Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6XUT
DownloadVisualize
BU of 6xut by Molmil
Crystallographic structure of oligosaccharide dehydrogenase from Pycnoporus cinnabarinus, ligand-free form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Cerutti, G, Savino, C, Montemiglio, L.C, Sciara, G, Vallone, B.
Deposit date:2020-01-21
Release date:2021-02-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure and functional characterization of an oligosaccharide dehydrogenase from Pycnoporus cinnabarinus provides insights into fungal breakdown of lignocellulose.
Biotechnol Biofuels, 14, 2021
5MJC
DownloadVisualize
BU of 5mjc by Molmil
metNeuroglobin under oxygen at 50 bar
Descriptor: 1,4-DIETHYLENE DIOXIDE, Neuroglobin, OXYGEN MOLECULE, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P, Vallone, B.
Deposit date:2016-11-30
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
5MNS
DownloadVisualize
BU of 5mns by Molmil
Structural and functional characterization of OleP in complex with 6DEB in sodium formate
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Parisi, G, Savino, C, Montemiglio, L.C, Vallone, B.
Deposit date:2016-12-13
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Substrate-induced conformational change in cytochrome P450 OleP.
FASEB J., 33, 2019
7OHD
DownloadVisualize
BU of 7ohd by Molmil
CRYSTAL STRUCTURE OF FERRIC MURINE NEUROGLOBIN CDLESS MUTANT
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Exertier, C, Freda, I, Montemiglio, L.C, Savino, C, Cerutti, G, Gugole, E, Vallone, B.
Deposit date:2021-05-10
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the Role of Murine Neuroglobin CDloop-D-Helix Unit in CO Ligand Binding and Structural Dynamics.
Acs Chem.Biol., 17, 2022
1J7Y
DownloadVisualize
BU of 1j7y by Molmil
Crystal structure of partially ligated mutant of HbA
Descriptor: CARBON MONOXIDE, Hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Miele, A.E, Draghi, F, Arcovito, A, Bellelli, A, Brunori, M, Travaglini-Allocatelli, C, Vallone, B.
Deposit date:2001-05-19
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Control of heme reactivity by diffusion: structural basis and functional characterization in hemoglobin mutants.
Biochemistry, 40, 2001
1QI8
DownloadVisualize
BU of 1qi8 by Molmil
DEOXYGENATED STRUCTURE OF A DISTAL POCKET HEMOGLOBIN MUTANT
Descriptor: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miele, A.E, Vallone, B, Santanche, S, Travaglini-Allocatelli, C, Bellelli, A, Brunori, M.
Deposit date:1999-06-07
Release date:1999-07-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Modulation of ligand binding in engineered human hemoglobin distal pocket.
J.Mol.Biol., 290, 1999
6ZI7
DownloadVisualize
BU of 6zi7 by Molmil
Crystal structure of OleP-oleandolide(DEO) bound to L-rhamnose
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, FORMIC ACID, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Freda, I.
Deposit date:2020-06-25
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
6ZI3
DownloadVisualize
BU of 6zi3 by Molmil
Crystal structure of OleP-6DEB bound to L-rhamnose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Freda, I.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
6ZHZ
DownloadVisualize
BU of 6zhz by Molmil
OleP-oleandolide(DEO) in high salt crystallization conditions
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome P-450, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Cecchetti, C.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
6ZI2
DownloadVisualize
BU of 6zi2 by Molmil
OleP-oleandolide(DEO) in low salt crystallization conditions
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Parisi, G, Cecchetti, C.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
1MYZ
DownloadVisualize
BU of 1myz by Molmil
CO COMPLEX OF MYOGLOBIN MB-YQR AT RT SOLVED FROM LAUE DATA.
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Bourgeois, D, Vallone, B, Schotte, F, Arcovito, A, Miele, A.E, Sciara, G, Wulff, M, Anfinrud, P, Brunori, M.
Deposit date:2002-10-04
Release date:2003-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography.
Proc.Natl.Acad.Sci.USA, 100, 2003
1MZ0
DownloadVisualize
BU of 1mz0 by Molmil
STRUCTURE OF MYOGLOBIN MB-YQR 316 ns AFTER PHOTOLYSIS OF CARBON MONOXIDE SOLVED FROM LAUE DATA AT RT.
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Bourgeois, D, Vallone, B, Schotte, F, Arcovito, A, Miele, A.E, Sciara, G, Wulff, M, Anfinrud, P, Brunori, M.
Deposit date:2002-10-04
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography.
Proc.Natl.Acad.Sci.USA, 100, 2003
1A3N
DownloadVisualize
BU of 1a3n by Molmil
DEOXY HUMAN HEMOGLOBIN
Descriptor: HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Tame, J, Vallone, B.
