Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6R0T
DownloadVisualize
BU of 6r0t by Molmil
Getah virus macro domain in complex with ADPr in open conformation
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Non-structural polyprotein, ...
Authors:Ferreira Ramos, A.S, Sulzenbacher, G, Coutard, B.
Deposit date:2019-03-13
Release date:2020-04-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
6R0R
DownloadVisualize
BU of 6r0r by Molmil
Getah virus macro domain in complex with ADPr covalently bond to Cys34
Descriptor: 1,2-ETHANEDIOL, Non-structural polyprotein, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] hydrogen phosphate
Authors:Ferreira Ramos, A.S, Sulzenbacher, G, Coutard, B.
Deposit date:2019-03-13
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography.
Sci Rep, 10, 2020
6S3A
DownloadVisualize
BU of 6s3a by Molmil
Coxsackie B3 2C protein in complex with S-Fluoxetine
Descriptor: (3S)-N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine, 2C protein, CHLORIDE ION, ...
Authors:El Kazzi, P, Papageorgiou, N, Ferron, F.P, Bauer, L, van Kuppeveld, F, Coutard, B.
Deposit date:2019-06-24
Release date:2021-01-13
Last modified:2022-06-01
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Fluoxetine targets an allosteric site in the enterovirus 2C AAA+ ATPase and stabilizes a ring-shaped hexameric complex.
Sci Adv, 8, 2022
6T3W
DownloadVisualize
BU of 6t3w by Molmil
Coxsackie B3 2C protein in complex with S-Fluoxetine
Descriptor: (3S)-N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine, 2C protein, SODIUM ION, ...
Authors:El Kazzi, P, Papageorgiou, N, Ferron, F.P, Bauer, L, van Kuppeveld, F, Coutard, B.
Deposit date:2019-10-11
Release date:2020-11-18
Last modified:2022-06-01
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Fluoxetine targets an allosteric site in the enterovirus 2C AAA+ ATPase and stabilizes a ring-shaped hexameric complex.
Sci Adv, 8, 2022
5MQX
DownloadVisualize
BU of 5mqx by Molmil
NMR solution structure of macro domain from Venezuelan equine encephalitis virus(VEEV) in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein3
Authors:Makrynitsa, G.I, Ntonti, D, Marousis, K.D, Matsoukas, M.T, Papageorgiou, N, Coutard, B, Bentrop, D, Spyroulias, G.A.
Deposit date:2016-12-21
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational plasticity of the VEEV macro domain is important for binding of ADP-ribose.
J.Struct.Biol., 206, 2019
6SX8
DownloadVisualize
BU of 6sx8 by Molmil
Mopeia Virus Exonuclease domain complexed with Manganese
Descriptor: MANGANESE (II) ION, Nucleoprotein, ZINC ION
Authors:Nguyen, T.H.V, Ferron, F.
Deposit date:2019-09-25
Release date:2021-07-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Inhibition of Arenaviridae nucleoprotein exonuclease by bisphosphonate
Iucrj, 2022
6SY8
DownloadVisualize
BU of 6sy8 by Molmil
Mopeia Virus Exonuclease domain fully depleted of Manganese un ALD compound
Descriptor: Nucleoprotein, ZINC ION
Authors:Nguyen, T.H.V, Ferron, F.
Deposit date:2019-09-27
Release date:2021-07-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Inhibition of Arenaviridae nucleoprotein exonuclease by bisphosphonate
Iucrj, 2022
6T2A
DownloadVisualize
BU of 6t2a by Molmil
Mopeia Virus Exonuclease domain partially complexed with Manganese
Descriptor: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, Nucleoprotein, ...
Authors:Nguyen, T.H.V, Ferron, F.
Deposit date:2019-10-08
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of Arenaviridae nucleoprotein exonuclease by bisphosphonate
Iucrj, 2022
6T6L
DownloadVisualize
BU of 6t6l by Molmil
Mopeia Virus Exonuclease domain complexed soak with Alendronate
Descriptor: MANGANESE (II) ION, Nucleoprotein, ZINC ION
Authors:Nguyen, T.H.V, Ferron, F.
Deposit date:2019-10-18
Release date:2021-07-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.757 Å)
Cite:Inhibition of Arenaviridae nucleoprotein exonuclease by bisphosphonate
Iucrj, 2022
5NJV
DownloadVisualize
BU of 5njv by Molmil
Flavivirus NS5 domain
Descriptor: CHLORIDE ION, NS5, S-ADENOSYLMETHIONINE
Authors:Talapatra, S.K, Chatrin, C, Kozielski, F.
Deposit date:2017-03-29
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the binary methyltransferase-SAH complex from Zika virus reveals a novel conformation for the mechanism of mRNA capping.
Oncotarget, 9, 2018
5NJU
DownloadVisualize
BU of 5nju by Molmil
Flavivirus NS5 domain
Descriptor: Genome polyprotein, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Talapatra, S.K, Chatrin, C, Kozielski, F.
Deposit date:2017-03-29
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the binary methyltransferase-SAH complex from Zika virus reveals a novel conformation for the mechanism of mRNA capping.
Oncotarget, 9, 2018
2HCN
DownloadVisualize
BU of 2hcn by Molmil
Crystal structure of RNA dependent RNA polymerase domain from west nile virus
Descriptor: CALCIUM ION, RNA-directed RNA polymerase (NS5), ZINC ION
Authors:Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2006-06-17
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
