Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1DN6
DownloadVisualize
BU of 1dn6 by Molmil
THE CRYSTAL STRUCTURE OF D(GGATGGGAG). AN ESSENTIAL PART OF THE BINDING SITE FOR TRANSCRIPTION FACTOR IIIA
分子名称: DNA (5'-D(*CP*TP*CP*CP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*GP*GP*GP*AP*G)-3')
著者McCall, M, Brown, T, Hunter, W.N, Kennard, O.
登録日1987-05-11
公開日1988-01-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of d(GGATGGGAG): an essential part of the binding site for transcription factor IIIA.
Nature, 322, 1986
1TUQ
DownloadVisualize
BU of 1tuq by Molmil
NMR Structure Analysis of the B-DNA Dodecamer CTCtCACGTGGAG with a tricyclic cytosin base analogue
分子名称: 5'-D(P*CP*TP*CP*(TC1)P*AP*CP*GP*TP*GP*GP*AP*G)-3'
著者Engman, K.C, Sandin, P, Osborne, S, Brown, T, Billeter, M, Lincoln, P, Norden, B, Albinsson, B, Wilhelmsson, L.M.
登録日2004-06-25
公開日2004-10-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA adopts normal B-form upon incorporation of highly fluorescent DNA base analogue tC: NMR structure and UV-Vis spectroscopy characterization.
Nucleic Acids Res., 32, 2004
233D
DownloadVisualize
BU of 233d by Molmil
THE CRYSTAL STRUCTURE ANALYSIS OF D(CGCGAASSCGCG)2: A SYNTHETIC DNA DODECAMER DUPLEX CONTAINING FOUR 4'-THIO-2'-DEOXYTHYMIDINE NUCLEOTIDES
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*)-D(*(T49)P*(T49)P*)-D(*CP*GP*CP*G)-3')
著者Boggon, T.J, Hancox, E.L, McAuley-Hecht, K.E, Connolly, B.A, Hunter, W.N, Brown, T, Walker, R.T, Leonard, G.A.
登録日1995-10-16
公開日1996-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure analysis of d(CGCGAASSCGCG)2, a synthetic DNA dodecamer duplex containing four 4'-thio-2'-deoxythymidine nucleotides.
Nucleic Acids Res., 24, 1996
2ANA
DownloadVisualize
BU of 2ana by Molmil
THE CRYSTAL STRUCTURE OF D(G-G-G-G-C-C-C-C). A MODEL FOR POLY(DG).POLY(DC)
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*CP*CP*C)-3')
著者McCall, M, Brown, T, Kennard, O.
登録日1985-08-05
公開日1985-08-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of d(G-G-G-G-C-C-C-C). A model for poly(dG).poly(dC).
J.Mol.Biol., 183, 1985
2L8I
DownloadVisualize
BU of 2l8i by Molmil
A biocompatible backbone modification? - Structure and dynamics of a triazole-linked DNA duplex
分子名称: DNA (5'-D(*CP*GP*AP*CP*G*(2L8)P*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*AP*AP*AP*CP*GP*TP*CP*G)-3')
著者El-Sagheer, A, Brown, T, Ernsting, N, Dehmel, L, Griesinger, C, Mugge, C.
登録日2011-01-13
公開日2011-12-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of Triazole-Linked DNA: Biocompatibility Explained.
Chemistry, 17, 2011
404D
DownloadVisualize
BU of 404d by Molmil
CRYSTAL STRUCTURE OF THE RNA/DNA HYBRID R(GAAGAGAAGC). D(GCTTCTCTTC)
分子名称: 5'-D(*GP*CP*TP*TP*CP*TP*CP*TP*TP*C)-3', 5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'
著者Conn, G, Brown, T, Leonard, G.A.
登録日1998-06-12
公開日1998-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of the RNA/DNA hybrid r(GAAGAGAAGC). d(GCTTCTCTTC) shows significant differences to that found in solution.
Nucleic Acids Res., 27, 1999
4C5X
DownloadVisualize
BU of 4c5x by Molmil
Ultra High Resolution Dickerson-Drew dodecamer B-DNA with 5-Hydroxymethyl-cytosine Modification
分子名称: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*5HCP*GP*CP*GP)-3', MAGNESIUM ION
著者McDonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
登録日2013-09-16
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014
4C63
DownloadVisualize
BU of 4c63 by Molmil
ULTRA HIGH RESOLUTION DICKERSON-DREW DODECAMER B-DNA WITH 5- METHYLCYSTOSINE MODIFICATION
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*5CMP*GP*CP*GP)-3', MAGNESIUM ION
著者Mcdonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
登録日2013-09-17
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014
4C64
DownloadVisualize
BU of 4c64 by Molmil
ULTRA HIGH RESOLUTION DICKERSON-DREW DODECAMER B-DNA
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*GP)-3', MAGNESIUM ION
著者Mcdonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
登録日2013-09-17
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014
2X71
DownloadVisualize
BU of 2x71 by Molmil
Structural basis for the interaction of lactivicins with serine beta- lactamases
分子名称: (2E)-2-{[(2S)-2-(ACETYLAMINO)-2-CARBOXYETHOXY]IMINO}PENTANEDIOIC ACID, BETA-LACTAMASE, ETHANOL, ...