Deposit date:1998-01-22
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structures of deoxy human haemoglobin and the mutant Hb Tyralpha42His at 120 K.
Acta Crystallogr.,Sect.D, 56, 2000
1A3O
DownloadVisualize
BU of 1a3o by Molmil
ARTIFICIAL MUTANT (ALPHA Y42H) OF DEOXY HEMOGLOBIN
Descriptor: HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Tame, J, Vallone, B.
Deposit date:1998-01-22
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structures of deoxy human haemoglobin and the mutant Hb Tyralpha42His at 120 K.
Acta Crystallogr.,Sect.D, 56, 2000
2VRY
DownloadVisualize
BU of 2vry by Molmil
Mouse Neuroglobin with heme iron in the reduced ferrous state
Descriptor: NEUROGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Arcovito, A, Moschetti, T, D'Angelo, P, Mancini, G, Vallone, B, Brunori, M, Della Longa, S.
Deposit date:2008-04-16
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:An X-Ray Diffraction and X-Ray Absorption Spectroscopy Joint Study of Neuroglobin.
Arch.Biochem.Biophys., 475, 2008
3GK9
DownloadVisualize
BU of 3gk9 by Molmil
Crystal structure of murine Ngb under Xe pressure
Descriptor: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Moschetti, T, Mueller, U, Schultze, J, Brunori, M, Vallone, B.
Deposit date:2009-03-10
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of neuroglobin at high Xe and Kr pressure reveals partial conservation of globin internal cavities.
Biophys. J., 97, 2009
3GKT
DownloadVisualize
BU of 3gkt by Molmil
Crystal structure of murine neuroglobin under Kr pressure
Descriptor: KRYPTON, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Moschetti, T, Mueller, U, Schultze, J, Brunori, M, Vallone, B.
Deposit date:2009-03-11
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The structure of neuroglobin at high Xe and Kr pressure reveals partial conservation of globin internal cavities.
Biophys. J., 97, 2009
3GLN
DownloadVisualize
BU of 3gln by Molmil
Carbonmonoxy Ngb under Xenon pressure
Descriptor: CARBON MONOXIDE, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Moschetti, T, Mueller, U, Schultze, J, Brunori, M, Vallone, B.
Deposit date:2009-03-12
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The structure of neuroglobin at high Xe and Kr pressure reveals partial conservation of globin internal cavities.
Biophys. J., 97, 2009
3IF9
DownloadVisualize
BU of 3if9 by Molmil
Crystal structure of Glycine Oxidase G51S/A54R/H244A mutant in complex with inhibitor glycolate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCOLIC ACID, Glycine oxidase
Authors:Pedotti, M, Rosini, E, Molla, G, Moschetti, T, Vallone, B, Savino, C, Pollegioni, L.
Deposit date:2009-07-24
Release date:2009-10-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glyphosate resistance by engineering the flavoenzyme glycine oxidase.
J.Biol.Chem., 284, 2009
5N9X
DownloadVisualize
BU of 5n9x by Molmil
Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, ligand bound structure
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylation domain, MAGNESIUM ION, ...
Authors:Savino, C, Vallone, B, Scaglione, A, Parisi, G, Montemiglio, L.C, Fullone, M.R, Grgurina, I.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity.
FEBS J., 284, 2017
5N9W
DownloadVisualize
BU of 5n9w by Molmil
Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, apo structure
Descriptor: ACETATE ION, Adenylation domain
Authors:Savino, C, Vallone, B, Scaglione, A, Parisi, G, Montemiglio, L.C, Fullone, M.R, Grgurina, I.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.456 Å)
Cite:Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity.
FEBS J., 284, 2017
5O17
DownloadVisualize
BU of 5o17 by Molmil
Crystal structure of murine neuroglobin under 100 bar krypton
Descriptor: KRYPTON, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Colloc'h, N, Prange, T, Vallone, B, Carpentier, P.
Deposit date:2017-05-18
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping Hydrophobic Tunnels and Cavities in Neuroglobin with Noble Gas under Pressure.
Biophys. J., 113, 2017
2JJP
DownloadVisualize
BU of 2jjp by Molmil
Structure of cytochrome P450 EryK in complex with inhibitor ketoconazole (KC)
Descriptor: 1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE, CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
2JJO
DownloadVisualize
BU of 2jjo by Molmil
Structure of cytochrome P450 EryK in complex with its natural substrate erD
Descriptor: CYTOCHROME P450 113A1, Erythromycin D, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2JJN
DownloadVisualize
BU of 2jjn by Molmil
Structure of closed cytochrome P450 EryK
Descriptor: CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon