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7WRO
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BU of 7wro by Molmil
Local structure of BD55-3372 and delta spike
Descriptor: 3372H, 3372L, Spike protein S1
Authors:Liu, P.L.
Deposit date:2022-01-27
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.
Nature, 608, 2022
8XY7
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BU of 8xy7 by Molmil
hPhK alpha-gamma subcomplex in active state
Descriptor: FARNESYL, Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8XYB
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BU of 8xyb by Molmil
hPhK gamma-delta subcomplex in inactive state
Descriptor: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
8XYA
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BU of 8xya by Molmil
hPhK alpha-beta-gamma-delta subcomplex in inactive state
Descriptor: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ...
Authors:Yang, X.K, Xiao, J.Y.
Deposit date:2024-01-19
Release date:2024-04-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Architecture and activation of human muscle phosphorylase kinase.
Nat Commun, 15, 2024
5Y92
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BU of 5y92 by Molmil
Crystal structure of ANXUR2 extracellular domain from Arabidopsis thaliana
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor-like protein kinase ANXUR2, ...
Authors:Du, S, Xiao, J.Y.
Deposit date:2017-08-22
Release date:2018-02-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structures of the extracellular domains of the CrRLK1L receptor-like kinases ANXUR1 and ANXUR2
Protein Sci., 27, 2018
5Y96
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BU of 5y96 by Molmil
Crystal structure of ANXUR1 extracellular domain from Arabidopsis thaliana
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor-like protein kinase ANXUR1
Authors:Du, S, Xiao, J.Y.
Deposit date:2017-08-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the extracellular domains of the CrRLK1L receptor-like kinases ANXUR1 and ANXUR2
Protein Sci., 27, 2018
8H7Z
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BU of 8h7z by Molmil
Cryo-EM structure of SARS-CoV-2 BA.2 RBD in complex with BA7535 fab (local refinement)
Descriptor: BA7535 fab, Spike glycoprotein
Authors:Liu, Z, Yan, A, Gao, Y.
Deposit date:2022-10-21
Release date:2023-08-30
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Identification of a highly conserved neutralizing epitope within the RBD region of diverse SARS-CoV-2 variants.
Nat Commun, 15, 2024
8H7L
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BU of 8h7l by Molmil
Cryo-EM Structure of SARS-CoV-2 BA.2 Spike protein in complex with BA7535
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BA7535 fab heavt chain, ...
Authors:Liu, Z, Yan, A, Gao, Y.
Deposit date:2022-10-20
Release date:2023-08-30
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Identification of a highly conserved neutralizing epitope within the RBD region of diverse SARS-CoV-2 variants.
Nat Commun, 15, 2024
5ZTN
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BU of 5ztn by Molmil
The crystal structure of human DYRK2 in complex with Curcumin
Descriptor: (1Z,4Z,6E)-5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one, Dual specificity tyrosine-phosphorylation-regulated kinase 2
Authors:Ji, C.G, Xiao, J.Y.
Deposit date:2018-05-04
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Ancient drug curcumin impedes 26S proteasome activity by direct inhibition of dual-specificity tyrosine-regulated kinase 2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8X6B
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BU of 8x6b by Molmil
Crystal structure of immune receptor PVRIG in complex with ligand Nectin-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nectin-2, Transmembrane protein PVRIG
Authors:Hu, S.T, Han, P, Wang, H, Qi, J.X.
Deposit date:2023-11-21
Release date:2024-04-24
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the immune recognition and selectivity of the immune receptor PVRIG for ligand Nectin-2.
Structure, 32, 2024
7CH4
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BU of 7ch4 by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-604 Fab
Descriptor: BD-604 Fab H, BD-604 Fab L, Spike protein S1
Authors:Du, S, Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structurally Resolved SARS-CoV-2 Antibody Shows High Efficacy in Severely Infected Hamsters and Provides a Potent Cocktail Pairing Strategy.
Cell, 183, 2020
7CHC
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BU of 7chc by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-629 Fab and BD-368-2 Fab
Descriptor: BD-368-2 Fab H, BD-368-2 Fab L, BD-629 Fab H, ...
Authors:Du, S, Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structurally Resolved SARS-CoV-2 Antibody Shows High Efficacy in Severely Infected Hamsters and Provides a Potent Cocktail Pairing Strategy.