著者Sauvage, E, Herman, R, Kerff, F, Rocaboy, M, Charlier, P.
登録日2010-02-22
公開日2010-07-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for the Interaction of Lactivicins with Serine Beta-Lactamases.
J.Med.Chem., 53, 2010
7NRO
DownloadVisualize
BU of 7nro by Molmil
Crystal structure of AlkB in complex with manganese and N-(4-((6-((carboxymethyl)carbamoyl)-5-hydroxypyridin-2-yl)amino)phenyl)-N-oxohydroxylammonium
分子名称: 2-[[6-[(4-nitrophenyl)amino]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid, Alpha-ketoglutarate-dependent dioxygenase AlkB, MANGANESE (II) ION
著者Shishodia, S, Maheswaran, P, Leissing, T, Aik, W.S, McDonough, M.A, Schofield, C.J.
登録日2021-03-04
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structure-Based Design of Selective Fat Mass and Obesity Associated Protein (FTO) Inhibitors.
J.Med.Chem., 64, 2021
1D63
DownloadVisualize
BU of 1d63 by Molmil
CRYSTAL STRUCTURE OF A BERENIL-D(CGCAAATTTGCG) COMPLEX; AN EXAMPLE OF DRUG-DNA RECOGNITION BASED ON SEQUENCE-DEPENDENT STRUCTURAL FEATURES
分子名称: BERENIL, DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION
著者Brown, D.G, Sanderson, M.R, Garman, E, Neidle, S.
登録日1992-03-02
公開日1993-01-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a berenil-d(CGCAAATTTGCG) complex. An example of drug-DNA recognition based on sequence-dependent structural features.
J.Mol.Biol., 226, 1992
4QHO
DownloadVisualize
BU of 4qho by Molmil
Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with CCO10
分子名称: Alpha-ketoglutarate-dependent dioxygenase FTO, N-{[3-hydroxy-6-(naphthalen-1-yl)pyridin-2-yl]carbonyl}glycine, ZINC ION
著者Aik, W.S, Clunie-O'Connor, C, McDonough, M.A, Schofield, C.J.
登録日2014-05-28
公開日2015-06-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Structure-Based Design of Selective Fat Mass and Obesity Associated Protein (FTO) Inhibitors.
J.Med.Chem., 64, 2021
1AO9
DownloadVisualize
BU of 1ao9 by Molmil
INTRAMOLECULAR DNA DUPLEX CONTAINING A NON-NUCLEOTIDE LINKER (GAGAGA-X-TCTCCT), NMR, 12 STRUCTURES
分子名称: DNA (5'-D(*GP*AP*GP*AP*GP*AP*DOP*TP*CP*TP*CP*TP*C)-3')
著者Bartley, J.P.
登録日1997-07-22
公開日1998-01-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution conformation of an intramolecular DNA triplex containing a nonnucleotide linker: comparison with the DNA duplex.
Biochemistry, 36, 1997
1AT4
DownloadVisualize
BU of 1at4 by Molmil
INTRAMOLECULAR DNA TRIPLEX CONTAINING A NON-NUCLEOTIDE LINKER (GAGAGA-X-TCTCCT-X-CTCTCT), NMR, 7 STRUCTURES
分子名称: DNA (5'-D(*GP*AP*GP*AP*GP*AP*DOP*TP*CP*TP*CP*TP*CP*DOP*CP*TP*CP*TP*CP*T)-3')
著者Bartley, J.P.
登録日1997-08-18
公開日1998-02-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution conformation of an intramolecular DNA triplex containing a nonnucleotide linker: comparison with the DNA duplex.
Biochemistry, 36, 1997
1LAU
DownloadVisualize
BU of 1lau by Molmil
URACIL-DNA GLYCOSYLASE
分子名称: DNA (5'-D(*TP*TP*T)-3'), PROTEIN (URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-))
著者Pearl, L.H, Savva, R.
