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5MPN
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BU of 5mpn by Molmil
Crystal structure of CREBBP bromodomain complexed with FA26
Descriptor: 1,2-ETHANEDIOL, 1-[4-ethoxy-3-[3-(2~{H}-1,2,3,4-tetrazol-5-yl)phenyl]phenyl]ethanone, CREB-binding protein
Authors:Zhu, J, Caflisch, A.
Deposit date:2016-12-16
Release date:2018-01-17
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
6ZD5
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BU of 6zd5 by Molmil
Crystal structure of YTHDC1 S378A mutant complex with m6A
Descriptor: N-methyladenosine, SULFATE ION, YTH domain containing 1
Authors:Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:2020-06-13
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
6ZDA
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BU of 6zda by Molmil
Crystal structure of YTHDC1 M438A mutant complex with m6A
Descriptor: N-methyladenosine, SULFATE ION, YTHDC1
Authors:Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:2020-06-14
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
6ZD8
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BU of 6zd8 by Molmil
Crystal structure of YTHDC1 T379V mutant
Descriptor: SULFATE ION, YTHDC1
Authors:Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:2020-06-14
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
5EWD
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BU of 5ewd by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED18
Descriptor: 4-phenylpyridine, NITRATE ION, Peregrin
Authors:Zhu, J, Caflisch, A.
Deposit date:2015-11-20
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
7PL1
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BU of 7pl1 by Molmil
Crystal structure of human METTL1 bound to Sinefungin
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SINEFUNGIN, ...
Authors:Nai, F, Caflisch, A.
Deposit date:2021-08-27
Release date:2021-09-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Small-Molecule Inhibitors of the m7G-RNA Writer METTL1
Acs Bio Med Chem Au, 2023
6GLJ
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BU of 6glj by Molmil
Crystal structure of hMTH1 F27A in complex with TH scaffold 1 in the absence of acetate
Descriptor: 4-phenylpyrimidin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.301 Å)
Cite:hMTH1 F27A in complex with TH scaffold 1.
To Be Published
6GLH
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BU of 6glh by Molmil
Crystal structure of hMTH1 F27A in complex with LW14 in the absence of acetate
Descriptor: 1~{H}-imidazo[4,5-b]pyridin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:hMTH1 F27A in complex with LW14
To Be Published
6GLO
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BU of 6glo by Molmil
Crystal structure of hMTH1 N33G in the presence of acetate
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:hMTH1 N33G
To Be Published
6GLP
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BU of 6glp by Molmil
Crystal structure of hMTH1 N33G in complex with LW14 in the presence of acetate
Descriptor: 1~{H}-imidazo[4,5-b]pyridin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, ACETATE ION, ...
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:hMTH1 N33G in complex with LW14
To Be Published
6GLT
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BU of 6glt by Molmil
Crystal structure of hMTH1 D120N in the presence of acetate
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, DIMETHYL SULFOXIDE
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Method:X-RAY DIFFRACTION (1.596 Å)
Cite:in progress
To Be Published
6GLV
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BU of 6glv by Molmil
Crystal structure of hMTH1 D120N in complex with TH scaffold 1 in the absence of acetate
Descriptor: 4-phenylpyrimidin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:hMTH1 D120N in complex with TH scaffold 1
To Be Published
6GLI
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BU of 6gli by Molmil
Crystal structure of hMTH1 F27A in complex with TH scaffold 1 in the presence of acetate
Descriptor: 4-phenylpyrimidin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:hMTH1 F27A in complex with TH scaffold 1
To Be Published
6GLN
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BU of 6gln by Molmil
Crystal structure of hMTH1 N33A in complex with TH scaffold 1 in the absence of acetate
Descriptor: 4-phenylpyrimidin-2-amine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Eberle, S.A, Wiedmer, L, Sledz, P, Caflisch, A.
Deposit date:2018-05-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:hMTH1 N33A in complex with TH scaffold 1
To Be Published
5E73
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BU of 5e73 by Molmil
Crystal Structure of BAZ2B bromodomain in complex with acetylindole compound UZH47
Descriptor: Bromodomain adjacent to zinc finger domain protein 2B, N-(1-acetyl-1H-indol-3-yl)-N-(5-hydroxy-2-methylphenyl)acetamide
Authors:Lolli, G, Spiliotopoulos, D, Unzue, A, Nevado, C, Caflisch, A.
Deposit date:2015-10-11
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The "Gatekeeper" Residue Influences the Mode of Binding of Acetyl Indoles to Bromodomains.
J. Med. Chem., 59, 2016
5ENG
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BU of 5eng by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with UP39
Descriptor: CREB-binding protein, methyl 2-[2-(3,5-dihydro-2~{H}-pyrazin-4-yl)ethoxy]-5-[(5-ethanoyl-2-ethoxy-phenyl)carbamoyl]benzoate
Authors:Dong, J, Caflisch, A.
Deposit date:2015-11-09
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
5EP7
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BU of 5ep7 by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with UN32
Descriptor: 3-[(1-methyl-6-oxidanylidene-pyridin-3-yl)carbonylamino]benzoic acid, CREB-binding protein
Authors:Dong, J, Caflisch, A.
Deposit date:2015-11-11
Release date:2016-11-23
Last modified:2018-10-10
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
8Q2Q
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BU of 8q2q by Molmil
Crystal structure of YTHDC1 in complex with Compound 2b (YL_32)
Descriptor: 2-chloranyl-~{N},9-dimethyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:2023-08-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 2b (YL_32)
To Be Published
8Q2W
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BU of 8q2w by Molmil
Crystal structure of YTHDC1 in complex with Compound 8 (CS_01)
Descriptor: 2-chloranyl-9-(cyclohexylmethyl)-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 8 (CS_01)
To Be Published
8Q32
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BU of 8q32 by Molmil
Crystal structure of YTHDC1 in complex with Compound 13 (ZA_364)
Descriptor: SULFATE ION, YTH domain-containing protein 1, ~{N}-[2-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]phenyl]methanesulfonamide
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 13 (ZA_364)
To Be Published
8Q4U
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BU of 8q4u by Molmil
Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b)
Descriptor: 9-[(3-chlorophenyl)methyl]-2-fluoranyl-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-07
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b)
To Be Published
8Q38
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BU of 8q38 by Molmil
Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347)
Descriptor: SULFATE ION, YTH domain-containing protein 1, methyl 3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzoate
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347)
To Be Published
8Q4Q
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BU of 8q4q by Molmil
Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337)
Descriptor: 4-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzoic acid, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-07
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337)
To Be Published
8Q4R
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BU of 8q4r by Molmil
Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)
Descriptor: SULFATE ION, YTH domain-containing protein 1, [4-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]phenyl]methanol
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-07
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)
To Be Published
8Q2T
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BU of 8q2t by Molmil
Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236)
Descriptor: 2-chloranyl-~{N}-methyl-9-(phenylmethyl)purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:2023-08-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236)
To Be Published

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