2R1C
 
 | | Coordinates of the thermus thermophilus ribosome binding factor A (RbfA) homology model as fitted into the CRYO-EM map of a 30S-RBFA complex | | Descriptor: | Ribosome-binding factor A | | Authors: | Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K. | | Deposit date: | 2007-08-22 | | Release date: | 2008-03-18 | | Last modified: | 2024-03-13 | | Method: | ELECTRON MICROSCOPY (12.5 Å) | | Cite: | Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
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1EG0
 | | FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME | | Descriptor: | FORMYL-METHIONYL-TRNA, FRAGMENT OF 16S RRNA HELIX 23, FRAGMENT OF 23S RRNA, ... | | Authors: | Gabashvili, I.S, Agrawal, R.K, Spahn, C.M.T, Grassucci, R.A, Svergun, D.I, Frank, J, Penczek, P. | | Deposit date: | 2000-02-11 | | Release date: | 2000-03-06 | | Last modified: | 2024-02-07 | | Method: | ELECTRON MICROSCOPY (11.5 Å) | | Cite: | Solution structure of the E. coli 70S ribosome at 11.5 A resolution.
Cell(Cambridge,Mass.), 100, 2000
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3IY9
 | | Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model | | Descriptor: | 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L16, ... | | Authors: | Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K. | | Deposit date: | 2009-04-20 | | Release date: | 2009-07-07 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (14.1 Å) | | Cite: | Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
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2BCW
 | | Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex | | Descriptor: | 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G | | Authors: | Datta, P.P, Sharma, M.R, Qi, L, Frank, J, Agrawal, R.K. | | Deposit date: | 2005-10-19 | | Release date: | 2005-12-20 | | Last modified: | 2024-02-14 | | Method: | ELECTRON MICROSCOPY (11.2 Å) | | Cite: | Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
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5G2Y
 | | Structure a of Group II Intron Complexed with its Reverse Transcriptase | | Descriptor: | GROUP II INTRON | | Authors: | Qu, G, Kaushal, P.S, Wang, J, Shigematsu, H, Piazza, C.L, Agrawal, R.K, Belfort, M, Wang, H.W. | | Deposit date: | 2016-04-16 | | Release date: | 2016-05-04 | | Last modified: | 2016-06-22 | | Method: | ELECTRON MICROSCOPY (4.5 Å) | | Cite: | Structure of a Group II Intron in Complex with its Reverse Transcriptase.
Nat.Struct.Mol.Biol., 23, 2016
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5G2X
 | | Structure a of Group II Intron Complexed with its Reverse Transcriptase | | Descriptor: | 5'-R(*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*CP)-3', GROUP II INTRON, GROUP II INTRON-ENCODED PROTEIN LTRA | | Authors: | Qu, G, Kaushal, P.S, Wang, J, Shigematsu, H, Piazza, C.L, Agrawal, R.K, Belfort, M, Wang, H.W. | | Deposit date: | 2016-04-16 | | Release date: | 2016-05-11 | | Last modified: | 2016-06-22 | | Method: | ELECTRON MICROSCOPY (3.8 Å) | | Cite: | Structure of a Group II Intron in Complex with its Reverse Transcriptase.
Nat.Struct.Mol.Biol., 23, 2016
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3IZZ
 | | Models for ribosome components that are nearest neighbors to the bovine mitochondrial initiation factor2 bound to the E. Coli ribosome | | Descriptor: | Helix 18 (Small Subunit), Helix 44 (Small Subunit), Helix 5, ... | | Authors: | Yassin, A.S, Haque, E, Datta, P.P, Elmore, K, Banavali, N.K, Spremulli, L.L, Agrawal, R.K. | | Deposit date: | 2011-01-20 | | Release date: | 2011-03-30 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (10.8 Å) | | Cite: | Insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1.
Proc.Natl.Acad.Sci.USA, 108, 2011
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3J0E
 | | Models for the T. thermophilus ribosome recycling factor and the E. coli elongation factor G bound to the E. coli post-termination complex | | Descriptor: | 30S ribosomal protein S12, Elongation factor G, Ribosome-recycling factor, ... | | Authors: | Yokoyama, T, Shaikh, T.R, Iwakura, N, Kaji, H, Kaji, A, Agrawal, R.K. | | Deposit date: | 2011-06-29 | | Release date: | 2012-04-25 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (9.9 Å) | | Cite: | Structural insights into initial and intermediate steps of the ribosome-recycling process.
