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PDB: 8 results

2L8I
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A biocompatible backbone modification? - Structure and dynamics of a triazole-linked DNA duplex
Descriptor: DNA (5'-D(*CP*GP*AP*CP*G*(2L8)P*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*AP*AP*AP*CP*GP*TP*CP*G)-3')
Authors:El-Sagheer, A, Brown, T, Ernsting, N, Dehmel, L, Griesinger, C, Mugge, C.
Deposit date:2011-01-13
Release date:2011-12-28
Method:SOLUTION NMR
Cite:Structure and Dynamics of Triazole-Linked DNA: Biocompatibility Explained.
Chemistry, 17, 2011
7OZZ
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The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification
Descriptor: DNA (5'-D(*CP*TP*(05H)P*TP*CP*TP*TP*TP*G)-3'), POTASSIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-06-29
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7NRP
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The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG
Descriptor: CACODYLATE ION, DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3'), RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-03-04
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OOO
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BU of 7ooo by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification
Descriptor: DNA (5'-D(*CP*TP*(05A)P*TP*CP*TP*TP*TP*G)-3'), MAGNESIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-05-28
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OOS
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BU of 7oos by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG
Descriptor: DNA (5'-D(*CP*TP*(05K)P*TP*CP*TP*TP*TP*G)-3'), RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), STRONTIUM ION
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-05-28
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
4C5X
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BU of 4c5x by Molmil
Ultra High Resolution Dickerson-Drew dodecamer B-DNA with 5-Hydroxymethyl-cytosine Modification
Descriptor: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*5HCP*GP*CP*GP)-3', MAGNESIUM ION
Authors:McDonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
Deposit date:2013-09-16
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014
4C63
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ULTRA HIGH RESOLUTION DICKERSON-DREW DODECAMER B-DNA WITH 5- METHYLCYSTOSINE MODIFICATION
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*5CMP*GP*CP*GP)-3', MAGNESIUM ION
Authors:Mcdonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
Deposit date:2013-09-17
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014
4C64
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BU of 4c64 by Molmil
ULTRA HIGH RESOLUTION DICKERSON-DREW DODECAMER B-DNA
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*GP)-3', MAGNESIUM ION
Authors:Mcdonough, M, El-Sagheer, A.H, Brown, T, Schofield, C.J.
Deposit date:2013-09-17
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural insights into how 5-hydroxymethylation influences transcription factor binding.
Chem. Commun. (Camb.), 50, 2014

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