Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3DRG
DownloadVisualize
BU of 3drg by Molmil
Lactococcal OppA complexed with bradykinin in the closed conformation
分子名称: Bradykinin, CHLORIDE ION, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRK
DownloadVisualize
BU of 3drk by Molmil
Crystal structure of Lactococcal OppA co-crystallized with Neuropeptide S in an open conformation
分子名称: Neuropeptide S, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRI
DownloadVisualize
BU of 3dri by Molmil
Crystal structure of Lactococcal OppA co-crystallized with an octamer peptide in an open conformation
分子名称: Oligopeptide-binding protein oppA, peptide AASASA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRJ
DownloadVisualize
BU of 3drj by Molmil
Crystal structure of Lactococcal OppA co-crystallized with pTH-related peptide in an open conformation
分子名称: Oligopeptide-binding protein oppA, pTH-related peptide
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRH
DownloadVisualize
BU of 3drh by Molmil
Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation
分子名称: Oligopeptide-binding protein oppA, peptide AAAAAA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRF
DownloadVisualize
BU of 3drf by Molmil
Lactococcal OppA complexed with an endogenous peptide in the closed conformation
分子名称: Oligopeptide-binding protein oppA, endogenous peptide
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
8S0U
DownloadVisualize
BU of 8s0u by Molmil
Structure of the LytM domain of PrgK from E. faecalis
分子名称: PrgK
著者Sun, W.-S, Berntsson, R.P.-A.
登録日2024-02-14
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Breaking Barriers: pCF10 Type 4 Secretion System relies on a self-regulating muramidase to modulate the cell wall
To Be Published
5LV0
DownloadVisualize
BU of 5lv0 by Molmil
Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product
分子名称: CHLORIDE ION, GLY-VAL-VAL amyloid 35-40 fragment, Neurolysin, ...
著者Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P.
登録日2016-09-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network
To Be Published
3FTO
DownloadVisualize
BU of 3fto by Molmil
Crystal structure of OppA in a open conformation
分子名称: Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Oktaviani, N.A, Fusetti, F, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2009-01-13
公開日2009-03-31
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Selenomethionine incorporation in proteins expressed in Lactococcus lactis.
Protein Sci., 18, 2009
4DVE
DownloadVisualize
BU of 4dve by Molmil
Crystal structure at 2.1 A of the S-component for biotin from an ECF-type ABC transporter
分子名称: BIOTIN, Biotin transporter BioY, nonyl beta-D-glucopyranoside
著者Berntsson, R.P.-A, ter Beek, J, Majsnerowska, M, Duurkens, R, Puri, P, Poolman, B, Slotboom, D.J.
登録日2012-02-23
公開日2012-08-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural divergence of paralogous S components from ECF-type ABC transporters.
Proc.Natl.Acad.Sci.USA, 109, 2012
5TPB
DownloadVisualize
BU of 5tpb by Molmil
Binding domain of BoNT/A complexed with ganglioside variant
分子名称: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Berntsson, R.P.-A, Svensson, L.M, Stenmark, P.
登録日2016-10-20
公開日2017-01-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A.
J. Am. Chem. Soc., 139, 2017
5TPC
DownloadVisualize
BU of 5tpc by Molmil
Binding domain of BoNT/A complexed with ganglioside
分子名称: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Berntsson, R.P.-A, Svensson, L.M, Stenmark, P.
登録日2016-10-20
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A.
J. Am. Chem. Soc., 139, 2017
4FAJ
DownloadVisualize
BU of 4faj by Molmil
Structure and mode of peptide binding of pheromone receptor PrgZ
分子名称: GLYCEROL, PrgZ, Sex pheromone cCF10, ...
著者Berntsson, R.P.-A, Schuurman-Wolters, G.K, Dunny, K, Slotboom, D.J, Poolman, B.
登録日2012-05-22
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Mode of Peptide Binding of Pheromone Receptor PrgZ.
J.Biol.Chem., 287, 2012
4ISR
DownloadVisualize
BU of 4isr by Molmil
Binding domain of Botulinum neurotoxin DC in complex with rat synaptotagmin II
分子名称: Neurotoxin, SULFATE ION, Synaptotagmin-2
著者Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P.
登録日2013-01-17
公開日2013-08-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II.
Structure, 21, 2013
4ISQ
DownloadVisualize
BU of 4isq by Molmil
Binding domain of Botulinum neurotoxin DC in complex with human synaptotagmin I
分子名称: GLYCEROL, Neurotoxin, SULFATE ION, ...
著者Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P.
登録日2013-01-17
公開日2013-08-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II.
Structure, 21, 2013
4KA8
DownloadVisualize
BU of 4ka8 by Molmil
Structure of Organellar OligoPeptidase
分子名称: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
著者Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
登録日2013-04-22
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
5LR0
DownloadVisualize
BU of 5lr0 by Molmil
Binding domain of Botulinum Neurotoxin DC in complex with SialylT
分子名称: Botulinum neurotoxin D/C protein, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ...
著者Berntsson, R.P.-A, Stenmark, P.
登録日2016-08-18
公開日2017-08-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structural basis for the unique ganglioside and cell membrane recognition mechanism of botulinum neurotoxin DC.
Nat Commun, 8, 2017
4KA7
DownloadVisualize
BU of 4ka7 by Molmil
Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate
分子名称: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
著者Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
登録日2013-04-22
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4LHF
DownloadVisualize
BU of 4lhf by Molmil
Crystal structure of a DNA binding protein from phage P2
分子名称: Regulatory protein cox
著者Berntsson, R.P.-A, Odegrip, R, Sehlen, W, Skaar, K, Svensson, L.M, Massad, T, Haggard-Ljungquist, E, Stenmark, P.
登録日2013-07-01
公開日2014-03-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural insight into DNA binding and oligomerization of the multifunctional Cox protein of bacteriophage P2.
Nucleic Acids Res., 42, 2014
4N1U
DownloadVisualize
BU of 4n1u by Molmil
Structure of human MTH1 in complex with TH588
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine, SULFATE ION
著者Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
登録日2013-10-04
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
4N1T
DownloadVisualize
BU of 4n1t by Molmil
Structure of human MTH1 in complex with TH287
分子名称: 6-(2,3-dichlorophenyl)-N~4~-methylpyrimidine-2,4-diamine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
著者Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
登録日2013-10-04
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
3RYB
DownloadVisualize
BU of 3ryb by Molmil
Lactococcal OppA complexed with SLSQSLSQS
分子名称: Oligopeptide, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2011-05-11
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
J.Bacteriol., 193, 2011
3RYA
DownloadVisualize
BU of 3rya by Molmil
Lactococcal OppA complexed with SLSQLSSQS
分子名称: Oligopeptide, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2011-05-11
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
J.Bacteriol., 193, 2011
8A1B
DownloadVisualize
BU of 8a1b by Molmil
TraI trans-esterase domain from pKM101 (apo)
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
8A1C
DownloadVisualize
BU of 8a1c by Molmil
TraI trans-esterase domain from pKM101 (DNA bound)
分子名称: 11mer oriT DNA, MANGANESE (II) ION, TraI
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon