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7D63
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BU of 7d63 by Molmil
Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Zhang, J, An, W, Ye, K.
登録日2020-09-29
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (12.3 Å)
主引用文献Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
To Be Published
7D5T
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BU of 7d5t by Molmil
Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Zhang, J, An, W, Ye, K.
登録日2020-09-28
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
To Be Published
7D5S
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BU of 7d5s by Molmil
Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S12, ...
著者Du, Y, Zhang, J, An, W, Ye, K.
登録日2020-09-28
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)
To Be Published
7D4I
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BU of 7d4i by Molmil
Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Zhang, J, An, W, Ye, K.
登録日2020-09-24
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1
To Be Published
2HVY
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BU of 2hvy by Molmil
Crystal structure of an H/ACA box RNP from Pyrococcus furiosus
分子名称: 50S ribosomal protein L7Ae, ADENOSINE-5'-TRIPHOSPHATE, H/ACA RNA, ...
著者Ye, K.
登録日2006-07-31
公開日2006-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of an H/ACA box ribonucleoprotein particle
Nature, 443, 2006
3UAI
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BU of 3uai by Molmil
Structure of the Shq1-Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae
分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 3, H/ACA ribonucleoprotein complex subunit 4, ...
著者Ye, K.
登録日2011-10-21
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita
Embo J., 30, 2011
3U28
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BU of 3u28 by Molmil
Crystal structure of a Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae
分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 3, H/ACA ribonucleoprotein complex subunit 4
著者Ye, K, Li, S.
登録日2011-10-02
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase
Genes Dev., 25, 2011
3UAH
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BU of 3uah by Molmil
Structure of the Shq1 specific domain from Saccharomyces cerevisiae
分子名称: Protein SHQ1
著者Ye, K.
登録日2011-10-21
公開日2011-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita
Embo J., 30, 2011
5LU8
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BU of 5lu8 by Molmil
CRYSTAL STRUCTURE OF YVAD-CMK BOUND HUMAN LEGUMAIN (AEP) IN COMPLEX WITH COMPOUND 11B
分子名称: 2,4-di(morpholin-4-yl)aniline, 2-acetamido-2-deoxy-beta-D-glucopyranose, AC-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, ...
著者Dall, E, Ye, K, Brandstetter, H.
登録日2016-09-08
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
4JDE
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BU of 4jde by Molmil
Crystal structure of PUD-1/PUD-2 heterodimer
分子名称: CHLORIDE ION, GLYCEROL, Protein F15E11.1, ...
著者Luo, S, Ye, K.
登録日2013-02-25
公開日2013-11-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of PUD-1 and PUD-2, two proteins up-regulated in a long-lived daf-2 mutant.
Plos One, 8, 2013
3PLA
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BU of 3pla by Molmil
Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus
分子名称: 50S ribosomal protein L7Ae, C/D guide RNA, Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, ...
著者Lin, J, Lai, S, Jia, R, Xu, A, Zhang, L, Lu, J, Ye, K.
登録日2010-11-15
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural basis for site-specific ribose methylation by box C/D RNA protein complexes.
Nature, 469, 2011
3TBO
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BU of 3tbo by Molmil
Crystal structure of a type 3 CDGSH iron-sulfur protein.
分子名称: FE2/S2 (INORGANIC) CLUSTER, Zinc finger, CDGSH-type domain protein
著者Lin, J, Zhang, L, Ye, K.
登録日2011-08-07
公開日2011-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
3TBN
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BU of 3tbn by Molmil
Crystal structure of a miner2 homolog: a type 6 CDGSH iron-sulfur protein.
分子名称: FE2/S2 (INORGANIC) CLUSTER, Putative uncharacterized protein
著者Lin, J, Zhang, L, Ye, K.
登録日2011-08-07
公開日2011-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
3TBM
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BU of 3tbm by Molmil
Crystal structure of a type 4 CDGSH iron-sulfur protein.
分子名称: FE2/S2 (INORGANIC) CLUSTER, L(+)-TARTARIC ACID, NONAETHYLENE GLYCOL, ...