登録日1996-01-03
公開日1996-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis of specific base-excision repair by uracil-DNA glycosylase.
Nature, 373, 1995
2WPW
DownloadVisualize
BU of 2wpw by Molmil
Tandem GNAT protein from the clavulanic acid biosynthesis pathway (without AcCoA)
分子名称: ACETYL COENZYME *A, ORF14
著者Iqbal, A, Arunlanantham, H, McDonough, M.A, Chowdhury, R, Clifton, I.J.
登録日2009-08-11
公開日2009-12-29
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystallographic and mass spectrometric analyses of a tandem GNAT protein from the clavulanic acid biosynthesis pathway.
Proteins, 78, 2010
2WPX
DownloadVisualize
BU of 2wpx by Molmil
Tandem GNAT protein from the clavulanic acid biosynthesis pathway (with AcCoA)
分子名称: ACETYL COENZYME *A, GLYCEROL, ORF14
著者Iqbal, A, Arunlanantham, H, McDonough, M.A, Chowdhury, R, Clifton, I.J.
登録日2009-08-11
公開日2009-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystallographic and mass spectrometric analyses of a tandem GNAT protein from the clavulanic acid biosynthesis pathway.
Proteins, 78, 2010
1UDH
DownloadVisualize
BU of 1udh by Molmil
THE STRUCTURAL BASIS OF SPECIFIC BASE EXCISION REPAIR BY URACIL-DNA GLYCOSYLASE
分子名称: SULFATE ION, URACIL, URACIL-DNA GLYCOSYLASE
著者Pearl, L.H, Savva, R.
登録日1995-10-30
公開日1996-03-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structural basis of specific base-excision repair by uracil-DNA glycosylase.
Nature, 373, 1995
1UDG
DownloadVisualize
BU of 1udg by Molmil
THE STRUCTURAL BASIS OF SPECIFIC BASE EXCISION REPAIR BY URACIL-DNA GLYCOSYLASE
分子名称: SULFATE ION, URACIL-DNA GLYCOSYLASE
著者Pearl, L.H, Savva, R.
登録日1995-06-23
公開日1996-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structural basis of specific base-excision repair by uracil-DNA glycosylase.
Nature, 373, 1995
4II9
DownloadVisualize
BU of 4ii9 by Molmil
Crystal structure of Weissella viridescens FemXVv non-ribosomal amino acid transferase in complex with a peptidyl-RNA conjugate
分子名称: 5-mer peptide, FemX, GLYCEROL, ...
著者Li de la Sierra-Gallay, I, Fonvielle, M, van Tilbeurgh, H, Arthur, M, Etheve-Quelquejeu, M.
登録日2012-12-20
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献The Structure of FemXWv in Complex with a Peptidyl-RNA Conjugate: Mechanism of Aminoacyl Transfer from Ala-tRNA(Ala) to Peptidoglycan Precursors
Angew.Chem.Int.Ed.Engl., 52, 2013
7E8Z
DownloadVisualize
BU of 7e8z by Molmil
Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with SS81
分子名称: 2-[[6-[(4-nitrophenyl)amino]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, ZINC ION
著者Tam, N.Y, Ng, Y.M, Shishodia, S, McDonough, M.A, Schofield, C.J, Aik, W.S.
登録日2021-03-03
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure-Based Design of Selective Fat Mass and Obesity Associated Protein (FTO) Inhibitors.
J.Med.Chem., 64, 2021
1LVL
DownloadVisualize
BU of 1lvl by Molmil
THE REFINED STRUCTURE OF PSEUDOMONAS PUTIDA LIPOAMIDE DEHYDROGENASE COMPLEXED WITH NAD+ AT 2.45 ANGSTROMS RESOLUTION
分子名称: DIHYDROLIPOAMIDE DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Mattevi, A, Hol, W.G.J.
登録日1992-12-16
公開日1994-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The refined crystal structure of Pseudomonas putida lipoamide dehydrogenase complexed with NAD+ at 2.45 A resolution.
Proteins, 13, 1992
1UDI
DownloadVisualize
BU of 1udi by Molmil
NUCLEOTIDE MIMICRY IN THE CRYSTAL STRUCTURE OF THE URACIL-DNA GLYCOSYLASE-URACIL GLYCOSYLASE INHIBITOR PROTEIN COMPLEX
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
著者Pearl, L.H, Savva, R.
登録日1995-10-30
公開日1996-03-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Nucleotide mimicry in the crystal structure of the uracil-DNA glycosylase-uracil glycosylase inhibitor protein complex.
Nat.Struct.Biol., 2, 1995
<123

 

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon