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PDB: 15 results

5Z47
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BU of 5z47 by Molmil
Crystal structure of pyrrolidone carboxylate peptidase I with disordered loop A from Deinococcus radiodurans R1
Descriptor: DIMETHYL SULFOXIDE, Pyrrolidone-carboxylate peptidase
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2018-01-10
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of pyrrolidone-carboxylate peptidase I from Deinococcus radiodurans reveal the mechanism of L-pyroglutamate recognition.
Acta Crystallogr D Struct Biol, 75, 2019
5Z48
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BU of 5z48 by Molmil
Crystal structure of pyrrolidone carboxylate peptidase I from Deinococcus radiodurans R1 bound to pyroglutamate
Descriptor: DIMETHYL SULFOXIDE, PYROGLUTAMIC ACID, Pyrrolidone-carboxylate peptidase, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2018-01-10
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Crystal structures of pyrrolidone-carboxylate peptidase I from Deinococcus radiodurans reveal the mechanism of L-pyroglutamate recognition.
Acta Crystallogr D Struct Biol, 75, 2019
6IFF
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BU of 6iff by Molmil
Crystal structure of M1 zinc metallopeptidase E323A mutant from Deinococcus radiodurans
Descriptor: SODIUM ION, TYROSINE, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Gaur, N.K, Makde, R.D.
Deposit date:2018-09-20
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KP1
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BU of 6kp1 by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-methionine amino acid
Descriptor: METHIONINE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KP0
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BU of 6kp0 by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-arginine
Descriptor: ARGININE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KOZ
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BU of 6koz by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323 mutant bound to L-Leucine amino acid
Descriptor: LEUCINE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KOY
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BU of 6koy by Molmil
Crystal structure of two domain M1 Zinc metallopeptidase E323A mutant bound to L-tryptophan amino acid
Descriptor: TRYPTOPHAN, ZINC ION, Zinc metalloprotease
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
5Z40
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BU of 5z40 by Molmil
Crystal structure of pyrrolidone carboxylate peptidase I from Deionococcus radiodurans R1
Descriptor: Pyrrolidone-carboxylate peptidase
Authors:Agrawal, R, Kumar, A, Makde, R.D.
Deposit date:2018-01-09
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.837 Å)
Cite:Crystal structures of pyrrolidone carboxylate peptidase I from Deionococcus radiodurans reveal the mechanism of L-pyroglutamate recognition
To Be Published
6A8Z
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BU of 6a8z by Molmil
Crystal structure of M1 zinc metallopeptidase from Deinococcus radiodurans
Descriptor: SODIUM ION, TYROSINE, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Makde, R.D.
Deposit date:2018-07-11
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.045 Å)
Cite:Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain.
J.Struct.Biol., 208, 2019
6IFG
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BU of 6ifg by Molmil
Crystal structure of M1 zinc metallopeptidase E323A mutant bound to Tyr-ser-ala substrate from Deinococcus radiodurans
Descriptor: FORMIC ACID, Tripeptides (TYR-SER-ALA), ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2018-09-20
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain.
J.Struct.Biol., 208, 2019
6NF8
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BU of 6nf8 by Molmil
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -Class I
Descriptor: 28S ribosomal RNA, mitochondria, 28S ribosomal protein S10, ...
Authors:Sharma, M, Koripella, R, Agrawal, R.
Deposit date:2018-12-19
Release date:2019-02-27
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
6NEQ
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BU of 6neq by Molmil
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit-Class-II
Descriptor: 28S ribosomal RNA, mitochondrial, 28S ribosomal protein S10, ...
Authors:Sharma, M, Koripella, R, Agrawal, R.
Deposit date:2018-12-18
Release date:2019-02-27
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
iScience, 12, 2019
7MQO
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BU of 7mqo by Molmil
The insulin receptor ectodomain in complex with a venom hybrid insulin analog - "head" region
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin A chain, ...
Authors:Blakely, A.D, Xiong, X, Kim, J.H, Menting, J, Schafer, I.B, Schubert, H.L, Agrawal, R, Gutmann, T, Delaine, C, Zhang, Y, Artik, G.O, Merriman, A, Eckert, D, Lawrence, M.C, Coskun, U, Fisher, S.J, Forbes, B.E, Safavi-Hemami, H, Hill, C.P, Chou, D.H.C.
Deposit date:2021-05-06
Release date:2022-03-16
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Symmetric and asymmetric receptor conformation continuum induced by a new insulin.
Nat.Chem.Biol., 18, 2022
7MQR
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BU of 7mqr by Molmil
The insulin receptor ectodomain in complex with four venom hybrid insulins - symmetric conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin A chain, Insulin B chain, ...
Authors:Blakely, A.D, Xiong, X, Kim, J.H, Menting, J, Schafer, I.B, Schubert, H.L, Agrawal, R, Gutmann, T, Delaine, C, Zhang, Y, Artik, G.O, Merriman, A, Eckert, D, Lawrence, M.C, Coskun, U, Fisher, S.J, Forbes, B.E, Safavi-Hemami, H, Hill, C.P, Chou, D.H.C.
Deposit date:2021-05-06
Release date:2022-03-16
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Symmetric and asymmetric receptor conformation continuum induced by a new insulin.
Nat.Chem.Biol., 18, 2022
7MQS
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BU of 7mqs by Molmil
The insulin receptor ectodomain in complex with three venom hybrid insulin molecules - asymmetric conformation
Descriptor: Insulin A chain, Insulin B chain, Isoform Short of Insulin receptor
Authors:Blakely, A.D, Xiong, X, Kim, J.H, Menting, J, Schafer, I.B, Schubert, H.L, Agrawal, R, Gutmann, T, Delaine, C, Zhang, Y, Artik, G.O, Merriman, A, Eckert, D, Lawrence, M.C, Coskun, U, Fisher, S.J, Forbes, B.E, Safavi-Hemami, H, Hill, C.P, Chou, D.H.C.
Deposit date:2021-05-06
Release date:2022-03-16
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Symmetric and asymmetric receptor conformation continuum induced by a new insulin.
Nat.Chem.Biol., 18, 2022

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