Cell, 183, 2020
7CH5
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BU of 7ch5 by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-629 Fab
Descriptor: BD-629 Fab H, BD-629 Fab L, Spike protein S1
Authors:Du, S, Xiao, J.Y.
Deposit date:2020-07-05
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structurally Resolved SARS-CoV-2 Antibody Shows High Efficacy in Severely Infected Hamsters and Provides a Potent Cocktail Pairing Strategy.
Cell, 183, 2020
7E7E
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BU of 7e7e by Molmil
The co-crystal structure of ACE2 with Fab
Descriptor: Processed angiotensin-converting enzyme 2, ZINC ION, h11B11-Fab
Authors:Xiao, J.Y, Zhang, Y.
Deposit date:2021-02-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A broadly neutralizing humanized ACE2-targeting antibody against SARS-CoV-2 variants.
Nat Commun, 12, 2021
8X5N
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BU of 8x5n by Molmil
Tetramer Gabija with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA, Gabija protein GajB, ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-17
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8WY4
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BU of 8wy4 by Molmil
GajA tetramer with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-10-30
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8X5I
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BU of 8x5i by Molmil
tetramer Gabija with ATP (local refinement)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA, MAGNESIUM ION
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-17
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8X51
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BU of 8x51 by Molmil
Cryo-EM structure of Gabija GajA in complex with DNA(focused refinement)
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*AP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*TP*AP*TP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*TP*AP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*TP*TP*TP*T)-3'), ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-16
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8WY5
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BU of 8wy5 by Molmil
Structure of Gabija GajA in complex with DNA
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*TP*AP*TP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*AP*TP*AP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*TP*TP*T)-3'), ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-10-30
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
3BM3
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BU of 3bm3 by Molmil
Restriction endonuclease PspGI-substrate DNA complex
Descriptor: CITRIC ACID, DNA (5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3'), ...
Authors:Szczepanowski, R.H, Carpenter, M, Czapinska, H, Tamulaitis, G, Siksnys, V, Bhagwat, A, Bochtler, M.
Deposit date:2007-12-12
Release date:2008-09-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A direct crystallographic demonstration that Type II restriction endonuclease PspGI flips nucleotides
To be Published
7BWN
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BU of 7bwn by Molmil
Crystal Structure of a Designed Protein Heterocatenane
Descriptor: Cellular tumor antigen p53, Chimera of Green fluorescent protein and p53dim
Authors:Liu, Y.J, Duan, Z.L, Fang, J, Zhang, F, Xiao, J.Y, Zhang, W.B.
Deposit date:2020-04-15
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Cellular Synthesis and X-ray Crystal Structure of a Designed Protein Heterocatenane.
Angew.Chem.Int.Ed.Engl., 59, 2020
8WHK
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BU of 8whk by Molmil
Crystal structure of CLASP2 in complex with LL5beta
Descriptor: CHLORIDE ION, CLIP-associating protein 2, Pleckstrin homology-like domain family B member 2
Authors:Jia, X, Wei, Z.
Deposit date:2023-09-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:CLASP-mediated competitive binding in protein condensates directs microtubule growth.
Nat Commun, 15, 2024
8WHJ
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BU of 8whj by Molmil
Crystal structure of CLASP2 TOG4 fused with LL5beta
Descriptor: CHLORIDE ION, CLIP-associating protein 2,Pleckstrin homology-like domain family B member 2, DI(HYDROXYETHYL)ETHER
Authors:Jia, X, Wei, Z.
Deposit date:2023-09-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:CLASP-mediated competitive binding in protein condensates directs microtubule growth.
Nat Commun, 15, 2024
8WHL
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BU of 8whl by Molmil
Crystal structure of CLASP2 in complex with CENP-E
Descriptor: ACETATE ION, CLIP-associating protein 2, Centromere-associated protein E, ...
Authors:Jia, X, Wei, Z.
Deposit date:2023-09-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:CLASP-mediated competitive binding in protein condensates directs microtubule growth.
Nat Commun, 15, 2024
8WHI
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BU of 8whi by Molmil
Crystal structure of native CLASP2 in complex with CLIP170
Descriptor: 1,2-ETHANEDIOL, CLIP-associating protein 2, CLIP1 protein, ...
Authors:Jin, G, Wei, Z.
Deposit date:2023-09-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:CLASP-mediated competitive binding in protein condensates directs microtubule growth.
Nat Commun, 15, 2024

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PDB entries from 2024-09-18

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