H, Lee, M.-K, Varani, G, Choi, B.-S.
Deposit date:2002-07-24
Release date:2003-06-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the influenza A virus cRNA promoter: implications for differential recognition of viral promoter structures by RNA-dependent RNA polymerase
NUCLEIC ACIDS RES., 31, 2003
1MFY
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SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER
Descriptor: C4 promoter of influneza A virus
Authors:Lee, M.-K, Bae, S.-H, Park, C.-J, Cheong, H.-K, Cheong, C, Choi, B.-S.
Deposit date:2002-08-14
Release date:2002-09-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:A single-nucleotide natural variation (U4 to C4) in an influenza A virus promoter exhibits a large structural change: implications for differential viral RNA synthesis by RNA-dependent RNA polymerase.
Nucleic Acids Res., 31, 2003
2KAL
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NMR structure of fully methylated GATC site
Descriptor: 5'-D(*DCP*DGP*DCP*DAP*DGP*(6MA)P*DTP*DCP*DTP*DCP*DGP*DC)-3', 5'-D(*DGP*DCP*DGP*DAP*DGP*(6MA)P*DTP*DCP*DTP*DGP*DCP*DG)-3'
Authors:Bang, J, Bae, S, Park, C, Lee, J, Choi, B.
Deposit date:2008-11-09
Release date:2009-02-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structural and dynamics study of DNA dodecamer duplexes that contain un-, hemi-, or fully methylated GATC sites.
J.Am.Chem.Soc., 130, 2008
1P1A
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BU of 1p1a by Molmil
NMR structure of ubiquitin-like domain of hHR23B
Descriptor: UV excision repair protein RAD23 homolog B
Authors:Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S.
Deposit date:2003-04-11
Release date:2004-07-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a
J.Biol.Chem., 278, 2003
1QKG
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DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3')
Authors:Lee, J.-H, Bae, S.-H, Choi, Y.-J, Choi, B.-S.
Deposit date:1999-07-20
Release date:2000-05-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Dewar Photoproduct of Thymidylyl(3'-->5')-Thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A Rule".
Proc.Natl.Acad.Sci.USA, 97, 2000

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