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7FGE
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BU of 7fge by Molmil
A naturally-occurring neuraminidase-inhibitors-resistant NA from asiatic toad influenza B-like virus
Descriptor: 3-(1-ACETYLAMINO-2-ETHYL-BUTYL)-4-GUANIDINO-2-HYDROXY-CYCLOPENTANECARBOXYLIC ACID, CALCIUM ION, toad NA (PER)
Authors:Chai, Y, Wu, Y, Gao, F.
Deposit date:2021-07-26
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7FGD
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BU of 7fgd by Molmil
A naturally-occurring neuraminidase-inhibitors-resistant NA from asiatic toad influenza B-like virus
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, toad NA (OSE)
Authors:Chai, Y, Wu, Y, Gao, F.
Deposit date:2021-07-26
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W26
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BU of 7w26 by Molmil
monolignol ferulate transferase
Descriptor: Ferulate monolignol transferase
Authors:Xi, L, Shuliu, D, Yue, F, Yi, Z.
Deposit date:2021-11-22
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of the plant feruloyl-coenzyme A monolignol transferase provides insights into the formation of monolignol ferulate conjugates.
Biochem.Biophys.Res.Commun., 594, 2022
7EQ2
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BU of 7eq2 by Molmil
Crystal structure of GDP-bound Rab1a-T75D
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, COBALT HEXAMMINE(III), ...
Authors:Cao, Y.L, Gu, D.D, Gao, S.
Deposit date:2021-04-28
Release date:2022-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55090284 Å)
Cite:Aurora kinase A-mediated phosphorylation triggers structural alteration of Rab1A to enhance ER complexity during mitosis
Nat.Struct.Mol.Biol., 2024
5YMU
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BU of 5ymu by Molmil
Functional and structural characterization of P[19] rotavirus VP8* interaction with histo-blood group antigens
Descriptor: GLYCEROL, Outer capsid protein VP4
Authors:Sun, X, Duan, Z.
Deposit date:2017-10-22
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s.
J. Virol., 92, 2018
5YLS
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BU of 5yls by Molmil
Crystal structure of T2R-TTL-Y50 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, E-3-(3-azanyl-4-methoxy-phenyl)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)prop-2-en-1-one, ...
Authors:Yang, J.H, Chen, L.J.
Deposit date:2017-10-18
Release date:2018-04-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 293, 2018
5YLJ
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BU of 5ylj by Molmil
Crystal structure of T2R-TTL-Millepachine complex
Descriptor: (E)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)-3-(4-methoxyphenyl)prop-2-en-1-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yang, J.H, Chen, L.J.
Deposit date:2017-10-17
Release date:2018-04-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 293, 2018
5YMT
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BU of 5ymt by Molmil
Functional and structural characterization of P[19] rotavirus VP8* interaction with histo-blood group antigens
Descriptor: Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Sun, X, Duan, Z.
Deposit date:2017-10-22
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s.
J. Virol., 92, 2018
5YMS
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BU of 5yms by Molmil
Structural basis of glycan specificity and identification of a novel glycan binding cavity in human P[19] rotavirus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Sun, X, Dandi, L, Duan, Z.
Deposit date:2017-10-22
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s.
J. Virol., 92, 2018
5ZHG
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BU of 5zhg by Molmil
Human group C rotavirus VP8*s recognize type A histo-blood group antigens as ligands
Descriptor: Outer capsid protein VP8*
Authors:Sun, X, Duan, Z.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Human Group C Rotavirus VP8*s Recognize Type A Histo-Blood Group Antigens as Ligands.
J. Virol., 92, 2018
5ZHO
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BU of 5zho by Molmil
Human group C rotavirus VP8*s recognize type A histo-blood group antigens as ligands
Descriptor: Outer capsid protein VP8*, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
Authors:Sun, X, Duan, Z, Qi, J.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Human Group C Rotavirus VP8*s Recognize Type A Histo-Blood Group Antigens as Ligands.
J. Virol., 92, 2018
7YED
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BU of 7yed by Molmil
In situ structure of polymerase complex of mammalian reovirus in the elongation state
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Lambda-2 protein, MAGNESIUM ION, ...
Authors:Bao, K.Y, Zhang, X.L, Li, D.Y, Zhu, P.