Embo J., 31, 2012
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3IY8
 | | Leishmania tarentolae Mitonchondrial Ribosome small subunit | | Descriptor: | 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S15, ... | | Authors: | Sharma, M.R, Booth, T.M, Simpson, L, Maslov, D.A, Agrawal, R.K. | | Deposit date: | 2009-04-16 | | Release date: | 2009-07-07 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (14.1 Å) | | Cite: | Structure of a mitochondrial ribosome with minimal RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
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3J0D
 | | Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex | | Descriptor: | 30S ribosomal protein S12, 50S ribosomal protein L11, Ribosome-recycling factor, ... | | Authors: | Yokoyama, T, Shaikh, T.R, Iwakura, N, Kaji, H, Kaji, A, Agrawal, R.K. | | Deposit date: | 2011-06-29 | | Release date: | 2012-04-25 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (11.1 Å) | | Cite: | Structural insights into initial and intermediate steps of the ribosome-recycling process.
Embo J., 31, 2012
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3IZY
 | | Mammalian mitochondrial translation initiation factor 2 | | Descriptor: | Translation initiation factor IF-2, mitochondrial, tRNA-Phe | | Authors: | Yassin, A.S, Haque, E, Datta, P.P, Elmore, K, Banavali, N.K, Spremulli, L.L, Agrawal, R.K. | | Deposit date: | 2011-01-19 | | Release date: | 2011-03-23 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (10.8 Å) | | Cite: | Insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1
Proc.Natl.Acad.Sci.USA, 108, 2011
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3JD5
 | | Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome | | Descriptor: | 28S ribosomal RNA, mitochondial, 28S ribosomal protein S10, ... | | Authors: | Kaushal, P.S, Sharma, M.R, Booth, T.M, Haque, E.M, Tung, C.S, Sanbonmatsu, K.Y, Spremulli, L.L, Agrawal, R.K. | | Deposit date: | 2016-04-08 | | Release date: | 2016-07-13 | | Last modified: | 2018-07-18 | | Method: | ELECTRON MICROSCOPY (7 Å) | | Cite: | Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome.
Proc.Natl.Acad.Sci.USA, 111, 2014
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2FTC
 | | Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome | | Descriptor: | 39S ribosomal protein L11, mitochondrial, 39S ribosomal protein L12, ... | | Authors: | Mears, J.A, Sharma, M.R, Gutell, R.R, Richardson, P.E, Agrawal, R.K, Harvey, S.C. | | Deposit date: | 2006-01-24 | | Release date: | 2006-04-11 | | Last modified: | 2024-02-14 | | Method: | ELECTRON MICROSCOPY (12.1 Å) | | Cite: | A Structural Model for the Large Subunit of the Mammalian Mitochondrial Ribosome
J.Mol.Biol., 358, 2006
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7L20
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6NF8
 | | Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -Class I | | Descriptor: | 28S ribosomal RNA, mitochondria, 28S ribosomal protein S10, ... | | Authors: | Sharma, M, Koripella, R, Agrawal, R. | | Deposit date: | 2018-12-19 | | Release date: | 2019-02-27 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (3.48 Å) | | Cite: | Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
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6NEQ
 | | Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit-Class-II | | Descriptor: | 28S ribosomal RNA, mitochondrial, 28S ribosomal protein S10, ... | | Authors: | Sharma, M, Koripella, R, Agrawal, R. | | Deposit date: | 2018-12-18 | | Release date: | 2019-02-27 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (3.32 Å) | | Cite: | Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
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2DYJ
 | | Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8 | | Descriptor: | Ribosome-binding factor A | | Authors: | Kawazoe, M, Takemoto, C, Nakayama-Ushikoshi, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-09-14 | | Release date: | 2007-03-14 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (1.84 Å) | | Cite: | Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
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4V4B
 | | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. | | Descriptor: | 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S11, ... | | Authors: | Spahn, C.M, Gomez-Lorenzo, M.G, Grassucci, R.A, Jorgensen, R, Andersen, G.R, Beckmann, R, Penczek, P.A, Ballesta, J.P.G, Frank, J. | | Deposit date: | 2004-01-06 | | Release date: | 2014-07-09 | | Last modified: | 2024-02-28 | | Method: | ELECTRON MICROSCOPY (11.7 Å) | | Cite: | Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.
Embo J., 23, 2004
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1ZN1
 | | Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex | | Descriptor: | 30S ribosomal protein S12, Ribosome recycling factor, ribosomal 16S RNA, ... | | Authors: | Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J. | | Deposit date: | 2005-05-11 | | Release date: | 2005-06-14 | | Last modified: | 2024-02-14 | | Method: | ELECTRON MICROSCOPY (14.1 Å) | | Cite: | Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
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1ZC8
 | | Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex | | Descriptor: | Elongation factor Tu, H2 16S rRNA, H2b d mRNA, ... | | Authors: | Valle, M, Gillet, R, Kaur, S, Henne, A, Ramakrishnan, V, Frank, J. | | Deposit date: | 2005-04-11 | | Release date: | 2005-04-19 | | Last modified: | 2024-02-14 | | Method: | ELECTRON MICROSCOPY (13 Å) | | Cite: | Visualizing tmRNA Entry into a Stalled Ribosome
Science, 300, 2003
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