著者Lin, J, Zhang, L, Ye, K.
登録日2011-08-07
公開日2011-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Structure and Molecular Evolution of CDGSH Iron-Sulfur Domains.
Plos One, 6, 2011
5LUA
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BU of 5lua by Molmil
Crystal structure of human legumain (AEP) in complex with compound 11b
分子名称: 2,4-di(morpholin-4-yl)aniline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dall, E, Ye, K, Brandstetter, H.
登録日2016-09-08
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
5LUB
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BU of 5lub by Molmil
Crystal structure of human legumain (AEP) in complex with compound 11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine, ...
著者Dall, E, Ye, K, Brandstetter, H.
登録日2016-09-08
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
5LU9
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BU of 5lu9 by Molmil
Crystal structure of YVAD-cmk bound human legumain (AEP) in complex with compound 11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine, AC-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, ...
著者Dall, E, Ye, K, Brandstetter, H.
登録日2016-09-08
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
4J0X
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BU of 4j0x by Molmil
Structure of Rrp9
分子名称: Ribosomal RNA-processing protein 9
著者Zhang, L, Lin, J, Ye, K.
登録日2013-01-31
公開日2013-06-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
4J0W
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BU of 4j0w by Molmil
Structure of U3-55K
分子名称: U3 small nucleolar RNA-interacting protein 2
著者Zhang, L, Lin, J, Ye, K.
登録日2013-01-31
公開日2013-06-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
6SES
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BU of 6ses by Molmil
Tubulin-B2 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Guo, B, Rodriguez-Gabin, A, Prota, A.E, Muehlethaler, T, Zhang, N, Ye, K, Steinmetz, M.O, Band Horwitz, S, Smith III, A.B, McDaid, H.M.
登録日2019-07-30
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Refinement of the Tubulin Ligand (+)-Discodermolide to Attenuate Chemotherapy-Mediated Senescence.
Mol.Pharmacol., 98, 2020
4M5D
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BU of 4m5d by Molmil
Crystal structure of the Utp22 and Rrp7 complex from Saccharomyces cerevisiae
分子名称: Ribosomal RNA-processing protein 7, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Lin, J, Ye, K.
登録日2013-08-08
公開日2013-11-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献An RNA-Binding Complex Involved in Ribosome Biogenesis Contains a Protein with Homology to tRNA CCA-Adding Enzyme.
Plos Biol., 11, 2013
4MJ7
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BU of 4mj7 by Molmil
Crystal structure of the PIN domain of Saccharomyces cerevisiae Utp23
分子名称: ZINC ION, rRNA-processing protein UTP23
著者Lu, J, Ye, K.
登録日2013-09-03
公開日2013-11-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural and functional analysis of Utp23, a yeast ribosome synthesis factor with degenerate PIN domain
Rna, 19, 2013
4WNZ
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BU of 4wnz by Molmil
Crystal structure of Pyrococcus furiosus Cmr4 (Cas7)
分子名称: CRISPR system Cmr subunit Cmr4
著者Zhu, X, Ye, K.
登録日2014-10-15
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cmr4 is the slicer in the RNA-targeting Cmr CRISPR complex
Nucleic Acids Res., 43, 2015
5YAX
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BU of 5yax by Molmil
Crystal structure of a human neutralizing antibody bound to a HBV preS1 peptide
分子名称: Large envelope protein, SODIUM ION, scFv1 antibody
著者Liu, X, Zheng, S, Ye, K, Sui, J.
登録日2017-09-02
公開日2017-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A potent human neutralizing antibody Fc-dependently reduces established HBV infections
Elife, 6, 2017
4NSX
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BU of 4nsx by Molmil
Crystal Structure of the Utp21 tandem WD Domain
分子名称: CITRATE ANION, U3 small nucleolar RNA-associated protein 21
著者Zhang, C, Ye, K.
登録日2013-11-29
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Utp21 Tandem WD Domain Provides Insight into the Organization of the UTPB Complex Involved in Ribosome Synthesis
Plos One, 9, 2014

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