2HCS
DownloadVisualize
BU of 2hcs by Molmil
Crystal structure of RNA dependant RNA polymerase domain of West Nile virus
Descriptor: RNA-directed RNA polymerase (NS5), ZINC ION
Authors:Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2006-06-18
Release date:2007-02-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
2HFZ
DownloadVisualize
BU of 2hfz by Molmil
Crystal structure of RNA dependent RNA polymerase domain from West Nile virus
Descriptor: MAGNESIUM ION, RNA-directed RNA polymerase(NS5), ZINC ION
Authors:Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2006-06-26
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
3ELD
DownloadVisualize
BU of 3eld by Molmil
Wesselsbron methyltransferase in complex with Sinefungin
Descriptor: Methyltransferase, SINEFUNGIN, SULFATE ION
Authors:Bollati, M, Milani, M, Mastrangelo, E, Ricagno, S, Bolognesi, M.
Deposit date:2008-09-22
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3ELU
DownloadVisualize
BU of 3elu by Molmil
Wesselsbron virus Methyltransferase in complex with AdoMet
Descriptor: Methyltransferase, S-ADENOSYLMETHIONINE, SULFATE ION
Authors:Bollati, M, Ricagno, S, Milani, M, Mastrangelo, E, Bolognesi, M.
Deposit date:2008-09-23
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3EMD
DownloadVisualize
BU of 3emd by Molmil
Wesselsbron virus Methyltransferase in complex with Sinefungin and 7MeGpppA
Descriptor: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, SINEFUNGIN, SULFATE ION, ...
Authors:Bollati, M, Milani, M, Ricagno, S, Mastrangelo, E, Bolognesi, M.
Deposit date:2008-09-24
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3EMB
DownloadVisualize
BU of 3emb by Molmil
Wesselsbron virus Methyltransferase in complex with AdoMet and 7MeGpppG
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Methyltransferase, S-ADENOSYLMETHIONINE, ...
Authors:Bollati, M, Ricagno, S, Milani, M, Mastrangelo, E, Bolognesi, M.
Deposit date:2008-09-24
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3ELY
DownloadVisualize
BU of 3ely by Molmil
Wesselsbron virus Methyltransferase in complex with AdoHcy
Descriptor: DI(HYDROXYETHYL)ETHER, Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Bollati, M, Milani, M, Ricagno, S, Mastrangelo, E, Bolognesi, M.
Deposit date:2008-09-23
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3ELW
DownloadVisualize
BU of 3elw by Molmil
Wesselsbron virus Methyltransferase in complex with AdoMet and GpppG
Descriptor: DIGUANOSINE-5'-TRIPHOSPHATE, Methyltransferase, S-ADENOSYLMETHIONINE, ...
Authors:Bollati, M, Ricagno, S, Milani, M, Mastrangelo, E, Bolognesi, M.
Deposit date:2008-09-23
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
7P27
DownloadVisualize
BU of 7p27 by Molmil
NMR solution structure of Chikungunya virus macro domain
Descriptor: Polyprotein P1234
Authors:Lykouras, M.V, Tsika, A.C, Papageorgiou, N, Canard, B, Coutard, B, Bentrop, D, Spyroulias, G.A.
Deposit date:2021-07-04
Release date:2022-07-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Binding Adaptation of GS-441524 Diversifies Macro Domains and Downregulates SARS-CoV-2 de-MARylation Capacity.
J.Mol.Biol., 434, 2022
2P3L
DownloadVisualize
BU of 2p3l by Molmil
Crystal Structure of Dengue Methyltransferase in Complex with GpppA and S-Adenosyl-L-Homocysteine
Descriptor: CITRIC ACID, GLYCEROL, GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, ...
Authors:Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2007-03-09
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007
2P1D
DownloadVisualize
BU of 2p1d by Molmil
Crystal structure of dengue methyltransferase in complex with GTP and S-Adenosyl-L-homocysteine
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Egloff, M.P, Benarooch, D, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2007-03-05
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:An RNA cap (nucleoside-2'-O)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization
EMBO J., 21, 2002
2OXT
DownloadVisualize
BU of 2oxt by Molmil
Crystal structure of Meaban virus nucleoside-2'-O-methyltransferase
Descriptor: NUCLEOSIDE-2'-O-METHYLTRANSFERASE, S-ADENOSYLMETHIONINE
Authors:Mastrangelo, E, Milani, M, Bollati, M, Bolognesi, M.
Deposit date:2007-02-21
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural bases for substrate recognition and activity in Meaban virus nucleoside-2'-O-methyltransferase
Protein Sci., 16, 2007
2P3O
DownloadVisualize
BU of 2p3o by Molmil
Crystal Structure of Dengue Methyltransferase in Complex with 7MeGpppA and S-Adenosyl-L-homocysteine
Descriptor: CITRIC ACID, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Egloff, M.P, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2007-03-09
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.756 Å)
Cite:Structural and functional analysis of methylation and 5'-RNA sequence requirements of short capped RNAs by the methyltransferase domain of dengue virus NS5
J.Mol.Biol., 372, 2007

220113

数据于2024-05-22公开中

PDB statisticsPDBj update infoContact PDBjnumon