Deposit date:2022-07-05
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:In situ structures of polymerase complex of mammalian reovirus illuminate RdRp activation and transcription regulation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YEZ
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BU of 7yez by Molmil
In situ structure of polymerase complex of mammalian reovirus in the reloaded state
Descriptor: Lambda-2 protein, Mu-2 protein, RNA helicase, ...
Authors:Bao, K.Y, Zhang, X.L, Li, D.Y, Zhu, P.
Deposit date:2022-07-06
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:In situ structures of polymerase complex of mammalian reovirus illuminate RdRp activation and transcription regulation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YEV
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BU of 7yev by Molmil
In situ structure of polymerase complex of mammalian reovirus in the pre-elongation state
Descriptor: Lambda-2 protein, Mu-2 protein, RNA helicase, ...
Authors:Bao, K.Y, Zhang, X.L, Li, D.Y, Zhu, P.
Deposit date:2022-07-06
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of polymerase complex of mammalian reovirus illuminate RdRp activation and transcription regulation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YF0
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BU of 7yf0 by Molmil
In situ structure of polymerase complex of mammalian reovirus in the core
Descriptor: Lambda-2 protein, Mu-2 protein, RNA helicase, ...
Authors:Bao, K.Y, Zhang, X.L, Li, D.Y, Zhu, P.
Deposit date:2022-07-07
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:In situ structures of polymerase complex of mammalian reovirus illuminate RdRp activation and transcription regulation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YFE
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BU of 7yfe by Molmil
In situ structure of polymerase complex of mammalian reovirus in virion
Descriptor: Lambda-2 protein, Mu-2 protein, RNA (5'-R(P*AP*CP*GP*AP*UP*UP*AP*GP*C)-3'), ...
Authors:Bao, K.Y, Zhang, X.L, Li, D.Y, Zhu, P.
Deposit date:2022-07-08
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:In situ structures of polymerase complex of mammalian reovirus illuminate RdRp activation and transcription regulation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TPR
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BU of 7tpr by Molmil
Camel nanobodies 7A3 and 8A2 broadly neutralize SARS-CoV-2 variants
Descriptor: Nanobody 7A3, Nanobody 8A2, Spike glycoprotein
Authors:Butay, K.J, Zhu, J, Dandey, V.P, Hong, J, Kwon, H.J, Chen, C.Z, Duan, Z, Li, D, Ren, H, Liang, T, Martin, N, Esposito, D, Ortega-Rodriguez, U, Xu, M, Xie, H, Ho, M, Cachau, R, Borgnia, M.J.
Deposit date:2022-01-25
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Camel nanobodies broadly neutralize SARS-CoV-2 variants
bioRxiv, 2021
7TLA
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BU of 7tla by Molmil
Down-state locked rS2d SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 1
Descriptor: Spike glycoprotein
Authors:Henderson, R, Acharya, P.
Deposit date:2022-01-18
Release date:2022-02-02
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TLC
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BU of 7tlc by Molmil
Down-state locked, S2 stabilized rS2d-HexaPro SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 1
Descriptor: Spike glycoprotein
Authors:Henderson, R, Acharya, P.
Deposit date:2022-01-18
Release date:2022-02-02
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TLD
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BU of 7tld by Molmil
Down-state locked, S2 stabilized rS2d-HexaPro SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 2
Descriptor: Spike glycoprotein
Authors:Henderson, R, Acharya, P.
Deposit date:2022-01-18
Release date:2022-02-02
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TOY
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BU of 7toy by Molmil
Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D6 state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Gobeil, S, Acharya, P.
Deposit date:2022-01-24
Release date:2022-02-09
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TP9
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BU of 7tp9 by Molmil
Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D13 state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Gobeil, S, Acharya, P.
Deposit date:2022-01-25
Release date:2022-02-09
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TLB
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BU of 7tlb by Molmil
Down-state locked rS2d SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 2
Descriptor: Spike glycoprotein
Authors:Henderson, R, Acharya, P.
Deposit date:2022-01-18
Release date:2022-02-02
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TOU
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BU of 7tou by Molmil
Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; consensus state D1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Gobeil, S, Acharya, P.
Deposit date:2022-01-24
Release date:2022-02-09
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TP7
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BU of 7tp7 by Molmil
Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D11 state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Gobeil, S, Acharya, P.
Deposit date:2022-01-25
Release date:2022-02-09
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022

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PDB entries from 2024-05-22

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